FFCP PHASE1:Hg19::chrM:1604..1614,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrM:1604..1614,+ to FFCP PHASE1:Hg19::chrM:1604..1614,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc004cor.1_5end | |||
|cluster_id=chrM:1604..1614,+ | |||
|coexpression_cluster_id=C256 | |||
|description=CAGE_peak_1_at_uc004cor.1_5end | |||
|id=chrM:1604..1614,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.33e-27!42;CL:0000860!1.70e-26!45;CL:0000839!7.96e-21!70;CL:0000557!2.33e-20!71;CL:0002009!2.17e-19!65;CL:0002194!3.16e-18!63;CL:0000576!3.16e-18!63;CL:0000040!3.16e-18!63;CL:0000559!3.16e-18!63;CL:0000766!1.73e-17!76;CL:0000763!2.65e-17!112;CL:0000049!2.65e-17!112;CL:0002031!1.32e-11!124;CL:0002032!1.48e-10!165;CL:0000837!1.48e-10!165;CL:0000738!1.96e-10!140;CL:0000037!3.00e-10!172;CL:0000566!3.00e-10!172;CL:0000988!5.32e-09!182;CL:0002087!8.74e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-40;33!CL:0002057;1.19e-40;33!CL:0000473;3.49e-33;39!CL:0000234;3.49e-33;39!CL:0000576;1.23e-23;48!CL:0000766;2.57e-16;69!CL:0000763;3.29e-09;100!CL:0000453;1.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.18e-44,48;CL:0000234,3.18e-44,48;CL:0000860,3.54e-44,42;CL:0002057,3.54e-44,42;CL:0000839,6.12e-36,66;CL:0000557,1.99e-35,67;CL:0002009,1.39e-34,61;CL:0002194,1.75e-32,59;CL:0000576,1.75e-32,59;CL:0000040,1.75e-32,59;CL:0000559,1.75e-32,59;CL:0000766,1.04e-31,72;CL:0000763,1.70e-29,108;CL:0000049,1.70e-29,108;CL:0002031,6.35e-16,120;CL:0000738,5.45e-15,136;CL:0002032,7.20e-15,161;CL:0000837,7.20e-15,161;CL:0000037,1.41e-13,168;CL:0000988,4.38e-12,177;CL:0002087,2.73e-11,115;CL:0000453,1.07e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.56e-32;42!CL:0000049;5.28e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.21e-18!80;UBERON:0001474!2.98e-15!86;UBERON:0001049!1.14e-14!57;UBERON:0005068!1.14e-14!57;UBERON:0006241!1.14e-14!57;UBERON:0007135!1.14e-14!57;UBERON:0002390!1.28e-14!102;UBERON:0003061!1.28e-14!102;UBERON:0002193!7.77e-14!112;UBERON:0004765!2.94e-13!101;UBERON:0001434!2.94e-13!101;UBERON:0002780!3.22e-13!41;UBERON:0001890!3.22e-13!41;UBERON:0006240!3.22e-13!41;UBERON:0003080!1.31e-12!42;UBERON:0002020!1.85e-12!34;UBERON:0003528!1.85e-12!34;UBERON:0002405!2.91e-12!115;UBERON:0002616!1.12e-11!59;UBERON:0002791!3.04e-11!33;UBERON:0001017!3.84e-11!82;UBERON:0001893!1.26e-10!34;UBERON:0002346!2.84e-10!90;UBERON:0005743!2.95e-10!86;UBERON:0001869!3.53e-10!32;UBERON:0000073!3.57e-10!94;UBERON:0001016!3.57e-10!94;UBERON:0007023!6.50e-10!115;UBERON:0003075!9.24e-10!86;UBERON:0007284!9.24e-10!86;UBERON:0002619!1.34e-09!22;UBERON:0000955!2.15e-09!69;UBERON:0006238!2.15e-09!69;UBERON:0003056!2.78e-09!61;UBERON:0001950!3.23e-08!20;UBERON:0000956!1.17e-07!25;UBERON:0000203!1.17e-07!25;UBERON:0002420!6.52e-07!9;UBERON:0007245!6.52e-07!9;UBERON:0010009!6.52e-07!9;UBERON:0010011!6.52e-07!9;UBERON:0000454!6.52e-07!9;UBERON:0002308!8.13e-07!9;UBERON:0000125!8.13e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.29e-09;34!UBERON:0002020;1.29e-09;34!UBERON:0002420;1.80e-09;9!UBERON:0007245;1.80e-09;9!UBERON:0010009;1.80e-09;9!UBERON:0010011;1.80e-09;9!UBERON:0000454;1.80e-09;9!UBERON:0000125;2.46e-09;9!UBERON:0002308;2.46e-09;9!UBERON:0002791;1.77e-08;32!UBERON:0000073;5.70e-08;53!UBERON:0002616;5.70e-08;53!UBERON:0002780;7.33e-08;41!UBERON:0001890;7.33e-08;41!UBERON:0001869;1.09e-07;32!UBERON:0001893;1.49e-07;34!UBERON:0009663;5.66e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.85e-29,76;UBERON:0001474,3.18e-26,82;UBERON:0004765,2.78e-25,90;UBERON:0002405,8.71e-24,93;UBERON:0001434,2.94e-22,100;UBERON:0002390,1.44e-20,98;UBERON:0003061,1.44e-20,98;UBERON:0002193,2.44e-19,108;UBERON:0001049,1.37e-13,56;UBERON:0005068,1.37e-13,56;UBERON:0006241,1.37e-13,56;UBERON:0007135,1.37e-13,56;UBERON:0000073,1.96e-13,53;UBERON:0002616,1.96e-13,53;UBERON:0003528,3.81e-11,34;UBERON:0002020,3.81e-11,34;UBERON:0002780,6.73e-11,41;UBERON:0001890,6.73e-11,41;UBERON:0003080,6.73e-11,41;UBERON:0006240,6.73e-11,41;UBERON:0002204,7.92e-11,167;UBERON:0001017,1.99e-10,81;UBERON:0002791,2.05e-09,32;UBERON:0001016,2.19e-09,89;UBERON:0002420,2.27e-09,9;UBERON:0007245,2.27e-09,9;UBERON:0010009,2.27e-09,9;UBERON:0010011,2.27e-09,9;UBERON:0000454,2.27e-09,9;UBERON:0000955,2.76e-09,68;UBERON:0006238,2.76e-09,68;UBERON:0000125,3.22e-09,9;UBERON:0002308,3.22e-09,9;UBERON:0003075,6.03e-09,82;UBERON:0007284,6.03e-09,82;UBERON:0001893,1.33e-08,34;UBERON:0001869,2.08e-08,32;UBERON:0002346,3.73e-08,86;UBERON:0003056,1.10e-07,61;UBERON:0009663,6.74e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,4.70627602516243,4.82155622419182,2.19093027116212,1.46379839637152,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,1.54816123316076,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0.217010870715852,0,0,0,3.34415949192999,9.44689859222024,8.49044214157357,5.57829688573643,9.86802931252382,10.8397229813286,9.78154133895312,6.91633907628572,5.20260905754887,10.6871161028352,9.68227025375739,23.0225027210381,11.4827827120989,5.73102915121476,6.74170453335254,11.0190201253525,6.73950956859797,17.9014395223732,4.61791820261403,5.78444607102732,6.81959600852311,17.7027635563436,13.0498601678962,13.7020894779026,14.5724225848911,34.4178726157333,6.5156653411535,9.6863920421339,4.78760926783834,10.4432587855492,2.5350634357433,2.12604299965044,6.28975936525128,1.34794357375794,2.4028302854641,4.17886525412408,0.285012743741249,3.38158351238453,4.38393969035121,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,1.05353633910031,0,0,0,1.83905144929746,0.32592226663359,0,3.89653456815823,1.55974639639243,0.883817722424512,0.886135578334485,1.08321545506006,1.79327847615945,2.86130564631732,2.79544437826249,2.21080014228679,0.869409257205157,0.444859689486181,0,0,1.35971211237079,0,0,2.53019692019503,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53164498361899,0,0,0,1.45481451136931,0,0,0,0,0,0,0,0,0,0,1.7662459561294,4.01475094983413,0,0,0,0,0,0.354920400119532,1.18009283054671,1.20505514941741,0.441175890929576,1.30727666455444,1.66089433377768,0.808987848960987,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,1.3725424823882,0,0,0.201057944823262,0.0925884451585296,0,0,0,1.04337364477569,0.117408694235822,0,1.85194205030644,4.56609965363036,0,0,0,0,0,0,4.70349958956807,6.66342957039216,0,0,0,0,2.90559832243646,2.48793738648926,8.2148373447668,0.88369703398466,0.63497894292169,0,0,0,0,1.8020583470635,4.0015700568281,0,0,0,0.129271715757778,0,198.64614685066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,4.52031382288914,23.1917333431335,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.431255149719035,0,0.254094624222463,0,0,0,7.65526501983796,0,2.99161459204025,0,0,0,0,3.11956292296211,1.60586089917446,2.20783381047509,0.937131319941706,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.644566922551274,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,1.8300481571743,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,9.57095343709381,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0,0,0,0.79312517629427,0,0.962479855263359,0,0,0,0,0.159426272728822,0.199579371432817,0.191505370132367,0,7.79092656658933,0.280797178113459,0,0.156679895773023,77.6966878979208,4.9094615562465,0,0,0,0,0,0,0,0,0.278406173895242,0,11.0886828175153,0,0,0,0.293016358543788,0,0,0,1.43246690842614,1.18785872333055,0,141.168965982814,3.09472716103128,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,1.02044907978036,0,0,0,0,0.227586896570999,0.254253650292766,0.472775363535873,0,0,0.173624994933292,188.662915178348,1.4471572635049,100.703945969275,1.43753037910592,0,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0.179515288819544,0,1.27600463892768,0.732780747214898,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0.123563938946503,0.208843899010911,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0.242780379534093,0,0,0,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.410577285266046,0,0,0,0.137041924646751,0,0.253243183823515,0,0,0,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0.124252535565433,0,0,0,0,0,98.4689273484055,3.69644523008381,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0.0984274815147488,0,143.141344165675,4.63091580779357,2.25054407851027,1.92555211236127,1.66176135211674,4.27450393947851,3.86900977278975,0.364497339948148,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,62.4436679226289,2.11572162788304,0,0,0.320362237703084,0,0,0.496166021811951,0.197611631897944,0,0,1.08803560673895,1.0027595760908,0.612691153526923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| ||
|short_description=p1@uc004cor.1 | |||
}} | }} |
Latest revision as of 04:07, 1 August 2015
Short description: | p1@uc004cor.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc004cor.1_5end |
Coexpression cluster: | C256_occipital_caudate_amygdala_medial_thalamus_hippocampus_medulla |
Association with transcript: | 0bp_to_uc004cor.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.18e-44 | 48 |
phagocyte | 3.18e-44 | 48 |
classical monocyte | 3.54e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.54e-44 | 42 |
myeloid lineage restricted progenitor cell | 6.12e-36 | 66 |
granulocyte monocyte progenitor cell | 1.99e-35 | 67 |
macrophage dendritic cell progenitor | 1.39e-34 | 61 |
monopoietic cell | 1.75e-32 | 59 |
monocyte | 1.75e-32 | 59 |
monoblast | 1.75e-32 | 59 |
promonocyte | 1.75e-32 | 59 |
myeloid leukocyte | 1.04e-31 | 72 |
myeloid cell | 1.70e-29 | 108 |
common myeloid progenitor | 1.70e-29 | 108 |
hematopoietic lineage restricted progenitor cell | 6.35e-16 | 120 |
leukocyte | 5.45e-15 | 136 |
hematopoietic oligopotent progenitor cell | 7.20e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.20e-15 | 161 |
hematopoietic stem cell | 1.41e-13 | 168 |
hematopoietic cell | 4.38e-12 | 177 |
nongranular leukocyte | 2.73e-11 | 115 |
Langerhans cell | 1.07e-07 | 5 |