FFCP PHASE1:Hg19::chr4:178083004..178083050,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:178083004..178083050,- | |||
|coexpression_cluster_id=C2454 | |coexpression_cluster_id=C2454 | ||
|description=CAGE_peak_at_chr4:178083004..178083050,- | |description=CAGE_peak_at_chr4:178083004..178083050,- | ||
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|ontology_enrichment_celltype=CL:0002617!2.36e-15!2;CL:0000136!8.25e-12!15;CL:0002504!4.51e-10!3;CL:1000279!4.51e-10!3;CL:1000280!4.51e-10!3;CL:0002616!1.05e-08!1;CL:0002561!1.88e-08!1;CL:0002598!3.57e-08!1;CL:0002620!3.02e-07!23 | |ontology_enrichment_celltype=CL:0002617!2.36e-15!2;CL:0000136!8.25e-12!15;CL:0002504!4.51e-10!3;CL:1000279!4.51e-10!3;CL:1000280!4.51e-10!3;CL:0002616!1.05e-08!1;CL:0002561!1.88e-08!1;CL:0002598!3.57e-08!1;CL:0002620!3.02e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002616;3.05e-34;1!CL:0000136;1.39e-23;13!CL:0002617;7.05e-18;2!CL:0002561;1.17e-17;2!CL:0002579;1.85e-12;3!CL:0002615;2.59e-12;3!CL:0002590;3.06e-12;3!CL:0002559;7.25e-08;5 | |ontology_enrichment_celltype_v019=CL:0002616;3.05e-34;1!CL:0000136;1.39e-23;13!CL:0002617;7.05e-18;2!CL:0002561;1.17e-17;2!CL:0002579;1.85e-12;3!CL:0002615;2.59e-12;3!CL:0002590;3.06e-12;3!CL:0002559;7.25e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002616,2.58e-34,1;CL:0000136,1.47e-20,15;CL:0002617,7.67e-18,2;CL:0002561,1.27e-17,2;CL:0002579,1.85e-12,3;CL:0002615,2.59e-12,3;CL:0002590,2.89e-12,3;CL:0002559,7.49e-08,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!1.75e-08!1;UBERON:0008811!1.75e-08!1;UBERON:0006258!1.75e-08!1;UBERON:0005876!1.75e-08!1;UBERON:0004874!1.75e-08!1;UBERON:0005933!1.88e-08!1;UBERON:0005942!1.88e-08!1;UBERON:0005932!1.88e-08!1;UBERON:0000310!5.48e-07!10 | |ontology_enrichment_uberon=UBERON:0000989!1.75e-08!1;UBERON:0008811!1.75e-08!1;UBERON:0006258!1.75e-08!1;UBERON:0005876!1.75e-08!1;UBERON:0004874!1.75e-08!1;UBERON:0005933!1.88e-08!1;UBERON:0005942!1.88e-08!1;UBERON:0005932!1.88e-08!1;UBERON:0000310!5.48e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.86e-23;6!UBERON:0002358;4.86e-23;6!UBERON:0003684;4.86e-23;6!UBERON:0001178;4.86e-23;6!UBERON:0005406;7.05e-18;2!UBERON:0005933;1.17e-17;2!UBERON:0005942;1.17e-17;2!UBERON:0005932;1.17e-17;2!UBERON:0004457;9.73e-16;9!UBERON:0000042;9.73e-16;9!UBERON:0002073;7.25e-08;5!UBERON:0005284;7.25e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0003688;4.86e-23;6!UBERON:0002358;4.86e-23;6!UBERON:0003684;4.86e-23;6!UBERON:0001178;4.86e-23;6!UBERON:0005406;7.05e-18;2!UBERON:0005933;1.17e-17;2!UBERON:0005942;1.17e-17;2!UBERON:0005932;1.17e-17;2!UBERON:0004457;9.73e-16;9!UBERON:0000042;9.73e-16;9!UBERON:0002073;7.25e-08;5!UBERON:0005284;7.25e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.86e-23,6;UBERON:0002358,4.86e-23,6;UBERON:0003684,4.86e-23,6;UBERON:0001178,4.86e-23,6;UBERON:0005406,6.48e-18,2;UBERON:0005933,1.27e-17,2;UBERON:0005942,1.27e-17,2;UBERON:0005932,1.27e-17,2;UBERON:0004457,4.54e-12,12;UBERON:0000042,4.54e-12,12;UBERON:0005284,7.01e-08,5;UBERON:0002073,7.49e-08,5;UBERON:0005086,7.49e-08,5 | |||
|phase1_expression=3.08853244759946,0.428201047781966,2.53717927372748,0,0,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0,0,0,0.368199594569197,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0,7.04765320906355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5250415513906,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=3.08853244759946,0.428201047781966,2.53717927372748,0,0,3.48935409640147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0,0,0,0.368199594569197,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0,0,7.04765320906355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5250415513906,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:178083004..178083050,- | |short_description=p@chr4:178083004..178083050,- | ||
}} | }} |
Latest revision as of 03:40, 30 July 2015
Short description: | p@chr4:178083004..178083050, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:178083004..178083050, - |
Coexpression cluster: | C2454_Preadipocyte_Adipocyte_mesenchymal_Fibroblast_Ewing_Sertoli_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 2.58e-34 | 1 |
fat cell | 1.47e-20 | 15 |
adipocyte of breast | 7.67e-18 | 2 |
outer root sheath cell | 1.27e-17 | 2 |
omentum preadipocyte | 1.85e-12 | 3 |
adipocyte of omentum tissue | 2.59e-12 | 3 |
smooth muscle cell of the brain vasculature | 2.89e-12 | 3 |
hair follicle cell | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.86e-23 | 6 |
peritoneum | 4.86e-23 | 6 |
abdominal cavity | 4.86e-23 | 6 |
visceral peritoneum | 4.86e-23 | 6 |
perirenal fat | 6.48e-18 | 2 |
hair root sheath | 1.27e-17 | 2 |
hair outer root sheath | 1.27e-17 | 2 |
bulb of hair follicle | 1.27e-17 | 2 |
cavity lining | 4.54e-12 | 12 |
serous membrane | 4.54e-12 | 12 |
brain vasculature | 7.01e-08 | 5 |
hair follicle | 7.49e-08 | 5 |
hair follicle placode | 7.49e-08 | 5 |