FFCP PHASE1:Hg19::chr4:188593907..188593912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-112bp_to_ENST00000507817_5end | |association_with_transcript=-112bp_to_ENST00000507817_5end | ||
|cluster_id=chr4:188593907..188593912,- | |||
|description=CAGE_peak_1_at_ENST00000507817_5end | |description=CAGE_peak_1_at_ENST00000507817_5end | ||
|id=chr4:188593907..188593912,- | |id=chr4:188593907..188593912,- | ||
|ontology_enrichment_celltype=CL:0002178!9.03e-08!3;CL:0002573!2.13e-07!2;CL:0000243!3.60e-07!15;CL:0000125!3.60e-07!15;CL:0000030!3.60e-07!15;CL:0000339!3.60e-07!15 | |ontology_enrichment_celltype=CL:0002178!9.03e-08!3;CL:0002573!2.13e-07!2;CL:0000243!3.60e-07!15;CL:0000125!3.60e-07!15;CL:0000030!3.60e-07!15;CL:0000339!3.60e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000319;3.26e-12;1!CL:0000082;1.38e-09;19!CL:1000415;4.69e-07;2!CL:0000054;6.80e-07;2!CL:0000137;6.80e-07;2!CL:0000092;6.80e-07;2!CL:0000159;9.81e-07;2 | |ontology_enrichment_celltype_v019=CL:0000319;3.26e-12;1!CL:0000082;1.38e-09;19!CL:1000415;4.69e-07;2!CL:0000054;6.80e-07;2!CL:0000137;6.80e-07;2!CL:0000092;6.80e-07;2!CL:0000159;9.81e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.31e-12,1;CL:0000082,1.30e-09,19;CL:1000415,4.83e-07,2;CL:0000054,7.20e-07,2;CL:0000137,7.20e-07,2;CL:0000092,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.69e-10;5!UBERON:0006238;1.47e-09;10 | |ontology_enrichment_development_v019=UBERON:0007123;5.69e-10;5!UBERON:0006238;1.47e-09;10 | ||
|ontology_enrichment_disease=DOID:14566!6.63e-17!239;DOID:162!7.07e-15!235;DOID:0050687!9.11e-12!143;DOID:1909!1.64e-10!2;DOID:305!7.55e-10!106;DOID:299!3.79e-09!25;DOID:0050615!7.06e-08!16;DOID:0050686!9.69e-08!137 | |ontology_enrichment_disease=DOID:14566!6.63e-17!239;DOID:162!7.07e-15!235;DOID:0050687!9.11e-12!143;DOID:1909!1.64e-10!2;DOID:305!7.55e-10!106;DOID:299!3.79e-09!25;DOID:0050615!7.06e-08!16;DOID:0050686!9.69e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:0050615;3.52e-17;16!DOID:4960;9.92e-13;1!DOID:0070004;9.92e-13;1!DOID:0060085;1.57e-12;1!DOID:3165;1.57e-12;1!DOID:0060121;1.57e-12;1!DOID:2438;1.57e-12;1!DOID:4418;1.57e-12;1!DOID:3112;1.57e-12;1!DOID:0050619;3.26e-12;1!DOID:3030;3.26e-12;1!DOID:1357;3.26e-12;1!DOID:1324;4.38e-12;15!DOID:3905;1.15e-11;9!DOID:299;4.48e-11;25!DOID:3908;6.80e-10;5!DOID:3093;8.31e-09;11!DOID:1325;2.60e-07;7!DOID:3904;2.60e-07;7!DOID:3910;4.69e-07;2!DOID:200;6.80e-07;2!DOID:4305;6.80e-07;2 | |ontology_enrichment_disease_v019=DOID:0050615;3.52e-17;16!DOID:4960;9.92e-13;1!DOID:0070004;9.92e-13;1!DOID:0060085;1.57e-12;1!DOID:3165;1.57e-12;1!DOID:0060121;1.57e-12;1!DOID:2438;1.57e-12;1!DOID:4418;1.57e-12;1!DOID:3112;1.57e-12;1!DOID:0050619;3.26e-12;1!DOID:3030;3.26e-12;1!DOID:1357;3.26e-12;1!DOID:1324;4.38e-12;15!DOID:3905;1.15e-11;9!DOID:299;4.48e-11;25!DOID:3908;6.80e-10;5!DOID:3093;8.31e-09;11!DOID:1325;2.60e-07;7!DOID:3904;2.60e-07;7!DOID:3910;4.69e-07;2!DOID:200;6.80e-07;2!DOID:4305;6.80e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0050615,3.41e-17,16;DOID:4960,8.85e-13,1;DOID:0070004,8.85e-13,1;DOID:3112,1.25e-12,1;DOID:0060085,1.75e-12,1;DOID:3165,1.75e-12,1;DOID:0060121,1.75e-12,1;DOID:2438,1.75e-12,1;DOID:4418,1.75e-12,1;DOID:0050619,3.85e-12,1;DOID:1357,3.85e-12,1;DOID:1324,4.08e-12,15;DOID:3030,4.31e-12,1;DOID:3905,9.79e-12,9;DOID:162,2.35e-11,235;DOID:14566,4.51e-11,239;DOID:299,4.63e-11,25;DOID:3908,6.22e-10,5;DOID:0050686,7.42e-10,137;DOID:3093,8.31e-09,11;DOID:305,2.16e-07,106;DOID:1325,2.37e-07,7;DOID:3904,2.37e-07,7;DOID:3910,4.56e-07,2;DOID:200,7.20e-07,2;DOID:4305,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000945!2.79e-10!8;UBERON:0010039!2.79e-10!8;UBERON:0000473!1.06e-09!8;UBERON:0003135!4.42e-07!11 | |ontology_enrichment_uberon=UBERON:0000945!2.79e-10!8;UBERON:0010039!2.79e-10!8;UBERON:0000473!1.06e-09!8;UBERON:0003135!4.42e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.26e-12;1!UBERON:0001825;3.26e-12;1!UBERON:0002046;5.69e-10;5!UBERON:0000945;7.60e-10;5!UBERON:0010039;7.60e-10;5!UBERON:0004802;1.38e-09;19!UBERON:0000115;1.38e-09;19!UBERON:0002048;2.64e-08;22!UBERON:0004807;2.64e-08;22!UBERON:0000117;2.64e-08;22!UBERON:0000171;2.64e-08;22!UBERON:0000170;2.64e-08;22!UBERON:0004903;4.69e-07;2!UBERON:0002173;4.69e-07;2!UBERON:0002186;4.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001764;3.26e-12;1!UBERON:0001825;3.26e-12;1!UBERON:0002046;5.69e-10;5!UBERON:0000945;7.60e-10;5!UBERON:0010039;7.60e-10;5!UBERON:0004802;1.38e-09;19!UBERON:0000115;1.38e-09;19!UBERON:0002048;2.64e-08;22!UBERON:0004807;2.64e-08;22!UBERON:0000117;2.64e-08;22!UBERON:0000171;2.64e-08;22!UBERON:0000170;2.64e-08;22!UBERON:0004903;4.69e-07;2!UBERON:0002173;4.69e-07;2!UBERON:0002186;4.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.85e-12,1;UBERON:0001825,3.85e-12,1;UBERON:0002046,5.44e-10,5;UBERON:0004117,5.44e-10,5;UBERON:0007689,5.44e-10,5;UBERON:0007123,5.44e-10,5;UBERON:0003091,5.44e-10,5;UBERON:0004802,1.30e-09,19;UBERON:0000115,1.30e-09,19;UBERON:0002048,2.52e-08,22;UBERON:0000117,2.52e-08,22;UBERON:0000171,2.52e-08,22;UBERON:0000170,2.52e-08,22;UBERON:0005597,2.52e-08,22;UBERON:0000118,2.52e-08,22;UBERON:0004903,4.56e-07,2;UBERON:0002173,4.56e-07,2;UBERON:0002186,4.56e-07,2 | |||
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|short_description=p1@ENST00000507817 | |short_description=p1@ENST00000507817 | ||
}} | }} |
Latest revision as of 04:11, 30 July 2015
Short description: | p1@ENST00000507817 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000507817_5end |
Coexpression cluster: | NA |
Association with transcript: | -112bp_to_ENST00000507817_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.31e-12 | 1 |
epithelial cell of lung | 1.30e-09 | 19 |
epithelial cell of gall bladder | 4.83e-07 | 2 |
bone matrix secreting cell | 7.20e-07 | 2 |
osteocyte | 7.20e-07 | 2 |
osteoclast | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.85e-12 | 1 |
paranasal sinus | 3.85e-12 | 1 |
thyroid gland | 5.44e-10 | 5 |
pharyngeal pouch | 5.44e-10 | 5 |
thyroid diverticulum | 5.44e-10 | 5 |
pharyngeal pouch 2 | 5.44e-10 | 5 |
thyroid primordium | 5.44e-10 | 5 |
respiratory tract epithelium | 1.30e-09 | 19 |
lung epithelium | 1.30e-09 | 19 |
lung | 2.52e-08 | 22 |
respiratory tube | 2.52e-08 | 22 |
respiration organ | 2.52e-08 | 22 |
pair of lungs | 2.52e-08 | 22 |
lung primordium | 2.52e-08 | 22 |
lung bud | 2.52e-08 | 22 |
bronchoalveolar duct junction | 4.56e-07 | 2 |
alveolar duct | 4.56e-07 | 2 |
bronchiole | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 3.41e-17 | 16 |
bone marrow cancer | 8.85e-13 | 1 |
myeloma | 8.85e-13 | 1 |
papillary adenocarcinoma | 1.25e-12 | 1 |
organ system benign neoplasm | 1.75e-12 | 1 |
skin benign neoplasm | 1.75e-12 | 1 |
integumentary system benign neoplasm | 1.75e-12 | 1 |
dermis tumor | 1.75e-12 | 1 |
cutaneous fibrous histiocytoma | 1.75e-12 | 1 |
paranasal sinus cancer | 3.85e-12 | 1 |
maxillary sinus cancer | 3.85e-12 | 1 |
lung cancer | 4.08e-12 | 15 |
mucinous adenocarcinoma | 4.31e-12 | 1 |
lung carcinoma | 9.79e-12 | 9 |
cancer | 2.35e-11 | 235 |
disease of cellular proliferation | 4.51e-11 | 239 |
adenocarcinoma | 4.63e-11 | 25 |
non-small cell lung carcinoma | 6.22e-10 | 5 |
organ system cancer | 7.42e-10 | 137 |
nervous system cancer | 8.31e-09 | 11 |
carcinoma | 2.16e-07 | 106 |
bronchus cancer | 2.37e-07 | 7 |
bronchogenic carcinoma | 2.37e-07 | 7 |
lung adenocarcinoma | 4.56e-07 | 2 |
giant cell tumor | 7.20e-07 | 2 |
bone giant cell tumor | 7.20e-07 | 2 |