FFCP PHASE1:Hg19::chr6:136336050..136336056,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:136336050..136336056,- | |||
|coexpression_cluster_id=C2844 | |||
|description=CAGE_peak_at_chr6:136336050..136336056,- | |description=CAGE_peak_at_chr6:136336050..136336056,- | ||
|id=chr6:136336050..136336056,- | |id=chr6:136336050..136336056,- | ||
|ontology_enrichment_celltype=CL:0000359!1.02e-10!32;CL:0000569!1.09e-10!4;CL:0000011!1.09e-10!4;CL:0000192!1.20e-08!42;CL:0000514!1.20e-08!42;CL:0000055!1.41e-07!180;CL:0000057!1.97e-07!75;CL:0000187!7.68e-07!54 | |ontology_enrichment_celltype=CL:0000359!1.02e-10!32;CL:0000569!1.09e-10!4;CL:0000011!1.09e-10!4;CL:0000192!1.20e-08!42;CL:0000514!1.20e-08!42;CL:0000055!1.41e-07!180;CL:0000057!1.97e-07!75;CL:0000187!7.68e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000569;7.64e-22;4!CL:0002195;1.86e-20;2!CL:0002571;1.86e-20;2!CL:0002582;1.09e-13;3!CL:1000306;1.10e-10;4!CL:0002547;1.10e-10;4!CL:0000723;8.98e-09;61!CL:0000134;2.30e-08;55!CL:0000048;6.48e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,6.62e-22,4;CL:0000011,6.62e-22,4;CL:0002195,2.05e-20,2;CL:0002571,2.05e-20,2;CL:0002582,8.44e-14,3;CL:1000306,1.10e-10,4;CL:0002547,1.10e-10,4;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000011;7.64e-22;4!UBERON:0003099;1.33e-10;1!UBERON:0003852;1.33e-10;1 | |||
|ontology_enrichment_disease=DOID:2394!3.77e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!3.17e-08!9;UBERON:0001637!1.10e-07!42;UBERON:0003509!1.10e-07!42;UBERON:0004572!1.10e-07!42;UBERON:0004872!6.90e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.10e-10;4!UBERON:0000415;1.10e-10;4!UBERON:0007240;1.10e-10;4!UBERON:0005742;1.10e-10;4!UBERON:0005734;1.10e-10;4!UBERON:0004664;1.10e-10;4!UBERON:0004663;1.10e-10;4!UBERON:0005705;1.33e-10;1!UBERON:0008193;1.33e-10;1!UBERON:0010912;1.33e-10;1!UBERON:0002514;1.33e-10;1!UBERON:0003457;1.33e-10;1!UBERON:0008907;1.33e-10;1!UBERON:0008001;1.33e-10;1!UBERON:0007213;1.33e-10;1!UBERON:0009891;1.33e-10;1!UBERON:0007914;1.33e-10;1!UBERON:0007375;1.33e-10;1!UBERON:0003323;1.33e-10;1!UBERON:0010258;1.33e-10;1!UBERON:0005253;1.33e-10;1!UBERON:0007842;1.33e-10;1!UBERON:0002397;1.33e-10;1!UBERON:0003113;1.33e-10;1!UBERON:0003277;1.33e-10;1!UBERON:0001709;1.33e-10;1!UBERON:0002244;1.33e-10;1!UBERON:0005620;1.33e-10;1!UBERON:0010364;1.33e-10;1!UBERON:0004288;1.33e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,9.97e-11,1;UBERON:0008193,9.97e-11,1;UBERON:0010912,9.97e-11,1;UBERON:0002514,9.97e-11,1;UBERON:0003457,9.97e-11,1;UBERON:0008907,9.97e-11,1;UBERON:0008001,9.97e-11,1;UBERON:0007213,9.97e-11,1;UBERON:0009891,9.97e-11,1;UBERON:0007914,9.97e-11,1;UBERON:0009292,9.97e-11,1;UBERON:0003099,9.97e-11,1;UBERON:0007375,9.97e-11,1;UBERON:0003323,9.97e-11,1;UBERON:0010258,9.97e-11,1;UBERON:0007842,9.97e-11,1;UBERON:0009494,9.97e-11,1;UBERON:0010042,9.97e-11,1;UBERON:0010045,9.97e-11,1;UBERON:0010259,9.97e-11,1;UBERON:0010359,9.97e-11,1;UBERON:0009526,9.97e-11,1;UBERON:0002397,9.97e-11,1;UBERON:0003113,9.97e-11,1;UBERON:0003277,9.97e-11,1;UBERON:0001709,9.97e-11,1;UBERON:0004066,9.97e-11,1;UBERON:0002244,9.97e-11,1;UBERON:0005620,9.97e-11,1;UBERON:0004362,9.97e-11,1;UBERON:0010364,9.97e-11,1;UBERON:0010046,9.97e-11,1;UBERON:0005868,9.97e-11,1;UBERON:0007238,9.97e-11,1;UBERON:0004288,9.97e-11,1;UBERON:0004068,9.97e-11,1;UBERON:0010334,9.97e-11,1;UBERON:0003852,9.97e-11,1;UBERON:0010253,9.97e-11,1;UBERON:0000415,1.10e-10,4;UBERON:0007240,1.10e-10,4;UBERON:0005742,1.10e-10,4;UBERON:0005734,1.10e-10,4;UBERON:0004664,1.10e-10,4;UBERON:0004663,1.10e-10,4;UBERON:0003914,9.97e-07,117 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51577443545116,12.0471380714502,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.30648779579902,0.300476117813194,0.453728732640084,2.51145489964407,0.213557388818567,0,0,0,0.772921620136887,0.18611685633159,0,0,2.01947019395292,0,0,2.84007674013291,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,3.57444984145369,0,0,0.325736184293735,3.55391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0.462629081407967,0.710246901252508,2.95657761649713,0,2.5566283261191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,30.5367976425721,0.6970372701606,0,0,0.869932992075073,0.37064843820784,0.715624433709956,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,4.4457519183256,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.597019211547496,2.33713309847224,0.554805861502613,0.757612021100357,0.754703705257725,0,0.915360273587694,6.956622493109,1.5543720058278,1.33069634990671,0,0,0,3.7323558705677,0.53168342911599,0,0.150257608997218,0,0,1.27294061441792,0,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51577443545116,12.0471380714502,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0.30648779579902,0.300476117813194,0.453728732640084,2.51145489964407,0.213557388818567,0,0,0,0.772921620136887,0.18611685633159,0,0,2.01947019395292,0,0,2.84007674013291,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.473227200159376,0.505754070234305,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,3.57444984145369,0,0,0.325736184293735,3.55391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0,0,0.462629081407967,0.710246901252508,2.95657761649713,0,2.5566283261191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,30.5367976425721,0.6970372701606,0,0,0.869932992075073,0.37064843820784,0.715624433709956,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,4.4457519183256,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.597019211547496,2.33713309847224,0.554805861502613,0.757612021100357,0.754703705257725,0,0.915360273587694,6.956622493109,1.5543720058278,1.33069634990671,0,0,0,3.7323558705677,0.53168342911599,0,0.150257608997218,0,0,1.27294061441792,0,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76337971845342,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:136336050..136336056,- | |short_description=p@chr6:136336050..136336056,- | ||
}} | }} |
Latest revision as of 19:49, 30 July 2015
Short description: | p@chr6:136336050..136336056, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:136336050..136336056, - |
Coexpression cluster: | C2844_Smooth_mesenchymal_Fibroblast_Preadipocyte_H9_Mesenchymal_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 6.62e-22 | 4 |
migratory trunk neural crest cell | 6.62e-22 | 4 |
hepatic stem cell | 2.05e-20 | 2 |
hepatic mesenchymal stem cell | 2.05e-20 | 2 |
visceral preadipocyte | 8.44e-14 | 3 |
fibroblast of tunica adventitia of artery | 1.10e-10 | 4 |
fibroblast of the aortic adventitia | 1.10e-10 | 4 |
multi fate stem cell | 7.57e-07 | 427 |