FFCP PHASE1:Hg19::chr7:27242115..27242139,+: Difference between revisions
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|id=chr7:27242115..27242139,+
|short_description=p@chr7:27242115..27242139,+
|description=CAGE_peak_at_chr7:27242115..27242139,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:27242115..27242139,+ | |||
|coexpression_cluster_id=C2300 | |||
|description=CAGE_peak_at_chr7:27242115..27242139,+ | |||
|id=chr7:27242115..27242139,+ | |||
|ontology_enrichment_celltype=CL:0002622!1.72e-15!3;CL:1000487!6.11e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:1000487;3.34e-11;2!CL:0002622;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,3.70e-11,2;CL:0002622,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004874;5.16e-21;1!UBERON:0009847;6.78e-08;3!UBERON:0003353;6.78e-08;3 | |||
|ontology_enrichment_disease=DOID:3307!1.81e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:3307;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.04e-43!9;UBERON:0003937!6.27e-32!12;UBERON:0005399!6.27e-32!12;UBERON:0002367!1.54e-27!11;UBERON:0010147!1.54e-27!11;UBERON:0009846!1.54e-27!11;UBERON:0003353!1.54e-27!11;UBERON:0004902!1.54e-27!11;UBERON:0003820!1.54e-27!11;UBERON:0009847!1.54e-27!11;UBERON:0000162!8.77e-27!14;UBERON:0001353!8.77e-27!14;UBERON:0000163!8.77e-27!14;UBERON:0006866!8.77e-27!14;UBERON:0000164!8.77e-27!14;UBERON:0000931!8.77e-27!14;UBERON:0004122!6.77e-25!15;UBERON:0003101!8.08e-21!22;UBERON:0000079!8.08e-21!22;UBERON:0001557!1.29e-19!19;UBERON:0001046!2.49e-19!19;UBERON:0005156!1.55e-15!59;UBERON:0000990!1.55e-15!59;UBERON:0003064!5.23e-14!37;UBERON:0006554!2.43e-11!44;UBERON:0001008!4.84e-11!45;UBERON:0004921!1.39e-10!129;UBERON:0004185!1.39e-10!129;UBERON:0000077!1.67e-10!130;UBERON:0000161!8.61e-10!35;UBERON:0008947!4.97e-09!38;UBERON:0003258!4.97e-09!38;UBERON:0004119!5.51e-09!169;UBERON:0000925!5.51e-09!169;UBERON:0006595!5.51e-09!169;UBERON:0001007!4.19e-08!155;UBERON:0001555!4.19e-08!155;UBERON:0007026!4.19e-08!155;UBERON:0005795!1.48e-07!22;UBERON:0005153!2.53e-07!37;UBERON:0000072!3.38e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;5.16e-21;1!UBERON:0000989;5.16e-21;1!UBERON:0008811;5.16e-21;1!UBERON:0002367;8.80e-17;11!UBERON:0010147;8.80e-17;11!UBERON:0003937;1.92e-15;12!UBERON:0005399;1.92e-15;12!UBERON:0003101;1.03e-14;22!UBERON:0000079;1.03e-14;22!UBERON:0000077;3.30e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.82e-21,1;UBERON:0008811,2.82e-21,1;UBERON:0006258,2.82e-21,1;UBERON:0005876,2.82e-21,1;UBERON:0004874,2.82e-21,1;UBERON:0002367,1.09e-16,11;UBERON:0010147,1.09e-16,11;UBERON:0009846,1.09e-16,11;UBERON:0003353,1.09e-16,11;UBERON:0004902,1.09e-16,11;UBERON:0003820,1.09e-16,11;UBERON:0009847,1.09e-16,11;UBERON:0003937,2.34e-15,12;UBERON:0005399,2.34e-15,12;UBERON:0003101,1.06e-14,22;UBERON:0000079,1.06e-14,22;UBERON:0000162,2.90e-13,14;UBERON:0001353,2.90e-13,14;UBERON:0000163,2.90e-13,14;UBERON:0006866,2.90e-13,14;UBERON:0000164,2.90e-13,14;UBERON:0000931,2.90e-13,14;UBERON:0004122,2.00e-12,15;UBERON:0003064,1.23e-11,28;UBERON:0001046,6.05e-10,19;UBERON:0005156,1.67e-08,59;UBERON:0000990,1.67e-08,59 | |||
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|short_description=p@chr7:27242115..27242139,+ | |||
}} | }} |
Latest revision as of 09:06, 31 July 2015
Short description: | p@chr7:27242115..27242139, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:27242115..27242139, + |
Coexpression cluster: | C2300_tridermal_sacrococcigeal_hepatic_granulosa_penis_normal_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 3.70e-11 | 2 |
prostate stromal cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
penis | 2.82e-21 | 1 |
intromittent organ | 2.82e-21 | 1 |
lateral plate mesenchyme | 2.82e-21 | 1 |
undifferentiated genital tubercle | 2.82e-21 | 1 |
somatopleure | 2.82e-21 | 1 |
prostate gland | 1.09e-16 | 11 |
male accessory sex gland | 1.09e-16 | 11 |
embryonic cloacal epithelium | 1.09e-16 | 11 |
epithelium of hindgut | 1.09e-16 | 11 |
urogenital sinus epithelium | 1.09e-16 | 11 |
prostate bud | 1.09e-16 | 11 |
prostate field | 1.09e-16 | 11 |
sex gland | 2.34e-15 | 12 |
male reproductive gland | 2.34e-15 | 12 |
male organism | 1.06e-14 | 22 |
male reproductive system | 1.06e-14 | 22 |
cloaca | 2.90e-13 | 14 |
anal region | 2.90e-13 | 14 |
embryonic cloaca | 2.90e-13 | 14 |
terminal part of digestive tract | 2.90e-13 | 14 |
primitive urogenital sinus | 2.90e-13 | 14 |
proctodeum | 2.90e-13 | 14 |
genitourinary system | 2.00e-12 | 15 |
intermediate mesoderm | 1.23e-11 | 28 |
hindgut | 6.05e-10 | 19 |
reproductive structure | 1.67e-08 | 59 |
reproductive system | 1.67e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.82e-11 | 2 |