FFCP PHASE1:Hg19::chr6:7583024..7583048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:7583024..7583048,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7583024..7583048,+ | |description=CAGE_peak_at_chr6:7583024..7583048,+ | ||
|id=chr6:7583024..7583048,+ | |id=chr6:7583024..7583048,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.18e-29!254;CL:0000223!3.21e-16!59;CL:0002076!2.71e-13!43;CL:0002251!6.28e-08!21 | |ontology_enrichment_celltype=CL:0000066!1.18e-29!254;CL:0000223!3.21e-16!59;CL:0002076!2.71e-13!43;CL:0002251!6.28e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.50e-09;5!CL:0002076;1.43e-08;42!CL:0000039;2.64e-08;7!CL:0000586;2.64e-08;7!CL:0000154;7.55e-08;6!CL:0002251;4.93e-07;20!CL:0002623;8.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.38e-16,253;CL:0000223,2.63e-15,58;CL:0002076,4.18e-11,42;CL:0000622,1.30e-09,5;CL:0000039,2.32e-08,7;CL:0000586,2.32e-08,7;CL:0000154,6.74e-08,6;CL:0002251,4.34e-07,20;CL:0002623,9.95e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.71e-08;58 | |||
|ontology_enrichment_disease=DOID:305!4.77e-25!106;DOID:0050687!6.77e-19!143;DOID:162!1.80e-11!235;DOID:14566!1.55e-10!239;DOID:193!2.75e-08!29;DOID:299!9.97e-08!25;DOID:120!2.58e-07!27 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.37e-09,106;DOID:0050687,2.80e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.90e-11!169;UBERON:0000925!1.90e-11!169;UBERON:0006595!1.90e-11!169;UBERON:0001007!8.55e-10!155;UBERON:0001555!8.55e-10!155;UBERON:0007026!8.55e-10!155;UBERON:0001004!1.20e-09!72;UBERON:0004921!6.74e-09!129;UBERON:0004185!6.74e-09!129;UBERON:0000466!1.47e-08!126;UBERON:0000077!1.54e-08!130;UBERON:0001041!2.71e-08!98;UBERON:0000065!1.31e-07!53;UBERON:0000464!1.98e-07!104;UBERON:0001048!7.30e-07!168 | |ontology_enrichment_uberon=UBERON:0004119!1.90e-11!169;UBERON:0000925!1.90e-11!169;UBERON:0006595!1.90e-11!169;UBERON:0001007!8.55e-10!155;UBERON:0001555!8.55e-10!155;UBERON:0007026!8.55e-10!155;UBERON:0001004!1.20e-09!72;UBERON:0004921!6.74e-09!129;UBERON:0004185!6.74e-09!129;UBERON:0000466!1.47e-08!126;UBERON:0000077!1.54e-08!130;UBERON:0001041!2.71e-08!98;UBERON:0000065!1.31e-07!53;UBERON:0000464!1.98e-07!104;UBERON:0001048!7.30e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;6.08e-08;31!UBERON:0002330;6.08e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.48e-08,31;UBERON:0002330,6.48e-08,31;UBERON:0004119,8.06e-07,160;UBERON:0000925,8.06e-07,160;UBERON:0006595,8.06e-07,160 | |||
|phase1_expression=0.908391896352783,2.14100523890983,0,0,0.893922188854576,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.43917392846563,0.0654895377488563,0,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,1.98788780678127,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0.717558542755448,0,0.211931901159562,1.80054657650641,0.103052529238439,1.8034837803194,0.558350568994769,1.0126579934476,0.194874010322397,2.01947019395292,0.0920498986422993,0.484938170456436,0.355009592516614,0.201504196455281,0.67824236924195,0.966304265816484,0.545492241181669,0,0.243947412259191,0.132529768321485,0.813357600086629,1.34759371519982,1.00928340350251,1.09493207722749,0,0,0,0.464367928031979,0,2.24782920075703,1.18009283054671,0.482022059766964,0.441175890929576,0.653638332277218,0.71181185733329,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,0,1.77236972004421,0,0.491953754172454,0.171567810298526,4.49976170175365,0,4.92591964816991,2.22212268380471,0,0,0,0,0,0.144366447761074,0,1.14152491340759,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,3.35964256397719,1.27597587518148,5.1943943167652,3.19697332365358,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,1.91699884393266,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,2.07970861530807,3.56857977594324,2.05013139544115,0.937131319941706,0,0,0,1.99267679560631,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,1.73675465473144,1.84154367945675,0.841980283299221,0.128139149255701,2.55853624533352,2.2519548960105,0,0,0.177561725313127,0,0,0,1.32945394550784,2.40607764363942,8.01104603742298,0,0,0,0,0.847168708148562,0,1.46139224653261,0.527758144464379,0,0,1.29549549661284,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0,0,1.72279661398852,5.85054221432869,0,0,0,0,0.137836572484531,0,0,0,0,1.32227932288782,3.0750410778417,3.82838137483752,1.8208400553999,0,0.94443704049192,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.48111056362756,0,1.08890984861323,0.659006605437454,0,1.68471475667626,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0.961416640147258,0,4.90080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,4.7748896947538,0.296964680832639,16.5866779133585,0,0,0,0,0,0,0.276283915531148,8.31378067919111,0.409074730008619,0,0.933118762985422,0,0.895105873378046,0,0,0,0,0,0,0,4.16684417736373,0.0874599999961957,0,0.682760689712998,1.01701460117107,5.67330436243047,0.344743373241465,0,0,0,0,0,0,0,0.438770794307945,0.32681539055697,4.3221360726367,0.384751292518985,0,1.38338342632836,3.50054813198111,9.77826347298073,3.50901275705111,0.549585560411174,6.39641731222362,0,0,0,0,0,0,0,0,1.05499032264014,0.489698424477443,0.282706142867882,0.649165919226273,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0.242780379534093,0.789168805698781,1.20990716048664,0.30607276163049,0.189559738885464,0.150323419414493,1.03688191397247,0,0,0,0,0.284609546029793,0,6.76882979507011,0.979923974143776,0.34823682632161,0.52418000472609,0.171986032471617,0.870806981601766,0.877071805034227,0.574808199372465,1.84279131327997,0,1.35588444468319,0,0,0,1.95551382734803,0.240476460754601,0.213452994739353,3.59657297247834,2.01726584015748,0,1.20116498503375,0.432164393964449,0,6.83512700388707,0,0,0,0,0,0,0,1.28929632425987,0,0.279282401272254,1.83328339209347,0.717873024576814,7.18844401796368,2.57535628881943,0,0.201550417460179,0.360299883542404,5.82479747637269,3.86037593305396,3.87354534391482,3.1005630172925,1.08270229666224,0,0,0,0.482259445395058,0.412618309791701,0.83088067605837,1.1248694577575,1.5476039091159,0,4.02521625119119,0.315222829196793,0.0524545881349981,0.316801009558219,0,0.575745591958336,2.85878130549347,0.662091970365432,0,0,0,0,1.19730191562487,0,0.340776043570843,0,0.439656701034247,0,0,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,0.785270481251171,0,0.122026264901963,0,0,0.443716206147409,0,0.553394539744923,0.499921631848426,0,0,0.235265819698172,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,1.0633668582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| ||
|short_description=p@chr6:7583024..7583048,+ | |short_description=p@chr6:7583024..7583048,+ | ||
}} | }} |
Latest revision as of 03:13, 31 July 2015
Short description: | p@chr6:7583024..7583048, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7583024..7583048, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.38e-16 | 253 |
endodermal cell | 2.63e-15 | 58 |
endo-epithelial cell | 4.18e-11 | 42 |
acinar cell | 1.30e-09 | 5 |
germ line cell | 2.32e-08 | 7 |
germ cell | 2.32e-08 | 7 |
protein secreting cell | 6.74e-08 | 6 |
epithelial cell of alimentary canal | 4.34e-07 | 20 |
acinar cell of salivary gland | 9.95e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 6.48e-08 | 31 |
exocrine system | 6.48e-08 | 31 |
endoderm-derived structure | 8.06e-07 | 160 |
endoderm | 8.06e-07 | 160 |
presumptive endoderm | 8.06e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.37e-09 | 106 |
cell type cancer | 2.80e-08 | 143 |