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FFCP PHASE1:Hg19::chr6:31239852..31239876,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=3107
|EntrezGene=entrezgene:3107
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=4933
|HGNC=HGNC:4933
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=P10321,A2AEA2,A2AEA4
|UniProt=uniprot:P10321,uniprot:A2AEA2,uniprot:A2AEA4
|association_with_transcript=0bp_to_ENST00000376228,ENST00000383329,ENST00000396254,ENST00000484378,uc003nsy.2,uc003nsz.2,uc003nta.2,uc010jsl.2,uc011dnl.1_5end
|association_with_transcript=0bp_to_ENST00000376228,ENST00000383329,ENST00000396254,ENST00000484378,uc003nsy.2,uc003nsz.2,uc003nta.2,uc010jsl.2,uc011dnl.1_5end
|cluster_id=chr6:31239852..31239876,-
|coexpression_cluster_id=C4591
|coexpression_cluster_id=C4591
|description=CAGE_peak_1_at_HLA-C_5end
|description=CAGE_peak_1_at_HLA-C_5end

Revision as of 23:50, 30 July 2015

Short description:p1@HLA-C
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_HLA-C_5end
Coexpression cluster:C4591_Neutrophils_Basophils_Eosinophils_migratory_CD14_CD4_CD8
Association with transcript: 0bp_to_ENST00000376228, ENST00000383329, ENST00000396254, ENST00000484378, uc003nsy.2, uc003nsz.2, uc003nta.2, uc010jsl.2, uc011dnl.1_5end
EntrezGene:3107
HGNC: 4933
UniProt: P10321A2AEA2A2AEA4
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data