FFCP PHASE1:Hg19::chr8:104554038..104554045,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:104554038..104554045,+ | |||
|coexpression_cluster_id=C4715 | |coexpression_cluster_id=C4715 | ||
|description=CAGE_peak_at_chr8:104554038..104554045,+ | |description=CAGE_peak_at_chr8:104554038..104554045,+ | ||
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|ontology_enrichment_celltype=CL:0002319!2.05e-07!25;CL:0000540!2.84e-07!6;CL:0000031!2.84e-07!6;CL:0000404!2.84e-07!6 | |ontology_enrichment_celltype=CL:0002319!2.05e-07!25;CL:0000540!2.84e-07!6;CL:0000031!2.84e-07!6;CL:0000404!2.84e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.90e-12;2 | |ontology_enrichment_celltype_v019=CL:0002535;2.90e-12;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.90e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.47e-30;3 | |ontology_enrichment_development_v019=UBERON:0006215;1.47e-30;3 | ||
|ontology_enrichment_disease=DOID:5409!2.37e-10!4;DOID:0050687!3.04e-09!143;DOID:1325!5.07e-09!7;DOID:3904!5.07e-09!7;DOID:305!4.55e-08!106;DOID:169!9.91e-07!6 | |ontology_enrichment_disease=DOID:5409!2.37e-10!4;DOID:0050687!3.04e-09!143;DOID:1325!5.07e-09!7;DOID:3904!5.07e-09!7;DOID:305!4.55e-08!106;DOID:169!9.91e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:178;4.10e-23;1!DOID:326;4.10e-23;1!DOID:3978;4.10e-23;1!DOID:3394;4.10e-23;1!DOID:5844;4.10e-23;1!DOID:114;2.90e-12;2!DOID:1287;9.10e-07;4!DOID:5409;9.10e-07;4 | |ontology_enrichment_disease_v019=DOID:178;4.10e-23;1!DOID:326;4.10e-23;1!DOID:3978;4.10e-23;1!DOID:3394;4.10e-23;1!DOID:5844;4.10e-23;1!DOID:114;2.90e-12;2!DOID:1287;9.10e-07;4!DOID:5409;9.10e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:178,5.13e-23,1;DOID:326,5.13e-23,1;DOID:3978,5.13e-23,1;DOID:3394,5.13e-23,1;DOID:5844,5.13e-23,1;DOID:114,3.24e-12,2;DOID:5409,8.14e-07,4;DOID:1287,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.55e-21!94;UBERON:0001016!4.55e-21!94;UBERON:0001017!5.45e-18!82;UBERON:0001049!3.16e-17!57;UBERON:0005068!3.16e-17!57;UBERON:0006241!3.16e-17!57;UBERON:0007135!3.16e-17!57;UBERON:0005743!8.32e-17!86;UBERON:0002616!6.65e-15!59;UBERON:0000955!1.48e-14!69;UBERON:0006238!1.48e-14!69;UBERON:0002780!1.85e-13!41;UBERON:0001890!1.85e-13!41;UBERON:0006240!1.85e-13!41;UBERON:0003080!4.83e-13!42;UBERON:0004121!1.26e-12!169;UBERON:0002020!1.32e-12!34;UBERON:0003528!1.32e-12!34;UBERON:0000924!4.14e-12!173;UBERON:0006601!4.14e-12!173;UBERON:0003075!1.30e-11!86;UBERON:0007284!1.30e-11!86;UBERON:0002346!8.09e-11!90;UBERON:0003056!5.14e-10!61;UBERON:0002791!1.04e-09!33;UBERON:0002308!2.10e-09!9;UBERON:0000125!2.10e-09!9;UBERON:0001893!2.41e-09!34;UBERON:0001869!1.37e-08!32;UBERON:0000033!1.51e-08!123;UBERON:0000153!7.55e-08!129;UBERON:0007811!7.55e-08!129;UBERON:0000988!1.02e-07!3;UBERON:0006331!1.26e-07!3;UBERON:0002619!2.02e-07!22;UBERON:0002680!5.61e-07!9;UBERON:0001895!5.61e-07!9;UBERON:0010092!5.61e-07!9;UBERON:0002420!6.23e-07!9;UBERON:0007245!6.23e-07!9;UBERON:0010009!6.23e-07!9;UBERON:0010011!6.23e-07!9;UBERON:0000454!6.23e-07!9;UBERON:0003296!8.47e-07!4;UBERON:0010133!8.47e-07!4 | |ontology_enrichment_uberon=UBERON:0000073!4.55e-21!94;UBERON:0001016!4.55e-21!94;UBERON:0001017!5.45e-18!82;UBERON:0001049!3.16e-17!57;UBERON:0005068!3.16e-17!57;UBERON:0006241!3.16e-17!57;UBERON:0007135!3.16e-17!57;UBERON:0005743!8.32e-17!86;UBERON:0002616!6.65e-15!59;UBERON:0000955!1.48e-14!69;UBERON:0006238!1.48e-14!69;UBERON:0002780!1.85e-13!41;UBERON:0001890!1.85e-13!41;UBERON:0006240!1.85e-13!41;UBERON:0003080!4.83e-13!42;UBERON:0004121!1.26e-12!169;UBERON:0002020!1.32e-12!34;UBERON:0003528!1.32e-12!34;UBERON:0000924!4.14e-12!173;UBERON:0006601!4.14e-12!173;UBERON:0003075!1.30e-11!86;UBERON:0007284!1.30e-11!86;UBERON:0002346!8.09e-11!90;UBERON:0003056!5.14e-10!61;UBERON:0002791!1.04e-09!33;UBERON:0002308!2.10e-09!9;UBERON:0000125!2.10e-09!9;UBERON:0001893!2.41e-09!34;UBERON:0001869!1.37e-08!32;UBERON:0000033!1.51e-08!123;UBERON:0000153!7.55e-08!129;UBERON:0007811!7.55e-08!129;UBERON:0000988!1.02e-07!3;UBERON:0006331!1.26e-07!3;UBERON:0002619!2.02e-07!22;UBERON:0002680!5.61e-07!9;UBERON:0001895!5.61e-07!9;UBERON:0010092!5.61e-07!9;UBERON:0002420!6.23e-07!9;UBERON:0007245!6.23e-07!9;UBERON:0010009!6.23e-07!9;UBERON:0010011!6.23e-07!9;UBERON:0000454!6.23e-07!9;UBERON:0003296!8.47e-07!4;UBERON:0010133!8.47e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.79e-16;6!UBERON:0000007;2.07e-12;2!UBERON:0001954;2.90e-12;2!UBERON:0003022;2.90e-12;2!UBERON:0006955;2.90e-12;2!UBERON:0004801;2.90e-12;2!UBERON:0002421;2.90e-12;2!UBERON:0002600;2.90e-12;2!UBERON:0002680;6.87e-11;9!UBERON:0001895;6.87e-11;9!UBERON:0004733;2.12e-08;12!UBERON:0002028;2.12e-08;12!UBERON:0004732;8.03e-08;13!UBERON:0003296;7.69e-07;4!UBERON:0010133;7.69e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002037;7.79e-16;6!UBERON:0000007;2.07e-12;2!UBERON:0001954;2.90e-12;2!UBERON:0003022;2.90e-12;2!UBERON:0006955;2.90e-12;2!UBERON:0004801;2.90e-12;2!UBERON:0002421;2.90e-12;2!UBERON:0002600;2.90e-12;2!UBERON:0002680;6.87e-11;9!UBERON:0001895;6.87e-11;9!UBERON:0004733;2.12e-08;12!UBERON:0002028;2.12e-08;12!UBERON:0004732;8.03e-08;13!UBERON:0003296;7.69e-07;4!UBERON:0010133;7.69e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.79e-16,6;UBERON:0006215,7.79e-16,6;UBERON:0000007,2.07e-12,2;UBERON:0001954,2.59e-12,2;UBERON:0003022,2.59e-12,2;UBERON:0002421,2.59e-12,2;UBERON:0002600,2.59e-12,2;UBERON:0006955,2.90e-12,2;UBERON:0004801,2.90e-12,2;UBERON:0002680,6.87e-11,9;UBERON:0001895,6.87e-11,9;UBERON:0010092,6.87e-11,9;UBERON:0004733,2.12e-08,12;UBERON:0002028,2.12e-08,12;UBERON:0007277,2.12e-08,12;UBERON:0004732,8.03e-08,13;UBERON:0000073,6.01e-07,53;UBERON:0002616,6.01e-07,53;UBERON:0003076,6.79e-07,15;UBERON:0003057,6.79e-07,15;UBERON:0003296,7.70e-07,4;UBERON:0010133,7.70e-07,4 | |||
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| ||
|short_description=p@chr8:104554038..104554045,+ | |short_description=p@chr8:104554038..104554045,+ | ||
}} | }} |
Latest revision as of 13:49, 31 July 2015
Short description: | p@chr8:104554038..104554045, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:104554038..104554045, + |
Coexpression cluster: | C4715_gastrointestinal_cerebellum_pituitary_small_retinoblastoma_carcinosarcoma_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.90e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.79e-16 | 6 |
rhombic lip | 7.79e-16 | 6 |
pituitary gland | 2.07e-12 | 2 |
Ammon's horn | 2.59e-12 | 2 |
lobe parts of cerebral cortex | 2.59e-12 | 2 |
hippocampal formation | 2.59e-12 | 2 |
limbic lobe | 2.59e-12 | 2 |
uterine epithelium | 2.90e-12 | 2 |
cervix epithelium | 2.90e-12 | 2 |
regional part of metencephalon | 6.87e-11 | 9 |
metencephalon | 6.87e-11 | 9 |
future metencephalon | 6.87e-11 | 9 |
segmental subdivision of hindbrain | 2.12e-08 | 12 |
hindbrain | 2.12e-08 | 12 |
presumptive hindbrain | 2.12e-08 | 12 |
segmental subdivision of nervous system | 8.03e-08 | 13 |
regional part of nervous system | 6.01e-07 | 53 |
regional part of brain | 6.01e-07 | 53 |
posterior neural tube | 6.79e-07 | 15 |
chordal neural plate | 6.79e-07 | 15 |
gland of diencephalon | 7.70e-07 | 4 |
neuroendocrine gland | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 5.13e-23 | 1 |
ischemia | 5.13e-23 | 1 |
extrinsic cardiomyopathy | 5.13e-23 | 1 |
myocardial ischemia | 5.13e-23 | 1 |
myocardial infarction | 5.13e-23 | 1 |
heart disease | 3.24e-12 | 2 |
lung small cell carcinoma | 8.14e-07 | 4 |
cardiovascular system disease | 9.63e-07 | 4 |