FFCP PHASE1:Mm9::chr14:102240028..102240056,+: Difference between revisions
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{{FFCP|EntrezGene=380928|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=0bp_to_ENSMUST00000159948_5end|description=CAGE_peak_7_at_Lmo7_5end|id=chr14:102240028..102240056,+|ontology_enrichment_celltype=CL:0002563!1.67e-07!9;CL:0002251!1.67e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,5.20e-10,9;CL:0002251,5.20e-10,9;CL:0000239,1.27e-07,6;CL:0000677,1.27e-07,6;CL:0000584,1.27e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.26e-12!43;UBERON:0000344!1.00e-11!15;UBERON:0005409!3.36e-11!59;UBERON:0001242!3.12e-10!13;UBERON:0000060!3.12e-10!13;UBERON:0001262!3.12e-10!13;UBERON:0004786!3.12e-10!13;UBERON:0003350!1.67e-07!9;UBERON:0004808!1.67e-07!9;UBERON:0001277!1.67e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.21e-27,31;UBERON:0005409,1.96e-21,47;UBERON:0000344,5.26e-16,15;UBERON:0001242,6.98e-14,13;UBERON:0001262,6.98e-14,13;UBERON:0004786,6.98e-14,13;UBERON:0003350,5.20e-10,9;UBERON:0004808,5.20e-10,9;UBERON:0001277,5.20e-10,9;UBERON:0004923,6.11e-09,24;UBERON:0000485,1.14e-07,11|phase1_expression=0,31.7567620951819,41.8599300238373,29.9439569193762,31.5564309866199,6.71517087647559,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,27.8386815660528,26.3820673227246,29.285830169866,18.9535278309993,19.8233534071018,15.9619672343354,12.8535366177565,13.9690221712842,0,0,0,7.51014211353314,4.82080471539628,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0.649776417447669,2.68816132258401,3.08977724289854,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,5.02409070763864,0,0,0,0,0,0.150722640552623,0.23517741427141,0,1.48316980640624,0,0.884610551949874,0.323533699894818,0.441683036920787,0,29.8226817948995,0,0,27.5893619625279,0,0,0,0,4.11750542536764,0.125654352112864,1.04294592115366,1.53429274398198,0,0.486723789203273,0.101839363850316,0,0,0,0,0,0.180062129805349,0.452114453507145,0.204109497453984,0,0,0.258703370739016,0,0,0,0.219195732427575,0,1.0447564995665,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.787056926989615,1.23413690309903,3.0229412817553,2.14618721119695,1.98501082024188,2.13927804887525,2.79084688934462,3.16168357228837,3.07019973593198,3.07370161407471,1.61047702512446,0.630869845692382,0,60.1362185030512,21.9493970330742,0,0.232236671860439,3.35055399437443,7.66397393568702,9.78463392917429,11.223311940641,22.7773949541366,13.9994111515409,14.5774421104156,15.9165177632921,13.2575579241002,30.5598598942435,23.9913235360911,21.5072575114717,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0.442655759869801,0.885660887877613,0.31399745568275,0.987177311374404,0.592905254174298,0,0,0,0,0,0.50925170356284,0.287696137450811,0,0,0,1.11642284300551,0.312037673114561,0.505157755894224,0.358794827043824,1.4473305640901,0.739012760666419,0,0.162964976442026,0.339490171550376,0.938760993154008,2.34508760418542,3.33261097240419,3.31727201358258,0.630540576424764,0.664394068946325,0.318909537314974,0.983179888294428,0.690739927463582,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,3.87642439752332,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0.63549621259146,2.42581237860458,0,0.161464426695906,0.482503399425247,0.358117032009409,0.656563598980245,22.1525435838687,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0.609958401380546,1.08005340821801,0.627264888043406,1.74690050996942,0.539457385539283,1.98368293740806,3.14107130380836,16.9795615012249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0.187682475451182,0.549454872801795,1.50057865355346,2.50786052017682,0,1.84130094602871,1.14579102687879,0.859265911718438,2.05524755931193,0.755393897389701,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,0,0,0,0.486213434136588,0,0,1.77797382241292,1.03017528619447,1.28367683836726,0.758091635291392,2.78827229879264,0.754505365544305,1.21733959710847,1.34452820050225,1.37845125493472,2.38146845641537,1.62238056322798,1.73618298417335,3.70877310722976,3.53277408322554,2.74295401908332,1.24233064311536,3.81497903915713,1.88950341622027,2.07040636913727,2.28459441307527,2.19513567447327,3.15683653725411,1.08643291076689,2.80571135828869,1.77952527186261,1.67457620038458,2.45538625901814,1.23949472948773,1.54325288784913,0.999242311751784,1.16965804222704,1.28922632428979,1.14772999241306,0.661774257358546,0.231867835620421|short_description=p7@Lmo7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:380928 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000159948_5end | |||
|cluster_id=chr14:102240028..102240056,+ | |||
|description=CAGE_peak_7_at_Lmo7_5end | |||
|id=chr14:102240028..102240056,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.67e-07!9;CL:0002251!1.67e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.20e-10,9;CL:0002251,5.20e-10,9;CL:0000239,1.27e-07,6;CL:0000677,1.27e-07,6;CL:0000584,1.27e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.26e-12!43;UBERON:0000344!1.00e-11!15;UBERON:0005409!3.36e-11!59;UBERON:0001242!3.12e-10!13;UBERON:0000060!3.12e-10!13;UBERON:0001262!3.12e-10!13;UBERON:0004786!3.12e-10!13;UBERON:0003350!1.67e-07!9;UBERON:0004808!1.67e-07!9;UBERON:0001277!1.67e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.21e-27,31;UBERON:0005409,1.96e-21,47;UBERON:0000344,5.26e-16,15;UBERON:0001242,6.98e-14,13;UBERON:0001262,6.98e-14,13;UBERON:0004786,6.98e-14,13;UBERON:0003350,5.20e-10,9;UBERON:0004808,5.20e-10,9;UBERON:0001277,5.20e-10,9;UBERON:0004923,6.11e-09,24;UBERON:0000485,1.14e-07,11 | |||
|phase1_expression=0,31.7567620951819,41.8599300238373,29.9439569193762,31.5564309866199,6.71517087647559,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,27.8386815660528,26.3820673227246,29.285830169866,18.9535278309993,19.8233534071018,15.9619672343354,12.8535366177565,13.9690221712842,0,0,0,7.51014211353314,4.82080471539628,6.53341940039581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0.649776417447669,2.68816132258401,3.08977724289854,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,5.02409070763864,0,0,0,0,0,0.150722640552623,0.23517741427141,0,1.48316980640624,0,0.884610551949874,0.323533699894818,0.441683036920787,0,29.8226817948995,0,0,27.5893619625279,0,0,0,0,4.11750542536764,0.125654352112864,1.04294592115366,1.53429274398198,0,0.486723789203273,0.101839363850316,0,0,0,0,0,0.180062129805349,0.452114453507145,0.204109497453984,0,0,0.258703370739016,0,0,0,0.219195732427575,0,1.0447564995665,0.411564272815887,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.787056926989615,1.23413690309903,3.0229412817553,2.14618721119695,1.98501082024188,2.13927804887525,2.79084688934462,3.16168357228837,3.07019973593198,3.07370161407471,1.61047702512446,0.630869845692382,0,60.1362185030512,21.9493970330742,0,0.232236671860439,3.35055399437443,7.66397393568702,9.78463392917429,11.223311940641,22.7773949541366,13.9994111515409,14.5774421104156,15.9165177632921,13.2575579241002,30.5598598942435,23.9913235360911,21.5072575114717,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.140271639780637,0.442655759869801,0.885660887877613,0.31399745568275,0.987177311374404,0.592905254174298,0,0,0,0,0,0.50925170356284,0.287696137450811,0,0,0,1.11642284300551,0.312037673114561,0.505157755894224,0.358794827043824,1.4473305640901,0.739012760666419,0,0.162964976442026,0.339490171550376,0.938760993154008,2.34508760418542,3.33261097240419,3.31727201358258,0.630540576424764,0.664394068946325,0.318909537314974,0.983179888294428,0.690739927463582,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,3.87642439752332,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0.63549621259146,2.42581237860458,0,0.161464426695906,0.482503399425247,0.358117032009409,0.656563598980245,22.1525435838687,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0.609958401380546,1.08005340821801,0.627264888043406,1.74690050996942,0.539457385539283,1.98368293740806,3.14107130380836,16.9795615012249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,0,0,0,0,0.187682475451182,0.549454872801795,1.50057865355346,2.50786052017682,0,1.84130094602871,1.14579102687879,0.859265911718438,2.05524755931193,0.755393897389701,0.675022500231806,1.35096360967266,1.35942722695261,0.51776031175182,0,0,0,0.486213434136588,0,0,1.77797382241292,1.03017528619447,1.28367683836726,0.758091635291392,2.78827229879264,0.754505365544305,1.21733959710847,1.34452820050225,1.37845125493472,2.38146845641537,1.62238056322798,1.73618298417335,3.70877310722976,3.53277408322554,2.74295401908332,1.24233064311536,3.81497903915713,1.88950341622027,2.07040636913727,2.28459441307527,2.19513567447327,3.15683653725411,1.08643291076689,2.80571135828869,1.77952527186261,1.67457620038458,2.45538625901814,1.23949472948773,1.54325288784913,0.999242311751784,1.16965804222704,1.28922632428979,1.14772999241306,0.661774257358546,0.231867835620421 | |||
|short_description=p7@Lmo7 | |||
}} |
Revision as of 21:41, 3 August 2015
Short description: | p7@Lmo7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Lmo7_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000159948_5end |
EntrezGene: | 380928 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.20e-10 | 9 |
epithelial cell of alimentary canal | 5.20e-10 | 9 |
brush border epithelial cell | 1.27e-07 | 6 |
gut absorptive cell | 1.27e-07 | 6 |
enterocyte | 1.27e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.21e-27 | 31 |
gastrointestinal system | 1.96e-21 | 47 |
mucosa | 5.26e-16 | 15 |
intestinal mucosa | 6.98e-14 | 13 |
wall of intestine | 6.98e-14 | 13 |
gastrointestinal system mucosa | 6.98e-14 | 13 |
epithelium of mucosa | 5.20e-10 | 9 |
gastrointestinal system epithelium | 5.20e-10 | 9 |
intestinal epithelium | 5.20e-10 | 9 |
organ component layer | 6.11e-09 | 24 |
simple columnar epithelium | 1.14e-07 | 11 |