FFCP PHASE1:Hg19::chr4:157480114..157480124,+: Difference between revisions
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|id=chr4:157480114..157480124,+
|short_description=p@chr4:157480114..157480124,+
|description=CAGE_peak_at_chr4:157480114..157480124,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:157480114..157480124,+ | |||
|coexpression_cluster_id=C4383 | |||
|description=CAGE_peak_at_chr4:157480114..157480124,+ | |||
|id=chr4:157480114..157480124,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1115!9.20e-15!20 | |||
|ontology_enrichment_disease_v019=DOID:5409;2.53e-11;4!DOID:1115;6.55e-09;20!DOID:1325;5.08e-07;7!DOID:3904;5.08e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.53e-11,4;DOID:1115,6.42e-09,20;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.26e-11;4!UBERON:0000923;3.26e-11;4!UBERON:0010316;3.26e-11;4!UBERON:0005291;3.26e-11;4!UBERON:0002050;3.10e-09;5!UBERON:0005423;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:157480114..157480124,+ | |||
}} | }} |
Latest revision as of 02:40, 30 July 2015
Short description: | p@chr4:157480114..157480124, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:157480114..157480124, + |
Coexpression cluster: | C4383_small_glioma_neuroectodermal_rhabdomyosarcoma_tenocyte_osteosarcoma_leiomyoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.53e-11 | 4 |
sarcoma | 6.42e-09 | 20 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |