FFCP PHASE1:Hg19::chr6:75912479..75912515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:75912479..75912515,+ | |||
|coexpression_cluster_id=C1280 | |||
|description=CAGE_peak_at_chr6:75912479..75912515,+ | |description=CAGE_peak_at_chr6:75912479..75912515,+ | ||
|id=chr6:75912479..75912515,+ | |id=chr6:75912479..75912515,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.10e-17!180;CL:0000057!3.12e-17!75;CL:0002620!3.03e-12!23;CL:0002334!7.80e-08!12 | |ontology_enrichment_celltype=CL:0000055!3.10e-17!180;CL:0000057!3.12e-17!75;CL:0002620!3.03e-12!23;CL:0002334!7.80e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.95e-20;12!CL:0002580;1.64e-16;3!CL:0002615;2.95e-16;3!CL:0002579;1.24e-15;3!CL:0000153;1.84e-13;9!CL:0000447;1.84e-13;9!CL:0000138;2.15e-13;6!CL:0002620;2.84e-12;23!CL:0000327;3.54e-11;15!CL:0000136;1.17e-09;13!CL:0000057;4.08e-08;73!CL:0000197;7.15e-08;6!CL:0000098;7.15e-08;6!CL:0002167;7.15e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,7.95e-20,12;CL:0000057,8.71e-17,76;CL:0002580,1.45e-16,3;CL:0002615,4.02e-16,3;CL:0002579,2.00e-15,3;CL:0000153,1.29e-13,9;CL:0000447,1.29e-13,9;CL:0000058,1.96e-13,6;CL:0000138,1.96e-13,6;CL:0002620,2.55e-12,23;CL:0000327,3.17e-11,15;CL:0000136,2.35e-08,15;CL:0000197,9.42e-08,6;CL:0000098,9.42e-08,6;CL:0002167,9.42e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1192;1.18e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,9.66e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.36e-10!40;UBERON:0003102!3.38e-10!95;UBERON:0002199!3.18e-09!45;UBERON:0002416!3.18e-09!45;UBERON:0003688!3.37e-09!6;UBERON:0002358!3.37e-09!6;UBERON:0003684!3.37e-09!6;UBERON:0001178!3.37e-09!6;UBERON:0004923!7.47e-08!57;UBERON:0004457!7.07e-07!12;UBERON:0000042!7.07e-07!12 | |ontology_enrichment_uberon=UBERON:0002097!3.36e-10!40;UBERON:0003102!3.38e-10!95;UBERON:0002199!3.18e-09!45;UBERON:0002416!3.18e-09!45;UBERON:0003688!3.37e-09!6;UBERON:0002358!3.37e-09!6;UBERON:0003684!3.37e-09!6;UBERON:0001178!3.37e-09!6;UBERON:0004923!7.47e-08!57;UBERON:0004457!7.07e-07!12;UBERON:0000042!7.07e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.20e-30;6!UBERON:0002358;4.20e-30;6!UBERON:0003684;4.20e-30;6!UBERON:0001178;4.20e-30;6!UBERON:0004457;1.27e-26;9!UBERON:0000042;1.27e-26;9!UBERON:0001443;1.41e-11;11!UBERON:0005406;1.64e-10;2!UBERON:0000310;1.32e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.19e-30,6;UBERON:0002358,9.19e-30,6;UBERON:0003684,9.19e-30,6;UBERON:0001178,9.19e-30,6;UBERON:0004457,1.12e-19,12;UBERON:0000042,1.12e-19,12;UBERON:0001443,1.15e-11,11;UBERON:0005406,9.09e-11,2;UBERON:0000310,1.25e-08,10 | |||
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| ||
|short_description=p@chr6:75912479..75912515,+ | |short_description=p@chr6:75912479..75912515,+ | ||
}} | }} |
Latest revision as of 03:15, 31 July 2015
Short description: | p@chr6:75912479..75912515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75912479..75912515, + |
Coexpression cluster: | C1280_Preadipocyte_Fibroblast_Adipocyte_leiomyoblastoma_Ewing_Chondrocyte_spindle |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 7.95e-20 | 12 |
fibroblast | 8.71e-17 | 76 |
preadipocyte of the breast | 1.45e-16 | 3 |
adipocyte of omentum tissue | 4.02e-16 | 3 |
omentum preadipocyte | 2.00e-15 | 3 |
GAG secreting cell | 1.29e-13 | 9 |
carbohydrate secreting cell | 1.29e-13 | 9 |
chondroblast | 1.96e-13 | 6 |
chondrocyte | 1.96e-13 | 6 |
skin fibroblast | 2.55e-12 | 23 |
extracellular matrix secreting cell | 3.17e-11 | 15 |
fat cell | 2.35e-08 | 15 |
receptor cell | 9.42e-08 | 6 |
sensory epithelial cell | 9.42e-08 | 6 |
olfactory epithelial cell | 9.42e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.19e-30 | 6 |
peritoneum | 9.19e-30 | 6 |
abdominal cavity | 9.19e-30 | 6 |
visceral peritoneum | 9.19e-30 | 6 |
cavity lining | 1.12e-19 | 12 |
serous membrane | 1.12e-19 | 12 |
chest | 1.15e-11 | 11 |
perirenal fat | 9.09e-11 | 2 |
breast | 1.25e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 9.66e-08 | 3 |