FFCP PHASE1:Hg19::chr7:128410595..128410611,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:128410595..128410611,+
|short_description=p@chr7:128410595..128410611,+
|description=CAGE_peak_at_chr7:128410595..128410611,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:128410595..128410611,+ | |||
|coexpression_cluster_id=C2057 | |||
|description=CAGE_peak_at_chr7:128410595..128410611,+ | |||
|id=chr7:128410595..128410611,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.30e-14!75;CL:0000055!3.07e-12!180;CL:0002334!5.82e-09!12;CL:0002620!1.62e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.36e-14;12!CL:0002615;3.12e-12;3!CL:0002579;1.77e-11;3!CL:0002620;2.25e-11;23!CL:0000136;3.41e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.75e-14,76;CL:0002334,3.17e-14,12;CL:0002615,3.86e-12,3;CL:0002579,8.42e-12,3;CL:0000136,1.37e-11,15;CL:0002620,2.18e-11,23;CL:0000048,1.35e-08,427;CL:0000134,1.42e-08,354;CL:0000723,2.47e-08,433;CL:0002320,3.15e-08,361;CL:0000034,5.39e-08,441;CL:0000219,5.16e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.03e-08!14;DOID:193!4.46e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:17;2.33e-07;5!DOID:450;2.33e-07;5!DOID:66;2.33e-07;5!DOID:423;2.33e-07;5!DOID:0080000;2.33e-07;5!DOID:11722;2.33e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.93e-07,5;DOID:450,2.93e-07,5;DOID:66,2.93e-07,5;DOID:423,2.93e-07,5;DOID:0080000,2.93e-07,5;DOID:11722,2.93e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.42e-07!95;UBERON:0005156!4.54e-07!59;UBERON:0000990!4.54e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.32e-25;9!UBERON:0000042;6.32e-25;9!UBERON:0003688;5.80e-22;6!UBERON:0002358;5.80e-22;6!UBERON:0003684;5.80e-22;6!UBERON:0001178;5.80e-22;6!UBERON:0005406;1.52e-08;2!UBERON:0002199;1.61e-07;46!UBERON:0002416;1.61e-07;46!UBERON:0002097;2.70e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.39e-22,6;UBERON:0002358,3.39e-22,6;UBERON:0003684,3.39e-22,6;UBERON:0001178,3.39e-22,6;UBERON:0004457,1.41e-18,12;UBERON:0000042,1.41e-18,12;UBERON:0002384,9.16e-10,371;UBERON:0002199,5.43e-09,46;UBERON:0002416,5.43e-09,46;UBERON:0002097,1.31e-08,41;UBERON:0005406,1.44e-08,2;UBERON:0004458,3.22e-08,49;UBERON:0004923,1.26e-07,66 | |||
|phase1_expression=2.72517568905835,0.856402095563933,2.67813367782345,2.00146596706261,2.23480547213644,4.36169262050184,2.53299878168311,0,0.783556884599516,0,0,0,0,0.247532705920093,0.331397375727916,2.6893005858071,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,4.3372698286148,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,1.49091585508596,1.2663051166458,0.794455084879313,3.15520282823695,0.709336764396714,0,0,0.74000264525148,0.622422070799533,0.134710672069688,0.326923806226917,0,0,0,0.624320153660641,0,1.04614076386261,0,0,0,0,0.122834317311768,0.103325781175765,0,0.989067717114227,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,2.15267562826634,1.2813443329114,0.423863802319124,3.00091096084402,0.206105058476878,1.8034837803194,1.67505170698431,1.5189869901714,0.389748020644795,2.27190396819703,0.0920498986422993,0.484938170456436,6.39017266529906,0.302256294682921,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.473227200159376,0,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.439001141634502,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0.352193736052904,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.517086863031111,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.699810938274399,0,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,0.205476322550383,0,0.224170287987055,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.623912584592421,1.96271887676878,0.946214490203608,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,3.47350930946288,0.153461973288062,2.80660094433074,2.30650468660262,1.53512174720011,1.93024705372329,1.48418066444991,0.308419387605311,0.532685175939381,0.657017248110473,1.03850885836724,0.697262270759755,0.483437798366489,0.601519410909855,0.552485933615378,0.229628896329213,0.546273504020151,1.04899531967539,0,0.15403067420883,0,0,0.211103257785751,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.290012154876366,0,0.307007349452259,0,0.107420244868274,0.290033387828457,0,0.267096106940212,0,0.768760269460425,0,0.30347334256665,0,8.81474571125792,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0,0,0.78494864019923,0,0.823611089208164,0.117812402345686,0.202182481573316,0,0,0,1.46228093778771,0,0.818999468447914,1.55545975149084,0,0,1.32687795048244,0,0,0,0.202910376962704,0,0,0,0.196498082026242,0,0.354761064070598,1.68886108238131,1.31717957183961,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.371606350251437,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0,0,0.23874448473769,0.890894042497916,0.307160702099232,0,0.140669416410513,0.333926115068718,0.16480387422676,0,0,0,0,0,0,1.24415835064723,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0,0,0.307801034015188,0.227884111694002,0.23056390438806,0.538545866458633,0.108647371922008,0,0.824378340616761,2.13213910407454,0,0,0.166211681900156,0,0.392125068635479,0,0,0,0.210998064528027,0.326465616318295,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,1.60515529459758,0,0.182454789215666,0,0.242780379534093,0.394584402849391,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0.277349346026277,0.173559738335131,0.0979923974143777,0,0.17472666824203,0.343972064943233,0.0967563312890851,0.146178634172371,0,0.0969890164884194,0.0882561266915003,0,0.548167698587004,0.397429223405979,0,0.195551382734803,0.240476460754601,0,0,0,0,0,0.14405479798815,0,0,0,0,0.203996435272644,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0.321506296930038,0.412618309791701,0,0,0,0,0,0,0,0.211200673038813,0.35857467866569,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0,0,0,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| ||
|short_description=p@chr7:128410595..128410611,+ | |||
}} | }} |
Latest revision as of 05:48, 31 July 2015
Short description: | p@chr7:128410595..128410611, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:128410595..128410611, + |
Coexpression cluster: | C2057_Smooth_Fibroblast_Chondrocyte_Adipocyte_Aortic_Synoviocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.75e-14 | 76 |
preadipocyte | 3.17e-14 | 12 |
adipocyte of omentum tissue | 3.86e-12 | 3 |
omentum preadipocyte | 8.42e-12 | 3 |
fat cell | 1.37e-11 | 15 |
skin fibroblast | 2.18e-11 | 23 |
multi fate stem cell | 1.35e-08 | 427 |
mesenchymal cell | 1.42e-08 | 354 |
somatic stem cell | 2.47e-08 | 433 |
connective tissue cell | 3.15e-08 | 361 |
stem cell | 5.39e-08 | 441 |
motile cell | 5.16e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.39e-22 | 6 |
peritoneum | 3.39e-22 | 6 |
abdominal cavity | 3.39e-22 | 6 |
visceral peritoneum | 3.39e-22 | 6 |
cavity lining | 1.41e-18 | 12 |
serous membrane | 1.41e-18 | 12 |
connective tissue | 9.16e-10 | 371 |
integument | 5.43e-09 | 46 |
integumental system | 5.43e-09 | 46 |
skin of body | 1.31e-08 | 41 |
perirenal fat | 1.44e-08 | 2 |
body cavity or lining | 3.22e-08 | 49 |
organ component layer | 1.26e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.93e-07 | 5 |
myotonic disease | 2.93e-07 | 5 |
muscle tissue disease | 2.93e-07 | 5 |
myopathy | 2.93e-07 | 5 |
muscular disease | 2.93e-07 | 5 |
myotonic dystrophy | 2.93e-07 | 5 |