FFCP PHASE1:Hg19::chr6:106975163..106975184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:106975163..106975184,+ | |||
|coexpression_cluster_id=C1740 | |coexpression_cluster_id=C1740 | ||
|description=CAGE_peak_at_chr6:106975163..106975184,+ | |description=CAGE_peak_at_chr6:106975163..106975184,+ | ||
|id=chr6:106975163..106975184,+ | |id=chr6:106975163..106975184,+ | ||
|ontology_enrichment_celltype=CL:0002371!2.72e-11!591;CL:0000548!1.15e-10!679;CL:0000004!1.15e-10!679;CL:0000255!1.15e-10!679;CL:0002368!1.30e-10!13;CL:0002076!1.90e-10!43;CL:0000012!1.95e-10!682;CL:0000144!1.55e-09!625;CL:0002159!1.11e-08!13;CL:0000220!1.24e-08!246;CL:0000003!1.48e-08!722;CL:0002321!2.01e-08!248;CL:0000063!2.35e-08!578;CL:0000066!3.83e-08!254;CL:0000076!5.70e-08!62 | |ontology_enrichment_celltype=CL:0002371!2.72e-11!591;CL:0000548!1.15e-10!679;CL:0000004!1.15e-10!679;CL:0000255!1.15e-10!679;CL:0002368!1.30e-10!13;CL:0002076!1.90e-10!43;CL:0000012!1.95e-10!682;CL:0000144!1.55e-09!625;CL:0002159!1.11e-08!13;CL:0000220!1.24e-08!246;CL:0000003!1.48e-08!722;CL:0002321!2.01e-08!248;CL:0000063!2.35e-08!578;CL:0000066!3.83e-08!254;CL:0000076!5.70e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.05e-30;13!CL:0002159;1.22e-22;14!CL:0002076;1.88e-22;42!CL:0002621;9.31e-17;3!CL:0002166;6.45e-16;3!CL:0000307;8.98e-16;3!CL:0000362;1.46e-14;9!CL:0000240;5.86e-14;6!CL:0000311;5.86e-14;6!CL:0000079;5.86e-14;6!CL:0000237;5.86e-14;6!CL:0002202;1.25e-13;9!CL:0002632;1.25e-13;9!CL:0000317;9.55e-12;2!CL:1000448;9.55e-12;2!CL:0002308;9.55e-12;2!CL:0002140;9.55e-12;2!CL:0000622;4.54e-10;5!CL:0000312;4.82e-10;5!CL:0002077;9.32e-10;34!CL:0000154;1.84e-08;6!CL:0002231;1.27e-07;3!CL:0002328;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,5.05e-30,13;CL:0002076,2.04e-27,42;CL:0002159,1.02e-22,14;CL:0000223,7.24e-19,58;CL:0002621,9.33e-17,3;CL:0002166,4.64e-16,3;CL:0000068,1.16e-15,3;CL:0000069,1.16e-15,3;CL:0000307,1.16e-15,3;CL:0000377,1.16e-15,3;CL:0000362,1.46e-14,9;CL:0000240,4.96e-14,6;CL:0000311,4.96e-14,6;CL:0000079,4.96e-14,6;CL:0000237,4.96e-14,6;CL:0000036,4.96e-14,6;CL:0000357,4.96e-14,6;CL:0000114,4.96e-14,6;CL:0002202,1.69e-13,9;CL:0002632,1.69e-13,9;CL:0002321,7.71e-13,250;CL:0000317,8.17e-12,2;CL:1000448,8.17e-12,2;CL:0002308,8.17e-12,2;CL:0002140,8.17e-12,2;CL:0002077,7.01e-11,34;CL:0000066,8.52e-11,253;CL:0000622,4.27e-10,5;CL:0000312,5.29e-10,5;CL:0000154,1.75e-08,6;CL:0002231,1.58e-07,3;CL:0002328,2.67e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;8.98e-16;3!CL:0000357;5.86e-14;6!CL:0000114;5.86e-14;6!CL:0000223;1.51e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!7.90e-08!14 | |ontology_enrichment_disease=DOID:2394!7.90e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!1.13e-07!41;UBERON:0000161!4.28e-07!35 | |ontology_enrichment_uberon=UBERON:0003100!1.13e-07!41;UBERON:0000161!4.28e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.31e-17;3!UBERON:0001708;4.57e-12;4!UBERON:0008895;4.57e-12;4!UBERON:0002419;9.55e-12;2!UBERON:0007771;9.55e-12;2!UBERON:0003297;9.55e-12;2!UBERON:0001821;9.55e-12;2!UBERON:0003487;9.55e-12;2!UBERON:0001820;9.55e-12;2!UBERON:0011159;9.52e-10;5!UBERON:0010371;1.27e-09;31!UBERON:0001003;1.28e-08;15!UBERON:0007376;1.28e-08;15!UBERON:0007196;4.41e-08;15!UBERON:0001558;4.41e-08;15!UBERON:0003929;1.98e-07;7!UBERON:0004815;2.19e-07;3!UBERON:0002031;2.19e-07;3!UBERON:0003126;5.04e-07;7!UBERON:0001005;5.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,9.33e-17,3;UBERON:0001708,3.57e-12,4;UBERON:0008895,3.57e-12,4;UBERON:0002419,8.17e-12,2;UBERON:0007771,8.17e-12,2;UBERON:0003297,8.17e-12,2;UBERON:0001821,8.17e-12,2;UBERON:0003487,8.17e-12,2;UBERON:0001820,8.17e-12,2;UBERON:0005089,8.17e-12,2;UBERON:0005088,8.17e-12,2;UBERON:0011159,7.84e-10,5;UBERON:0003102,9.04e-10,99;UBERON:0001004,5.78e-09,74;UBERON:0001003,1.28e-08,15;UBERON:0007376,1.28e-08,15;UBERON:0007383,1.28e-08,15;UBERON:0010188,2.89e-08,6;UBERON:0002539,2.89e-08,6;UBERON:0008816,2.89e-08,6;UBERON:0007196,5.24e-08,15;UBERON:0001558,5.24e-08,15;UBERON:0004815,2.67e-07,3;UBERON:0002031,2.67e-07,3;UBERON:0003126,5.59e-07,7;UBERON:0001005,5.59e-07,7 | |||
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|short_description=p@chr6:106975163..106975184,+ | |short_description=p@chr6:106975163..106975184,+ | ||
}} | }} |
Latest revision as of 17:59, 30 July 2015
Short description: | p@chr6:106975163..106975184, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:106975163..106975184, + |
Coexpression cluster: | C1740_Keratinocyte_Mammary_Mallassezderived_Gingival_Small_Sebocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 9.33e-17 | 3 |
jaw skeleton | 3.57e-12 | 4 |
splanchnocranium | 3.57e-12 | 4 |
skin gland | 8.17e-12 | 2 |
epidermis gland | 8.17e-12 | 2 |
gland of integumental system | 8.17e-12 | 2 |
sebaceous gland | 8.17e-12 | 2 |
skin sebaceous gland | 8.17e-12 | 2 |
sweat gland | 8.17e-12 | 2 |
sweat gland placode | 8.17e-12 | 2 |
sebaceous gland placode | 8.17e-12 | 2 |
primary subdivision of cranial skeletal system | 7.84e-10 | 5 |
surface structure | 9.04e-10 | 99 |
respiratory system | 5.78e-09 | 74 |
skin epidermis | 1.28e-08 | 15 |
outer epithelium | 1.28e-08 | 15 |
enveloping layer of ectoderm | 1.28e-08 | 15 |
protuberance | 2.89e-08 | 6 |
pharyngeal arch | 2.89e-08 | 6 |
embryonic head | 2.89e-08 | 6 |
tracheobronchial tree | 5.24e-08 | 15 |
lower respiratory tract | 5.24e-08 | 15 |
lower respiratory tract epithelium | 2.67e-07 | 3 |
epithelium of bronchus | 2.67e-07 | 3 |
trachea | 5.59e-07 | 7 |
respiratory airway | 5.59e-07 | 7 |