FFCP PHASE1:Hg19::chr6:106975193..106975220,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:106975193..106975220,+ | |||
|coexpression_cluster_id=C1740 | |||
|description=CAGE_peak_at_chr6:106975193..106975220,+ | |||
|id=chr6:106975193..106975220,+ | |||
|ontology_enrichment_celltype=CL:0002371!5.25e-16!591;CL:0000144!1.91e-14!625;CL:0000548!1.41e-12!679;CL:0000004!1.41e-12!679;CL:0000255!1.41e-12!679;CL:0000012!2.69e-12!682;CL:0000680!9.78e-11!57;CL:0000056!9.78e-11!57;CL:0000355!9.78e-11!57;CL:0000220!3.40e-10!246;CL:0002321!6.15e-10!248;CL:0000003!8.87e-10!722;CL:0002159!2.05e-09!13;CL:0000187!4.80e-09!54;CL:0002368!4.96e-09!13;CL:0000183!2.46e-08!59;CL:0002076!9.48e-08!43;CL:0000393!2.37e-07!60;CL:0000211!2.37e-07!60;CL:0000192!6.95e-07!42;CL:0000514!6.95e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.25e-26;14!CL:0002368;2.64e-23;13!CL:0002076;6.84e-17;42!CL:0002621;4.20e-13;3!CL:0002166;1.11e-12;3!CL:0002328;2.16e-12;3!CL:0002077;2.42e-12;34!CL:0000362;2.32e-11;9!CL:0000240;2.58e-11;6!CL:0000311;2.58e-11;6!CL:0000079;2.58e-11;6!CL:0000237;2.58e-11;6!CL:0002202;1.07e-10;9!CL:0002632;1.07e-10;9!CL:0002327;1.13e-09;4!CL:0000317;4.53e-09;2!CL:1000448;4.53e-09;2!CL:0002308;4.53e-09;2!CL:0002140;4.53e-09;2!CL:0000312;3.47e-08;5!CL:0000575;3.49e-08;2!CL:0000622;9.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,2.00e-26,14;CL:0002368,2.52e-23,13;CL:0002076,1.94e-20,42;CL:0002077,4.20e-14,34;CL:0000223,9.93e-14,58;CL:0002621,4.38e-13,3;CL:0002166,1.28e-12,3;CL:0002321,1.94e-12,250;CL:0002328,2.20e-12,3;CL:0000066,1.26e-11,253;CL:0000362,2.25e-11,9;CL:0000240,2.42e-11,6;CL:0000311,2.42e-11,6;CL:0000079,2.42e-11,6;CL:0000237,2.42e-11,6;CL:0000036,2.42e-11,6;CL:0000357,2.42e-11,6;CL:0000114,2.42e-11,6;CL:0002202,1.05e-10,9;CL:0002632,1.05e-10,9;CL:0002327,8.94e-10,4;CL:0000317,4.72e-09,2;CL:1000448,4.72e-09,2;CL:0002308,4.72e-09,2;CL:0002140,4.72e-09,2;CL:0000312,3.27e-08,5;CL:0000575,6.10e-08,2;CL:0000622,9.80e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000357;2.58e-11;6!CL:0000114;2.58e-11;6!CL:0000223;5.54e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.93e-14!82;UBERON:0000914!2.27e-13!83;UBERON:0002329!2.27e-13!83;UBERON:0003077!2.27e-13!83;UBERON:0003059!2.27e-13!83;UBERON:0007282!2.27e-13!83;UBERON:0009618!2.27e-13!83;UBERON:0007285!2.27e-13!83;UBERON:0004290!6.35e-12!70;UBERON:0003102!1.71e-09!95;UBERON:0002385!1.80e-09!63;UBERON:0001015!1.80e-09!63;UBERON:0000383!1.80e-09!63;UBERON:0001134!1.98e-09!61;UBERON:0002036!1.98e-09!61;UBERON:0003082!1.98e-09!61;UBERON:0000490!2.81e-07!138;UBERON:0001981!3.68e-07!60;UBERON:0007500!3.68e-07!60;UBERON:0004537!3.68e-07!60;UBERON:0006965!3.68e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.20e-13;3!UBERON:0004815;2.16e-12;3!UBERON:0002031;2.16e-12;3!UBERON:0001911;1.13e-09;4!UBERON:0001708;1.29e-09;4!UBERON:0008895;1.29e-09;4!UBERON:0002419;4.53e-09;2!UBERON:0007771;4.53e-09;2!UBERON:0003297;4.53e-09;2!UBERON:0001821;4.53e-09;2!UBERON:0003487;4.53e-09;2!UBERON:0001820;4.53e-09;2!UBERON:0000486;5.83e-08;12!UBERON:0011159;9.04e-08;5!UBERON:0002185;1.33e-07;5!UBERON:0010371;3.65e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.38e-13,3;UBERON:0004815,2.20e-12,3;UBERON:0002031,2.20e-12,3;UBERON:0001911,8.94e-10,4;UBERON:0005333,8.94e-10,4;UBERON:0008425,8.94e-10,4;UBERON:0005311,8.94e-10,4;UBERON:0003102,1.05e-09,99;UBERON:0001708,1.43e-09,4;UBERON:0008895,1.43e-09,4;UBERON:0002419,4.72e-09,2;UBERON:0007771,4.72e-09,2;UBERON:0003297,4.72e-09,2;UBERON:0001821,4.72e-09,2;UBERON:0003487,4.72e-09,2;UBERON:0001820,4.72e-09,2;UBERON:0005089,4.72e-09,2;UBERON:0005088,4.72e-09,2;UBERON:0011159,9.80e-08,5;UBERON:0005157,1.22e-07,47;UBERON:0002185,1.35e-07,5;UBERON:0005153,5.69e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,5.51652734687356,2.71085326900425,2.58827807116751,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,1.11235332835329,0.324547393654683,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,1.10298924103761,0,0.17859945656816,0.22452937262617,0,0,0.949265659568129,0.549605231791222,0,0,0.872188104285069,0,0.379891534993739,0.662045904066094,0,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0.896692083310806,1.996386476944,0.485618833104395,0.421352420106746,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.375355559615893,0.277064115484183,0,0,0,0.226864366320042,0,0,0.211931901159562,0,0.309157587715317,0,0,0.168776332241266,0,0,0.184099797284599,0.161646056818812,0,0,0.339121184620975,6.57086900755209,5.45492241181669,9.75135624322613,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,12.5115325365833,6.74410519545717,14.4761720272748,3.24059558054854,0,0,0,0,0,0,0,0,0,0,0,0,0,12.185398418281,2.18376766658517,3.68615252830205,10.1201130654219,14.2410629871841,1.91691339582606,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0.112131084345361,0,0,0.129271715757778,0,5.917119267892,0,0,0,0,0,0,0,0,5.86325131728723,0,0.791951872933429,0,0,0,0,0,0,0,0,0,1.15825045334063,0.821905290201534,0.179060963239896,0,0,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0.410635780069046,0,0.232420756919918,0,2.20557117333613,4.14364450211533,0.803701137152247,1.63882051206045,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59412430396938,5.20048196829217,0,0.580024309752732,0.770243085573222,0.307007349452259,0.827019434907183,0.107420244868274,0.580066775656914,0.93749290157711,0,11.5699440752685,6.53446229041361,6.50824833722379,2.93357564481095,1.39453664789186,0.94443704049192,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,0,1.86062352764589,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0.404364963146632,1.58510321173008,0,0,0,0,0.136499911407986,0.424216295861138,0,0,2.65375590096488,2.63070531152258,0.578775534266688,0,0.202910376962704,0.92947049429925,0,0.143411352204052,0.0982490410131212,0,1.06428319221179,0,0,0,0,4.52243929809907,2.68120910214315,0,0,0.86101074534246,1.68471475667626,0,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,4.44001953560053,0,0.171986032471617,0.580537987734511,0.438535902517113,0.246346371159628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93928624098468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64180283175561,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0.686520205190771,0.453692771289717,0.621748802331122,0.73927574994817,1.43367090447332,0,0.310525913752519,0.829412415681711,0,0.521745061811734,0,0.761610424337591,0.406870733204662,0.363697318405119,0.537052785212442,0.464033759878494,1.19428766609585,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0.979156554036111,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.808679663052368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354581522651905,0.444925607568277,0,0,0,0,0.215927591218621,0,0,0,0,0,0,3.10824246244555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:106975193..106975220,+ | |||
}} |
Latest revision as of 17:59, 30 July 2015
Short description: | p@chr6:106975193..106975220, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:106975193..106975220, + |
Coexpression cluster: | C1740_Keratinocyte_Mammary_Mallassezderived_Gingival_Small_Sebocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 2.00e-26 | 14 |
respiratory epithelial cell | 2.52e-23 | 13 |
endo-epithelial cell | 1.94e-20 | 42 |
ecto-epithelial cell | 4.20e-14 | 34 |
endodermal cell | 9.93e-14 | 58 |
gingival epithelial cell | 4.38e-13 | 3 |
epithelial cell of Malassez | 1.28e-12 | 3 |
embryonic cell | 1.94e-12 | 250 |
bronchial epithelial cell | 2.20e-12 | 3 |
epithelial cell | 1.26e-11 | 253 |
epidermal cell | 2.25e-11 | 9 |
stratified squamous epithelial cell | 2.42e-11 | 6 |
keratin accumulating cell | 2.42e-11 | 6 |
stratified epithelial cell | 2.42e-11 | 6 |
keratinizing barrier epithelial cell | 2.42e-11 | 6 |
epithelial fate stem cell | 2.42e-11 | 6 |
stratified epithelial stem cell | 2.42e-11 | 6 |
surface ectodermal cell | 2.42e-11 | 6 |
epithelial cell of tracheobronchial tree | 1.05e-10 | 9 |
epithelial cell of lower respiratory tract | 1.05e-10 | 9 |
mammary gland epithelial cell | 8.94e-10 | 4 |
sebum secreting cell | 4.72e-09 | 2 |
epithelial cell of sweat gland | 4.72e-09 | 2 |
epithelial cell of skin gland | 4.72e-09 | 2 |
acinar cell of sebaceous gland | 4.72e-09 | 2 |
keratinocyte | 3.27e-08 | 5 |
corneal epithelial cell | 6.10e-08 | 2 |
acinar cell | 9.80e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.38e-13 | 3 |
lower respiratory tract epithelium | 2.20e-12 | 3 |
epithelium of bronchus | 2.20e-12 | 3 |
mammary gland | 8.94e-10 | 4 |
mammary bud | 8.94e-10 | 4 |
mammary ridge | 8.94e-10 | 4 |
mammary placode | 8.94e-10 | 4 |
surface structure | 1.05e-09 | 99 |
jaw skeleton | 1.43e-09 | 4 |
splanchnocranium | 1.43e-09 | 4 |
skin gland | 4.72e-09 | 2 |
epidermis gland | 4.72e-09 | 2 |
gland of integumental system | 4.72e-09 | 2 |
sebaceous gland | 4.72e-09 | 2 |
skin sebaceous gland | 4.72e-09 | 2 |
sweat gland | 4.72e-09 | 2 |
sweat gland placode | 4.72e-09 | 2 |
sebaceous gland placode | 4.72e-09 | 2 |
primary subdivision of cranial skeletal system | 9.80e-08 | 5 |
epithelial fold | 1.22e-07 | 47 |
bronchus | 1.35e-07 | 5 |
epithelial bud | 5.69e-07 | 37 |