FFCP PHASE1:Hg19::chr6:169616977..169617034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:169616977..169617034,- | |||
|coexpression_cluster_id=C604 | |||
|description=CAGE_peak_at_chr6:169616977..169617034,- | |description=CAGE_peak_at_chr6:169616977..169617034,- | ||
|id=chr6:169616977..169617034,- | |id=chr6:169616977..169617034,- | ||
|ontology_enrichment_celltype=CL:0000055!2.46e-33!180;CL:0000057!9.13e-20!75;CL:0000187!9.19e-18!54;CL:0000680!1.29e-17!57;CL:0000056!1.29e-17!57;CL:0000355!1.29e-17!57;CL:0000393!4.88e-16!60;CL:0000211!4.88e-16!60;CL:0000192!1.04e-14!42;CL:0000514!1.04e-14!42;CL:0000183!1.25e-14!59;CL:0000359!2.10e-12!32;CL:0002334!1.03e-09!12;CL:0000222!4.43e-08!119;CL:0000723!4.70e-07!436;CL:0000048!9.60e-07!430 | |ontology_enrichment_celltype=CL:0000055!2.46e-33!180;CL:0000057!9.13e-20!75;CL:0000187!9.19e-18!54;CL:0000680!1.29e-17!57;CL:0000056!1.29e-17!57;CL:0000355!1.29e-17!57;CL:0000393!4.88e-16!60;CL:0000211!4.88e-16!60;CL:0000192!1.04e-14!42;CL:0000514!1.04e-14!42;CL:0000183!1.25e-14!59;CL:0000359!2.10e-12!32;CL:0002334!1.03e-09!12;CL:0000222!4.43e-08!119;CL:0000723!4.70e-07!436;CL:0000048!9.60e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.51e-13;12!CL:0000359;1.92e-13;32!CL:0000192;2.86e-12;43!CL:0000187;5.54e-10;55!CL:0000134;8.60e-10;55!CL:0000393;1.62e-08;61!CL:0000211;1.62e-08;61!CL:0000048;2.25e-08;58!CL:0002494;3.68e-08;16!CL:0000723;6.60e-08;61!CL:0000057;1.84e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.49e-20,76;CL:0000723,4.91e-18,433;CL:0000187,3.88e-17,55;CL:0000048,4.42e-17,427;CL:0000034,5.93e-17,441;CL:0000680,1.12e-16,58;CL:0000056,1.12e-16,58;CL:0000355,1.12e-16,58;CL:0000192,5.95e-16,43;CL:0000514,5.95e-16,43;CL:0000359,2.72e-14,32;CL:0000393,2.87e-14,61;CL:0000211,2.87e-14,61;CL:0002334,1.91e-13,12;CL:0000222,1.05e-09,121;CL:0002494,2.56e-08,16;CL:0000136,3.53e-08,15;CL:0002320,1.07e-07,361;CL:0000134,4.74e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;2.86e-12;43!CL:0000355;9.42e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!7.94e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.14e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.37e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000486!3.66e-17!82;UBERON:0002385!7.21e-17!63;UBERON:0001015!7.21e-17!63;UBERON:0000383!7.21e-17!63;UBERON:0001134!1.17e-16!61;UBERON:0002036!1.17e-16!61;UBERON:0003082!1.17e-16!61;UBERON:0000914!1.23e-15!83;UBERON:0002329!1.23e-15!83;UBERON:0003077!1.23e-15!83;UBERON:0003059!1.23e-15!83;UBERON:0007282!1.23e-15!83;UBERON:0009618!1.23e-15!83;UBERON:0007285!1.23e-15!83;UBERON:0004290!3.13e-15!70;UBERON:0000475!7.88e-10!365;UBERON:0004573!4.05e-09!33;UBERON:0004571!4.05e-09!33;UBERON:0004872!4.14e-09!84;UBERON:0005256!1.13e-08!143;UBERON:0002199!1.51e-08!45;UBERON:0002416!1.51e-08!45;UBERON:0000948!1.87e-08!24;UBERON:0005498!1.87e-08!24;UBERON:0004140!1.87e-08!24;UBERON:0009881!1.87e-08!24;UBERON:0004141!1.87e-08!24;UBERON:0003084!1.87e-08!24;UBERON:0007005!1.87e-08!24;UBERON:0004139!1.87e-08!24;UBERON:0004291!1.87e-08!24;UBERON:0001637!4.56e-08!42;UBERON:0003509!4.56e-08!42;UBERON:0004572!4.56e-08!42;UBERON:0003102!1.07e-07!95;UBERON:0007100!2.20e-07!27;UBERON:0001013!4.26e-07!14;UBERON:0002100!4.89e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.62e-11;33!UBERON:0004571;2.62e-11;33!UBERON:0004457;6.92e-09;9!UBERON:0000042;6.92e-09;9!UBERON:0003688;1.33e-08;6!UBERON:0002358;1.33e-08;6!UBERON:0003684;1.33e-08;6!UBERON:0001178;1.33e-08;6!UBERON:0001637;1.85e-08;42!UBERON:0003509;1.85e-08;42!UBERON:0004572;1.85e-08;42!UBERON:0001013;5.38e-08;14!UBERON:0002384;6.30e-07;198!UBERON:0002199;9.31e-07;46!UBERON:0002416;9.31e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.30e-15,62;UBERON:0002036,8.30e-15,62;UBERON:0003082,8.30e-15,62;UBERON:0000486,1.42e-14,83;UBERON:0007524,2.62e-14,73;UBERON:0002385,5.73e-14,64;UBERON:0001015,5.73e-14,64;UBERON:0000383,5.73e-14,64;UBERON:0002329,6.54e-14,71;UBERON:0003059,6.54e-14,71;UBERON:0007282,6.54e-14,71;UBERON:0004290,6.54e-14,71;UBERON:0009618,6.54e-14,71;UBERON:0003077,1.53e-13,72;UBERON:0007285,1.53e-13,72;UBERON:0004573,1.09e-12,33;UBERON:0004571,1.09e-12,33;UBERON:0007503,1.48e-11,78;UBERON:0001637,2.43e-11,42;UBERON:0003509,2.43e-11,42;UBERON:0004572,2.43e-11,42;UBERON:0004872,2.34e-10,83;UBERON:0005256,1.03e-09,122;UBERON:0003104,2.85e-09,160;UBERON:0009142,2.85e-09,160;UBERON:0002199,1.23e-08,46;UBERON:0002416,1.23e-08,46;UBERON:0003688,1.34e-08,6;UBERON:0002358,1.34e-08,6;UBERON:0003684,1.34e-08,6;UBERON:0001178,1.34e-08,6;UBERON:0001013,5.13e-08,14;UBERON:0003914,6.19e-08,117;UBERON:0007500,9.96e-08,59;UBERON:0001981,9.96e-08,59;UBERON:0004537,9.96e-08,59;UBERON:0006965,9.96e-08,59;UBERON:0002384,1.24e-07,371;UBERON:0004535,2.04e-07,109;UBERON:0000490,2.39e-07,148;UBERON:0000948,4.14e-07,24;UBERON:0005498,4.14e-07,24;UBERON:0004140,4.14e-07,24;UBERON:0009881,4.14e-07,24;UBERON:0004141,4.14e-07,24;UBERON:0003084,4.14e-07,24;UBERON:0007005,4.14e-07,24;UBERON:0004139,4.14e-07,24;UBERON:0004291,4.14e-07,24;UBERON:0001009,6.39e-07,112;UBERON:0000055,7.41e-07,68;UBERON:0002100,7.52e-07,199;UBERON:0002049,8.78e-07,78;UBERON:0007798,8.78e-07,78 | |||
|phase1_expression=14.352591962374,15.8434387679328,16.7735740874206,15.0109947529696,14.3027550216732,39.2552335845166,5.06599756336621,3.15859936713415,1.82829939739887,0.491467873003018,0,0,0,1.60896258848061,1.32558950291166,2.01697543935533,4.82155622419182,7.30310090387373,9.75865597581014,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.01210257911091,5.62595272111533,0,0.50133791063589,2.02785126545153,0,3.89307896242109,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.3697939228987,2.40597972162702,5.42877641334197,28.1099888333837,8.51204117276057,4.48542080113846,0,1.72667283892012,0,1.75123873690594,1.79808093424805,0.756787138224657,6.33793516927999,0,1.24864030732128,0.570471821544449,1.49448680551801,0,0,0,0.61246251376468,0.122834317311768,0.413303124703062,4.75201142912821,17.5559519787775,1.82032272387605,3.59309070908119,0.336672227908132,0,0,0.877955241761676,3.37136575378922,7.66214100423644,1.81491493056034,0.89694817844431,8.75585294156127,2.54318281391474,0.600182192168805,0.515262646192195,3.09168648054755,1.8611685633159,3.20675031258406,0.974370051611986,2.01947019395292,3.40584624976508,2.42469085228218,9.23024940543197,1.81353776809752,1.86516651541536,0.57978255948989,0.545492241181669,1.14721838155602,0.121973706129595,0,0.464775771478074,0.10366105501537,0,0,0,7.71889125831462,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,5.88034845542168,0,0,1.18157981336281,0,0,0.857839051492628,4.82901255797952,2.24803506515239,5.5290934826397,0,0.325808305310325,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.850650583454319,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,1.52795370223311,0,3.4214489204541,0.102827492703324,2.40274446275134,0,0,0.87192013766656,0.07333828582095,5.42941206182667,0,0.845302752556,7.44626726437637,5.2003718455683,0.257207374262142,0,0.266422179016099,2.57360388584666,1.08524321078289,0.823240336780769,2.28015329005615,3.19852753868291,3.16780749173372,0.602878754119172,1.74306691720059,0.799783929456456,0,0,0,1.67737398844108,2.29723871668228,0,0,2.4657158706046,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,1.59498939234882,3.50119364741774,0.271265023699736,12.2702808303176,12.4900292158013,14.1932173530541,7.61419197452636,2.70851489754947,0,0,3.32112799267718,1.29058417979192,4.17041349446798,0,0,0,0,0,0,0,0.30239029332968,16.3751153160393,9.51464234385987,28.6273296321735,25.8841081496516,9.72243773226737,49.2212998699439,8.90508398669946,6.01417805830357,13.3171293984845,1.23190734020714,3.11552657510173,5.92672930145792,0,4.21063587636898,0,2.29628896329214,2.00300284807389,2.22911505431021,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.27470839445503,0.41254749960294,0.574265537996172,1.30012049207304,4.82051789532479,0.96670718292122,1.07834031980251,0.767518373630648,0.275673144969061,1.07420244868274,1.30515024522806,0.93749290157711,3.91740956845644,0.826424576804891,0.768760269460425,0,0,2.32422774648643,11.333244485903,0.6970372701606,3.38836938193698,1.59691809095107,0,2.40921484835096,1.43124886741991,0.744316738719335,5.06207079549961,5.52827562379092,0.767693373934002,2.1396949401696,4.45484547096312,3.92474320099615,2.51821440616641,5.76527762445715,4.00562167975334,0.202182481573316,3.17020642346017,1.68503382495592,0.48763373908959,18.7659387016089,17.9605249486484,1.36499911407986,1.97967604735198,6.78048699721457,2.75682671773062,3.98063385144732,5.26141062304515,2.31510213706675,0,0.811641507850816,0,2.81695602532241,1.86434757865267,2.45622602532803,0,0.354761064070598,2.74439925886963,16.4647446479951,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0.86101074534246,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,2.27308917445131,0,0,0,0,0.140669416410513,0.333926115068718,0,0,2.78947183551498,0.276283915531148,0,0,0,12.4415835064723,0,0,0,0.493217028184668,0,0,2.90799823828566,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.153900517007594,3.98797195464504,0,0,0,0,0.641183153813036,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.337005664903385,0.802577647298789,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,1.20390222730132,0,0,0,0.290967049465258,0,0.90392296312213,0.411125773940253,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,1.76675467895698,1.67364554099733,0,0.866851769704557,0,0,0,3.0083580899397,0,0.837847203816763,0.916641696046735,1.43574604915363,0.599037001496973,0,0,0.335917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| ||
|short_description=p@chr6:169616977..169617034,- | |short_description=p@chr6:169616977..169617034,- | ||
}} | }} |
Latest revision as of 22:15, 30 July 2015
Short description: | p@chr6:169616977..169617034, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:169616977..169617034, - |
Coexpression cluster: | C604_Fibroblast_hepatic_Ewing_Preadipocyte_Smooth_Adipocyte_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.49e-20 | 76 |
somatic stem cell | 4.91e-18 | 433 |
muscle cell | 3.88e-17 | 55 |
multi fate stem cell | 4.42e-17 | 427 |
stem cell | 5.93e-17 | 441 |
muscle precursor cell | 1.12e-16 | 58 |
myoblast | 1.12e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.12e-16 | 58 |
smooth muscle cell | 5.95e-16 | 43 |
smooth muscle myoblast | 5.95e-16 | 43 |
vascular associated smooth muscle cell | 2.72e-14 | 32 |
electrically responsive cell | 2.87e-14 | 61 |
electrically active cell | 2.87e-14 | 61 |
preadipocyte | 1.91e-13 | 12 |
mesodermal cell | 1.05e-09 | 121 |
cardiocyte | 2.56e-08 | 16 |
fat cell | 3.53e-08 | 15 |
connective tissue cell | 1.07e-07 | 361 |
mesenchymal cell | 4.74e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.37e-11 | 14 |