FFCP PHASE1:Hg19::chr7:26234405..26234412,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:26234405..26234412,- | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr7:26234405..26234412,- | |||
|id=chr7:26234405..26234412,- | |||
|ontology_enrichment_celltype=CL:0000037!2.13e-26!172;CL:0000566!2.13e-26!172;CL:0000738!1.91e-25!140;CL:0002032!2.18e-24!165;CL:0000837!2.18e-24!165;CL:0002087!1.87e-23!119;CL:0000988!4.72e-23!182;CL:0002031!1.12e-22!124;CL:0000542!1.37e-14!53;CL:0000051!1.37e-14!53;CL:0000838!5.10e-14!52;CL:0000763!6.24e-11!112;CL:0000049!6.24e-11!112;CL:0000860!1.48e-10!45;CL:0000766!1.89e-10!76;CL:0002057!2.40e-10!42;CL:0000557!2.13e-09!71;CL:0000839!2.33e-09!70;CL:0002009!6.89e-09!65;CL:0002194!1.27e-08!63;CL:0000576!1.27e-08!63;CL:0000040!1.27e-08!63;CL:0000559!1.27e-08!63;CL:0000084!5.86e-07!25;CL:0000827!5.86e-07!25;CL:0000945!9.42e-07!24;CL:0000826!9.42e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.89e-10;53!CL:0002087;2.18e-09;104!CL:0000860;1.91e-08;33!CL:0002057;1.91e-08;33!CL:0000084;3.91e-08;25!CL:0000945;1.81e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.27e-28,136;CL:0000037,6.04e-27,168;CL:0002087,2.32e-26,115;CL:0000988,3.44e-25,177;CL:0002032,3.12e-24,161;CL:0000837,3.12e-24,161;CL:0002031,4.69e-24,120;CL:0000542,2.56e-17,53;CL:0000051,2.56e-17,53;CL:0000838,1.36e-16,52;CL:0000860,4.37e-12,42;CL:0002057,4.37e-12,42;CL:0000766,5.18e-11,72;CL:0000473,7.00e-10,48;CL:0000234,7.00e-10,48;CL:0000557,2.76e-09,67;CL:0000763,2.93e-09,108;CL:0000049,2.93e-09,108;CL:0002009,7.16e-09,61;CL:0000839,8.99e-09,66;CL:0002194,1.05e-08,59;CL:0000576,1.05e-08,59;CL:0000040,1.05e-08,59;CL:0000559,1.05e-08,59;CL:0000084,1.88e-08,25;CL:0000827,1.88e-08,25;CL:0000945,2.28e-07,24;CL:0000826,2.28e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.89e-10;53!CL:0002057;5.92e-09;42 | |||
|ontology_enrichment_disease=DOID:162!1.64e-24!235;DOID:14566!3.04e-23!239;DOID:0050686!9.15e-16!137;DOID:0050687!1.27e-13!143;DOID:305!4.81e-11!106;DOID:2531!1.07e-08!51;DOID:0060083!1.07e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.89e-22,235;DOID:14566,1.77e-21,239;DOID:0050687,1.59e-14,143;DOID:0050686,4.31e-14,137;DOID:305,1.31e-11,106;DOID:2531,7.56e-08,51;DOID:0060083,7.56e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-10!102;UBERON:0003061!2.51e-10!102;UBERON:0001474!3.18e-08!86;UBERON:0002371!3.39e-08!80;UBERON:0002193!1.35e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.57e-10,98;UBERON:0003061,3.57e-10,98;UBERON:0002371,2.71e-08,76;UBERON:0002193,4.91e-08,108;UBERON:0001474,1.04e-07,82 | |||
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| |||
|short_description=p@chr7:26234405..26234412,- | |||
}} |
Latest revision as of 08:50, 31 July 2015
Short description: | p@chr7:26234405..26234412, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:26234405..26234412, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.27e-28 | 136 |
hematopoietic stem cell | 6.04e-27 | 168 |
nongranular leukocyte | 2.32e-26 | 115 |
hematopoietic cell | 3.44e-25 | 177 |
hematopoietic oligopotent progenitor cell | 3.12e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.12e-24 | 161 |
hematopoietic lineage restricted progenitor cell | 4.69e-24 | 120 |
lymphocyte | 2.56e-17 | 53 |
common lymphoid progenitor | 2.56e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.36e-16 | 52 |
classical monocyte | 4.37e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.37e-12 | 42 |
myeloid leukocyte | 5.18e-11 | 72 |
defensive cell | 7.00e-10 | 48 |
phagocyte | 7.00e-10 | 48 |
granulocyte monocyte progenitor cell | 2.76e-09 | 67 |
myeloid cell | 2.93e-09 | 108 |
common myeloid progenitor | 2.93e-09 | 108 |
macrophage dendritic cell progenitor | 7.16e-09 | 61 |
myeloid lineage restricted progenitor cell | 8.99e-09 | 66 |
monopoietic cell | 1.05e-08 | 59 |
monocyte | 1.05e-08 | 59 |
monoblast | 1.05e-08 | 59 |
promonocyte | 1.05e-08 | 59 |
T cell | 1.88e-08 | 25 |
pro-T cell | 1.88e-08 | 25 |
lymphocyte of B lineage | 2.28e-07 | 24 |
pro-B cell | 2.28e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.57e-10 | 98 |
blood island | 3.57e-10 | 98 |
bone marrow | 2.71e-08 | 76 |
hemolymphoid system | 4.91e-08 | 108 |
bone element | 1.04e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.89e-22 | 235 |
disease of cellular proliferation | 1.77e-21 | 239 |
cell type cancer | 1.59e-14 | 143 |
organ system cancer | 4.31e-14 | 137 |
carcinoma | 1.31e-11 | 106 |
hematologic cancer | 7.56e-08 | 51 |
immune system cancer | 7.56e-08 | 51 |