FFCP PHASE1:Hg19::chr6:42096519..42096522,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:42096519..42096522,- | |||
|description=CAGE_peak_at_chr6:42096519..42096522,- | |description=CAGE_peak_at_chr6:42096519..42096522,- | ||
|id=chr6:42096519..42096522,- | |id=chr6:42096519..42096522,- | ||
|ontology_enrichment_celltype=CL:0000066!4.49e-20!254;CL:0002076!5.35e-15!43;CL:0002251!2.20e-10!21;CL:0000223!4.45e-10!59;CL:0000076!5.00e-07!62 | |ontology_enrichment_celltype=CL:0000066!4.49e-20!254;CL:0002076!5.35e-15!43;CL:0002251!2.20e-10!21;CL:0000223!4.45e-10!59;CL:0000076!5.00e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000317;2.51e-14;2!CL:1000448;2.51e-14;2!CL:0002308;2.51e-14;2!CL:0000575;2.51e-14;2!CL:0002140;2.51e-14;2!CL:0002159;9.40e-12;14!CL:0002252;5.20e-08;1!CL:0002076;5.08e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,2.53e-14,2;CL:1000448,2.53e-14,2;CL:0002308,2.53e-14,2;CL:0002140,2.53e-14,2;CL:0000575,3.09e-14,2;CL:0000066,3.67e-13,253;CL:0002159,1.23e-11,14;CL:0002076,3.84e-09,42;CL:0002252,6.19e-08,1;CL:0000076,3.99e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.51e-14;2!UBERON:0010056;2.51e-14;2!UBERON:0009143;5.20e-08;1 | |||
|ontology_enrichment_disease=DOID:305!6.74e-11!106;DOID:0050687!9.50e-08!143;DOID:1749!1.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.44e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.46e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.86e-13!169;UBERON:0000925!1.86e-13!169;UBERON:0006595!1.86e-13!169;UBERON:0001007!1.19e-10!155;UBERON:0001555!1.19e-10!155;UBERON:0007026!1.19e-10!155;UBERON:0000161!1.28e-08!35;UBERON:0005911!4.85e-08!82;UBERON:0003102!2.39e-07!95;UBERON:0004921!2.43e-07!129;UBERON:0004185!2.43e-07!129;UBERON:0001004!2.53e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;2.51e-14;2!UBERON:0007771;2.51e-14;2!UBERON:0003297;2.51e-14;2!UBERON:0001821;2.51e-14;2!UBERON:0003487;2.51e-14;2!UBERON:0001820;2.51e-14;2!UBERON:0001043;7.47e-10;3!UBERON:0001723;7.47e-10;3!UBERON:0001033;7.47e-10;3!UBERON:0000997;5.20e-08;1!UBERON:0004913;5.20e-08;1!UBERON:0005056;5.20e-08;1!UBERON:0003703;5.20e-08;1!UBERON:0004176;5.20e-08;1!UBERON:0001174;5.20e-08;1!UBERON:0004914;5.20e-08;1!UBERON:0000964;1.34e-07;4!UBERON:0010409;1.34e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,2.53e-14,2;UBERON:0007771,2.53e-14,2;UBERON:0003297,2.53e-14,2;UBERON:0001821,2.53e-14,2;UBERON:0003487,2.53e-14,2;UBERON:0001820,2.53e-14,2;UBERON:0005089,2.53e-14,2;UBERON:0005088,2.53e-14,2;UBERON:0001043,6.00e-10,3;UBERON:0009143,6.00e-10,3;UBERON:0001723,6.87e-10,3;UBERON:0001033,6.87e-10,3;UBERON:0010056,6.87e-10,3;UBERON:0000997,2.90e-08,1;UBERON:0005056,2.90e-08,1;UBERON:0004913,5.05e-08,1;UBERON:0003703,5.05e-08,1;UBERON:0001174,5.05e-08,1;UBERON:0004914,5.05e-08,1;UBERON:0000964,1.49e-07,4;UBERON:0010409,1.49e-07,4;UBERON:0004348,1.49e-07,4;UBERON:0005427,1.49e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0,0.982935746006035,2.79120467188971,0.436882744260345,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,2.75826367343678,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0,0.515262646192195,0.257640540045629,0,0,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.339121184620975,0,0.272746120590835,0.573609190778008,0.365921118388786,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0.171567810298526,0.219500570817251,0,0.402115889646523,0.833296006426766,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,1.17587489739202,0.425325291727159,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,1.19967589418468,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.24900292158013,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0,0.561320188866147,0,0,0.321707842287215,0,0,0,0.410635780069046,0,0.116210378459959,0.241718899183244,0.601519410909855,2.3941057123333,0,0,0.393373244878272,1.35359883872224,0.0770153371044148,0,0,0,0,0,0,0,0.541892875087706,1.50506932156456,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0,0,1.14853107599234,1.95018073810956,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0,1.15699440752685,0.768760269460425,0,2.12431339796655,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,1.31717957183961,0,0.349934720244983,0,0,0,0.0941438007767792,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0.988551862620595,0.716084698702437,0,0.197286811273867,0,0,0,0,0,1.30213880542617,0.437299999980979,0,0.1137934482855,0.508507300585533,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.230850775511391,0,0,0.179515288819544,0.325942115766024,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,1.21491816834592,1.7638631534588,1.56706571844725,0,0,0,0,0,1.64881328030313,0,0.90392296312213,0,0,0,0.391102765469606,0.400794101257669,0.213452994739353,0.19980960958213,0.288180834308212,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0.360299883542404,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.321506296930038,0.687697182986169,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.318593534327405,0,0,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0.260994291965212,0.226705925512272,0,0.734210113519403,0,0.308801447160972,0.438568099157414,0.353378291891762,0.578742114812744,0.337884881306145,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.589848616738702,0.366857197043358,1.15525666150338,0,0,0,0,0,0,0,0.818859587550484,1.33070477595341,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0.280272163313789,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0.51215543128185,0.691259661814092,0,0,0,0,1.8328549483524,0,0,0.559277158988962,0.098150233615243,0.365753774946808,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0.301925687133347,0.308696632431779,0.874238242015829,0,0,0,0,0,0,0.169927114687817,0,0,0,0.892769693028288,1.41157948686277,0.240724100067505,1.46067277649303,0,0,0,0,0,0,0,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0.305966489225945,0.534434810531121,1.56221329209236,0.250707539292375,0,0.267964130156178,0,0,0.852935927603924,0,0,0.0620747142958579,0.112131862580613,0.318235791390825,0.404234377916439,1.95945073107265,0.684466602170562,0.673520530145875,0.0717222053926763,0.665320713092027,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0,0.982935746006035,2.79120467188971,0.436882744260345,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,2.75826367343678,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0.213557388818567,0.211931901159562,0,0.515262646192195,0.257640540045629,0,0,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.339121184620975,0,0.272746120590835,0.573609190778008,0.365921118388786,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0.171567810298526,0.219500570817251,0,0.402115889646523,0.833296006426766,0,0,0,0,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,1.17587489739202,0.425325291727159,0.447792613514241,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0,0,1.19967589418468,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,1.24900292158013,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0,0.561320188866147,0,0,0.321707842287215,0,0,0,0.410635780069046,0,0.116210378459959,0.241718899183244,0.601519410909855,2.3941057123333,0,0,0.393373244878272,1.35359883872224,0.0770153371044148,0,0,0,0,0,0,0,0.541892875087706,1.50506932156456,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0,0,1.14853107599234,1.95018073810956,0,0.096670718292122,0.154048617114644,0,0,0,0,0.0852266274161009,0,1.15699440752685,0.768760269460425,0,2.12431339796655,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,1.31717957183961,0,0.349934720244983,0,0,0,0.0941438007767792,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0.988551862620595,0.716084698702437,0,0.197286811273867,0,0,0,0,0,1.30213880542617,0.437299999980979,0,0.1137934482855,0.508507300585533,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.230850775511391,0,0,0.179515288819544,0.325942115766024,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,1.21491816834592,1.7638631534588,1.56706571844725,0,0,0,0,0,1.64881328030313,0,0.90392296312213,0,0,0,0.391102765469606,0.400794101257669,0.213452994739353,0.19980960958213,0.288180834308212,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0,0.360299883542404,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0.321506296930038,0.687697182986169,1.24632101408756,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.318593534327405,0,0,0,0,0.521745061811734,0.300515217994437,0.380805212168795,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0.260994291965212,0.226705925512272,0,0.734210113519403,0,0.308801447160972,0.438568099157414,0.353378291891762,0.578742114812744,0.337884881306145,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.785181748008205,0.589848616738702,0.366857197043358,1.15525666150338,0,0,0,0,0,0,0,0.818859587550484,1.33070477595341,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0.280272163313789,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0.207216164163037,0.51215543128185,0.691259661814092,0,0,0,0,1.8328549483524,0,0,0.559277158988962,0.098150233615243,0.365753774946808,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0.301925687133347,0.308696632431779,0.874238242015829,0,0,0,0,0,0,0.169927114687817,0,0,0,0.892769693028288,1.41157948686277,0.240724100067505,1.46067277649303,0,0,0,0,0,0,0,0.462175628631418,0.865253124247578,0,0,0.126698501011437,0.305966489225945,0.534434810531121,1.56221329209236,0.250707539292375,0,0.267964130156178,0,0,0.852935927603924,0,0,0.0620747142958579,0.112131862580613,0.318235791390825,0.404234377916439,1.95945073107265,0.684466602170562,0.673520530145875,0.0717222053926763,0.665320713092027,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:42096519..42096522,- | |short_description=p@chr6:42096519..42096522,- | ||
}} | }} |
Latest revision as of 01:37, 31 July 2015
Short description: | p@chr6:42096519..42096522, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:42096519..42096522, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 2.53e-14 | 2 |
epithelial cell of sweat gland | 2.53e-14 | 2 |
epithelial cell of skin gland | 2.53e-14 | 2 |
acinar cell of sebaceous gland | 2.53e-14 | 2 |
corneal epithelial cell | 3.09e-14 | 2 |
epithelial cell | 3.67e-13 | 253 |
general ecto-epithelial cell | 1.23e-11 | 14 |
endo-epithelial cell | 3.84e-09 | 42 |
epithelial cell of esophagus | 6.19e-08 | 1 |
squamous epithelial cell | 3.99e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin gland | 2.53e-14 | 2 |
epidermis gland | 2.53e-14 | 2 |
gland of integumental system | 2.53e-14 | 2 |
sebaceous gland | 2.53e-14 | 2 |
skin sebaceous gland | 2.53e-14 | 2 |
sweat gland | 2.53e-14 | 2 |
sweat gland placode | 2.53e-14 | 2 |
sebaceous gland placode | 2.53e-14 | 2 |
esophagus | 6.00e-10 | 3 |
esophageal region | 6.00e-10 | 3 |
tongue | 6.87e-10 | 3 |
gustatory system | 6.87e-10 | 3 |
future tongue | 6.87e-10 | 3 |
mammalian vulva | 2.90e-08 | 1 |
external female genitalia | 2.90e-08 | 1 |
hepatopancreatic ampulla | 5.05e-08 | 1 |
extrahepatic bile duct | 5.05e-08 | 1 |
common bile duct | 5.05e-08 | 1 |
duodenal papilla | 5.05e-08 | 1 |
cornea | 1.49e-07 | 4 |
eye surface | 1.49e-07 | 4 |
optic eminence | 1.49e-07 | 4 |
corneal primordium | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.46e-08 | 14 |