FFCP PHASE1:Hg19::chr6:31239852..31239876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3107 | |EntrezGene=entrezgene:3107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4933 | |HGNC=HGNC:4933 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=P10321,A2AEA2,A2AEA4 | |UniProt=uniprot:P10321,uniprot:A2AEA2,uniprot:A2AEA4 | ||
|association_with_transcript=0bp_to_ENST00000376228,ENST00000383329,ENST00000396254,ENST00000484378,uc003nsy.2,uc003nsz.2,uc003nta.2,uc010jsl.2,uc011dnl.1_5end | |association_with_transcript=0bp_to_ENST00000376228,ENST00000383329,ENST00000396254,ENST00000484378,uc003nsy.2,uc003nsz.2,uc003nta.2,uc010jsl.2,uc011dnl.1_5end | ||
|cluster_id=chr6:31239852..31239876,- | |||
|coexpression_cluster_id=C4591 | |coexpression_cluster_id=C4591 | ||
|description=CAGE_peak_1_at_HLA-C_5end | |description=CAGE_peak_1_at_HLA-C_5end |
Revision as of 23:50, 30 July 2015
Short description: | p1@HLA-C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLA-C_5end |
Coexpression cluster: | C4591_Neutrophils_Basophils_Eosinophils_migratory_CD14_CD4_CD8 |
Association with transcript: | 0bp_to_ENST00000376228, ENST00000383329, ENST00000396254, ENST00000484378, uc003nsy.2, uc003nsz.2, uc003nta.2, uc010jsl.2, uc011dnl.1_5end |
EntrezGene: | 3107 |
HGNC: | 4933 |
UniProt: | P10321A2AEA2A2AEA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@HLA-C |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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leukocyte | 1.45e-28 | 136 |
myeloid leukocyte | 2.76e-26 | 72 |
nongranular leukocyte | 1.44e-23 | 115 |
defensive cell | 2.28e-23 | 48 |
phagocyte | 2.28e-23 | 48 |
hematopoietic lineage restricted progenitor cell | 5.20e-23 | 120 |
classical monocyte | 1.28e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-22 | 42 |
macrophage dendritic cell progenitor | 1.86e-22 | 61 |
granulocyte monocyte progenitor cell | 2.73e-22 | 67 |
Showing 1 to 10 of 26 entries
Ontology term | p-value | n |
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hemolymphoid system | 2.66e-24 | 108 |
hematopoietic system | 2.05e-22 | 98 |
blood island | 2.05e-22 | 98 |
immune system | 7.07e-21 | 93 |
bone marrow | 7.09e-18 | 76 |
bone element | 1.20e-16 | 82 |
lateral plate mesoderm | 2.11e-14 | 203 |
skeletal element | 9.10e-13 | 90 |
skeletal system | 1.62e-10 | 100 |
mesoderm | 2.67e-08 | 315 |
Showing 1 to 10 of 13 entries