FFCP PHASE1:Hg19::chr6:74083001..74083025,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:74083001..74083025,- to FFCP PHASE1:Hg19::chr6:74083001..74083025,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000424573_5end | |||
|cluster_id=chr6:74083001..74083025,- | |||
|coexpression_cluster_id=C4624 | |||
|description=CAGE_peak_1_at_ENST00000424573_5end | |||
|id=chr6:74083001..74083025,- | |||
|ontology_enrichment_celltype=CL:0000542!4.32e-16!53;CL:0000051!4.32e-16!53;CL:0000838!4.82e-16!52;CL:0000003!2.77e-09!722;CL:0000012!5.79e-09!682;CL:0002087!6.48e-09!119;CL:0000945!1.10e-08!24;CL:0000826!1.10e-08!24;CL:0000548!3.37e-08!679;CL:0000004!3.37e-08!679;CL:0000255!3.37e-08!679;CL:0000236!4.82e-08!14;CL:0000084!7.05e-08!25;CL:0000827!7.05e-08!25;CL:0000791!3.16e-07!18;CL:0000789!3.16e-07!18;CL:0002420!3.16e-07!18;CL:0002419!3.16e-07!18;CL:0000790!3.16e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.19e-10;53!CL:0000945;1.02e-08;24!CL:0000236;1.59e-08;13!CL:0000084;7.16e-08;25!CL:0000791;3.20e-07;18!CL:0000789;3.20e-07;18!CL:0002419;3.20e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.32e-16,53;CL:0000051,4.32e-16,53;CL:0000838,4.82e-16,52;CL:0000945,1.10e-08,24;CL:0000826,1.10e-08,24;CL:0000236,4.82e-08,14;CL:0002087,5.60e-08,115;CL:0000084,7.05e-08,25;CL:0000827,7.05e-08,25;CL:0000791,3.16e-07,18;CL:0000789,3.16e-07,18;CL:0002420,3.16e-07,18;CL:0002419,3.16e-07,18;CL:0000790,3.16e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;2.19e-10;53!CL:0000790;3.20e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000424573 | |||
}} | }} |
Latest revision as of 03:05, 31 July 2015
Short description: | p1@ENST00000424573 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000424573_5end |
Coexpression cluster: | C4624_CD34_CD4_CD8_CD133_CD19_testicular_diffuse |
Association with transcript: | -15bp_to_ENST00000424573_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.32e-16 | 53 |
common lymphoid progenitor | 4.32e-16 | 53 |
lymphoid lineage restricted progenitor cell | 4.82e-16 | 52 |
lymphocyte of B lineage | 1.10e-08 | 24 |
pro-B cell | 1.10e-08 | 24 |
B cell | 4.82e-08 | 14 |
nongranular leukocyte | 5.60e-08 | 115 |
T cell | 7.05e-08 | 25 |
pro-T cell | 7.05e-08 | 25 |
mature alpha-beta T cell | 3.16e-07 | 18 |
alpha-beta T cell | 3.16e-07 | 18 |
immature T cell | 3.16e-07 | 18 |
mature T cell | 3.16e-07 | 18 |
immature alpha-beta T cell | 3.16e-07 | 18 |