FFCP PHASE1:Hg19::chr9:128846811..128846812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:128846811..128846812,+ | |||
|description=CAGE_peak_at_chr9:128846811..128846812,+ | |description=CAGE_peak_at_chr9:128846811..128846812,+ | ||
|id=chr9:128846811..128846812,+ | |id=chr9:128846811..128846812,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.53e-08!42;CL:0000860!7.24e-08!45 | |ontology_enrichment_celltype=CL:0002057!4.53e-08!42;CL:0000860!7.24e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.44e-12;6!CL:0000098;1.44e-12;6!CL:0002167;1.44e-12;6!CL:0002599;2.44e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.11e-12,6;CL:0000098,2.11e-12,6;CL:0002167,2.11e-12,6;CL:0002599,1.69e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.44e-09;1!DOID:3149;2.44e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.72e-09,1;DOID:3149,5.72e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.44e-09;1!UBERON:0000026;2.44e-09;1!UBERON:0008784;2.44e-09;1!UBERON:0006058;2.44e-09;1!UBERON:0003663;2.44e-09;1!UBERON:0004256;2.44e-09;1!UBERON:0004708;2.44e-09;1!UBERON:0002101;2.44e-09;1!UBERON:0004709;2.44e-09;1!UBERON:0002529;2.44e-09;1!UBERON:0010538;2.44e-09;1!UBERON:0003661;2.44e-09;1!UBERON:0010890;2.44e-09;1!UBERON:0002471;2.44e-09;1!UBERON:0001383;2.44e-09;1!UBERON:0010758;2.44e-09;1!UBERON:0010707;2.44e-09;1!UBERON:0000978;2.44e-09;1!UBERON:0002103;2.44e-09;1!UBERON:0001665;2.44e-09;1!UBERON:0003823;2.44e-09;1!UBERON:0000154;2.44e-09;1!UBERON:0010709;2.44e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.16e-09,1;UBERON:0001389,2.16e-09,1;UBERON:0000026,2.16e-09,1;UBERON:0008784,2.16e-09,1;UBERON:0006058,2.16e-09,1;UBERON:0003663,2.16e-09,1;UBERON:0004256,2.16e-09,1;UBERON:0004708,2.16e-09,1;UBERON:0002101,2.16e-09,1;UBERON:0004709,2.16e-09,1;UBERON:0002529,2.16e-09,1;UBERON:0010538,2.16e-09,1;UBERON:0003661,2.16e-09,1;UBERON:0010890,2.16e-09,1;UBERON:0002471,2.16e-09,1;UBERON:0001383,2.16e-09,1;UBERON:0004357,2.16e-09,1;UBERON:0004347,2.16e-09,1;UBERON:0005420,2.16e-09,1;UBERON:0005732,2.16e-09,1;UBERON:0010758,2.16e-09,1;UBERON:0010707,2.16e-09,1;UBERON:0000978,2.16e-09,1;UBERON:0002103,2.16e-09,1;UBERON:0001665,2.16e-09,1;UBERON:0003823,2.16e-09,1;UBERON:0000154,2.16e-09,1;UBERON:0010709,2.16e-09,1;UBERON:0005733,2.16e-09,1;UBERON:0005730,2.16e-09,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0.730310090387373,1.46379839637152,0,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0,0.157421562627358,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.822335776043652,0.309706370895104,0.28769239232215,0.512321413058201,0,0,1.29096936716765,0,0.188242339542605,0.545812300115692,0.224723484445085,0.918251677112708,0,0,0.659702600373432,0.598390972864896,0,0,1.70215567407342,0,0,2.08593167368081,0.65156653411535,0,0,0.632924774881769,0,0.212604299965044,0,0,0.300353785683013,0,0.285012743741249,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,1.05353633910031,0.196709770113833,0,0,1.17030546773475,0,0,0,0.557052284425868,0.883817722424512,0.443067789167242,0,1.92136979588513,0.910415432919148,1.97325485524411,0,0,0,1.87278579662799,2.09071047609954,0.113309342697566,0,0,0.253019692019503,0,0,0,0.451725357233318,0,0,0,0,0.201606743224732,0,0,0,0,1.02290049474824,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0,0.312160076830321,0,0,0,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0.339121184620975,0,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0.709840800239063,0,0.964044119533928,0.661763836394364,1.30727666455444,0,0.404493924480493,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.587043471179108,0,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.415941723061614,1.07057393278297,1.26161932027148,0.468565659970853,0,0,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.392996164052485,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0.973865820823666,0,0,0,0,1.86220955581764,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0.576361668616424,0,0,0,0,0,0,0.209205692624666,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,1.37539436597234,2.49264202817511,1.1248694577575,0.77380195455795,0,1.0063040627978,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0.265841714557995,0.521745061811734,0,1.14241563650639,0,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0.368211900503681,1.258915569475,0,0,0,0,0,0.33946505990805,0,0.371807292777007,1.11728983594649,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.223710863595585,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr9:128846811..128846812,+ | |short_description=p@chr9:128846811..128846812,+ | ||
}} | }} |
Latest revision as of 22:45, 31 July 2015
Short description: | p@chr9:128846811..128846812, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:128846811..128846812, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.11e-12 | 6 |
sensory epithelial cell | 2.11e-12 | 6 |
olfactory epithelial cell | 2.11e-12 | 6 |
smooth muscle cell of the esophagus | 1.69e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 2.16e-09 | 1 |
soleus muscle | 2.16e-09 | 1 |
appendage | 2.16e-09 | 1 |
lower limb segment | 2.16e-09 | 1 |
multi-limb segment region | 2.16e-09 | 1 |
hindlimb muscle | 2.16e-09 | 1 |
hindlimb zeugopod muscle | 2.16e-09 | 1 |
paired limb/fin | 2.16e-09 | 1 |
limb | 2.16e-09 | 1 |
pelvic appendage | 2.16e-09 | 1 |
limb segment | 2.16e-09 | 1 |
paired limb/fin segment | 2.16e-09 | 1 |
limb muscle | 2.16e-09 | 1 |
pelvic complex muscle | 2.16e-09 | 1 |
zeugopod | 2.16e-09 | 1 |
muscle of leg | 2.16e-09 | 1 |
paired limb/fin bud | 2.16e-09 | 1 |
limb bud | 2.16e-09 | 1 |
pelvic appendage bud | 2.16e-09 | 1 |
limb/fin field | 2.16e-09 | 1 |
subdivision of organism along appendicular axis | 2.16e-09 | 1 |
appendage girdle complex | 2.16e-09 | 1 |
leg | 2.16e-09 | 1 |
hindlimb | 2.16e-09 | 1 |
triceps surae | 2.16e-09 | 1 |
hindlimb zeugopod | 2.16e-09 | 1 |
posterior region of body | 2.16e-09 | 1 |
pelvic complex | 2.16e-09 | 1 |
limb field | 2.16e-09 | 1 |
hindlimb/pelvic fin field | 2.16e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.72e-09 | 1 |
keratoacanthoma | 5.72e-09 | 1 |