FFCP PHASE1:Hg19::chr6:148514598..148514612,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:148514598..148514612,+ | |||
|coexpression_cluster_id=C2847 | |||
|description=CAGE_peak_at_chr6:148514598..148514612,+ | |description=CAGE_peak_at_chr6:148514598..148514612,+ | ||
|id=chr6:148514598..148514612,+ | |id=chr6:148514598..148514612,+ | ||
|ontology_enrichment_celltype=CL:0000622!7.11e-15!5;CL:0000154!2.52e-12!6;CL:0000150!3.61e-11!9;CL:0002076!1.18e-10!43;CL:0002623!1.27e-09!3;CL:0002621!2.38e-09!3;CL:0002251!2.55e-07!21;CL:0002536!2.65e-07!2;CL:0002327!5.24e-07!4;CL:0000317!6.23e-07!2;CL:1000448!6.23e-07!2;CL:0002308!6.23e-07!2;CL:0002140!6.23e-07!2;CL:0000223!7.46e-07!59 | |ontology_enrichment_celltype=CL:0000622!7.11e-15!5;CL:0000154!2.52e-12!6;CL:0000150!3.61e-11!9;CL:0002076!1.18e-10!43;CL:0002623!1.27e-09!3;CL:0002621!2.38e-09!3;CL:0002251!2.55e-07!21;CL:0002536!2.65e-07!2;CL:0002327!5.24e-07!4;CL:0000317!6.23e-07!2;CL:1000448!6.23e-07!2;CL:0002308!6.23e-07!2;CL:0002140!6.23e-07!2;CL:0000223!7.46e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002536;1.12e-25;2!CL:0000349;4.76e-23;19!CL:0002537;1.44e-22;5!CL:0002623;8.05e-18;3!CL:0000622;4.44e-11;5!CL:0000154;2.21e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,8.70e-26,2;CL:0000349,4.16e-23,19;CL:0002537,1.34e-22,5;CL:0002623,9.94e-18,3;CL:0000622,5.03e-11,5;CL:0000154,2.45e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.65e-14;1!UBERON:0008814;1.36e-07;2!UBERON:0010056;1.36e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;3.08e-14;1!DOID:3350;9.25e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.08e-14,1;DOID:3350,9.25e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.15e-12!14;UBERON:0000158!1.15e-12!14;UBERON:0000166!5.94e-12!21;UBERON:0000305!5.20e-11!7;UBERON:0004871!1.42e-09!8;UBERON:0001949!2.38e-09!3;UBERON:0005795!5.15e-09!22;UBERON:0000161!5.31e-09!35;UBERON:0000165!1.98e-08!28;UBERON:0000930!1.98e-08!28;UBERON:0000995!1.80e-07!21;UBERON:0003100!2.77e-07!41;UBERON:0001987!3.38e-07!4;UBERON:0004340!3.38e-07!4;UBERON:0003975!4.56e-07!22;UBERON:0001911!5.24e-07!4;UBERON:0005333!5.24e-07!4;UBERON:0008425!5.24e-07!4;UBERON:0005311!5.24e-07!4;UBERON:0002419!6.23e-07!2;UBERON:0007771!6.23e-07!2;UBERON:0003297!6.23e-07!2;UBERON:0001821!6.23e-07!2;UBERON:0003487!6.23e-07!2;UBERON:0001820!6.23e-07!2;UBERON:0005089!6.23e-07!2;UBERON:0005088!6.23e-07!2;UBERON:0000478!9.37e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.38e-43;7!UBERON:0005631;1.45e-30;10!UBERON:0000158;1.45e-30;10!UBERON:0000478;3.35e-18;24!UBERON:0001723;1.79e-17;3!UBERON:0001033;1.79e-17;3!UBERON:0001041;1.44e-14;14!UBERON:0001044;2.21e-09;6!UBERON:0003293;2.21e-09;6!UBERON:0003294;2.21e-09;6!UBERON:0010047;2.21e-09;6!UBERON:0003408;2.21e-09;6!UBERON:0000167;2.21e-09;6!UBERON:0000165;2.13e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.06e-43,7;UBERON:0004871,2.89e-38,8;UBERON:0005631,2.02e-31,14;UBERON:0000158,2.02e-31,14;UBERON:0000478,3.01e-18,24;UBERON:0001723,2.30e-17,3;UBERON:0001033,2.30e-17,3;UBERON:0010056,2.30e-17,3;UBERON:0001044,2.45e-09,6;UBERON:0003293,2.45e-09,6;UBERON:0003294,2.45e-09,6;UBERON:0010047,2.45e-09,6;UBERON:0000167,2.45e-09,6;UBERON:0000166,2.61e-09,22;UBERON:0000165,4.15e-07,29;UBERON:0000930,4.15e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.83973783769224,1.84636884759917,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.447792613514241,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,1.48482340416319,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,8.6442721452734,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0,0,11.1790921106551,0,0,0,2.90967049465258,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,3.0729325876911,2.07377898544228,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,1.46067277649303,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0,0,2.39488422686657,1.02669990325584,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.83973783769224,1.84636884759917,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.447792613514241,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,3.32870879020994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,1.48482340416319,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,8.6442721452734,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0,0,11.1790921106551,0,0,0,2.90967049465258,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,3.0729325876911,2.07377898544228,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,1.46067277649303,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0.112131862580613,0,0,2.39488422686657,1.02669990325584,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr6:148514598..148514612,+ | |short_description=p@chr6:148514598..148514612,+ | ||
}} | }} |
Latest revision as of 20:41, 30 July 2015
Short description: | p@chr6:148514598..148514612, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:148514598..148514612, + |
Coexpression cluster: | C2847_epithelioid_cervical_esophagus_tongue_Placental_salivary_acantholytic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 8.70e-26 | 2 |
extraembryonic cell | 4.16e-23 | 19 |
amnion mesenchymal stem cell | 1.34e-22 | 5 |
acinar cell of salivary gland | 9.94e-18 | 3 |
acinar cell | 5.03e-11 | 5 |
protein secreting cell | 2.45e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.06e-43 | 7 |
somatic layer of lateral plate mesoderm | 2.89e-38 | 8 |
extraembryonic membrane | 2.02e-31 | 14 |
membranous layer | 2.02e-31 | 14 |
extraembryonic structure | 3.01e-18 | 24 |
tongue | 2.30e-17 | 3 |
gustatory system | 2.30e-17 | 3 |
future tongue | 2.30e-17 | 3 |
saliva-secreting gland | 2.45e-09 | 6 |
gland of oral region | 2.45e-09 | 6 |
gland of foregut | 2.45e-09 | 6 |
oral gland | 2.45e-09 | 6 |
oral cavity | 2.45e-09 | 6 |
oral opening | 2.61e-09 | 22 |
mouth | 4.15e-07 | 29 |
stomodeum | 4.15e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.08e-14 | 1 |
mesenchymal cell neoplasm | 9.25e-08 | 2 |