FFCP PHASE1:Hg19::chr4:140480434..140480439,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:140480434..140480439,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr4:140480434..140480439,+ | |description=CAGE_peak_at_chr4:140480434..140480439,+ | ||
|id=chr4:140480434..140480439,+ | |id=chr4:140480434..140480439,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15 | |||
|ontology_enrichment_disease=DOID:169!8.48e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,6.76e-18,11 | |||
|ontology_enrichment_uberon=UBERON:0001154!2.58e-34!1;UBERON:0001153!2.58e-34!1;UBERON:0002146!3.61e-34!1;UBERON:0005623!3.61e-34!1;UBERON:0002363!9.85e-34!1;UBERON:0007647!9.85e-34!1;UBERON:0010115!9.85e-34!1;UBERON:0002360!1.27e-17!2;UBERON:0000094!1.27e-17!2;UBERON:0007645!1.27e-17!2;UBERON:0003978!2.31e-12!3;UBERON:0009751!2.31e-12!3;UBERON:0000946!2.31e-12!3;UBERON:0002523!2.31e-12!3;UBERON:0005983!2.31e-12!3;UBERON:0002165!2.31e-12!3;UBERON:0002062!2.31e-12!3;UBERON:0007280!2.31e-12!3;UBERON:0002342!2.08e-10!14;UBERON:0005062!2.08e-10!14;UBERON:0004907!5.73e-08!5;UBERON:0000013!6.55e-08!5;UBERON:0002410!6.55e-08!5;UBERON:0000966!7.01e-08!5;UBERON:0005388!7.01e-08!5;UBERON:0001802!7.01e-08!5 | |ontology_enrichment_uberon=UBERON:0001154!2.58e-34!1;UBERON:0001153!2.58e-34!1;UBERON:0002146!3.61e-34!1;UBERON:0005623!3.61e-34!1;UBERON:0002363!9.85e-34!1;UBERON:0007647!9.85e-34!1;UBERON:0010115!9.85e-34!1;UBERON:0002360!1.27e-17!2;UBERON:0000094!1.27e-17!2;UBERON:0007645!1.27e-17!2;UBERON:0003978!2.31e-12!3;UBERON:0009751!2.31e-12!3;UBERON:0000946!2.31e-12!3;UBERON:0002523!2.31e-12!3;UBERON:0005983!2.31e-12!3;UBERON:0002165!2.31e-12!3;UBERON:0002062!2.31e-12!3;UBERON:0007280!2.31e-12!3;UBERON:0002342!2.08e-10!14;UBERON:0005062!2.08e-10!14;UBERON:0004907!5.73e-08!5;UBERON:0000013!6.55e-08!5;UBERON:0002410!6.55e-08!5;UBERON:0000966!7.01e-08!5;UBERON:0005388!7.01e-08!5;UBERON:0001802!7.01e-08!5 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:140480434..140480439,+ | |short_description=p@chr4:140480434..140480439,+ | ||
}} | }} |
Latest revision as of 01:46, 30 July 2015
Short description: | p@chr4:140480434..140480439, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:140480434..140480439, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.76e-18 | 11 |