FFCP PHASE1:Mm9::chr16:4886135..4886150,+: Difference between revisions
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{{FFCP|EntrezGene=17237|HGNC=|MCL_coexpression_id=1|UniProt=Q9D074|association_with_transcript=35bp_to_NM_001252437,NM_029657_5end|description=CAGE_peak_4_at_Mgrn1_5end|id=chr16:4886135..4886150,+|ontology_enrichment_celltype=CL:0000117!2.03e-12!23;CL:0000337!2.03e-12!23;CL:0000540!2.61e-07!33;CL:0000047!2.61e-07!33;CL:0000031!2.61e-07!33;CL:0000404!2.61e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-19,23;CL:0000337,3.42e-19,23;CL:0000540,3.79e-11,33;CL:0000047,3.79e-11,33;CL:0000031,3.79e-11,33;CL:0000404,3.79e-11,33;CL:0000393,2.15e-08,39;CL:0000211,2.15e-08,39;CL:0002319,5.05e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.02e-19!52;UBERON:0005068!2.02e-19!52;UBERON:0006241!2.02e-19!52;UBERON:0007135!2.02e-19!52;UBERON:0000955!5.38e-19!50;UBERON:0006238!5.38e-19!50;UBERON:0002616!2.63e-18!49;UBERON:0002020!3.72e-18!34;UBERON:0001017!1.50e-17!73;UBERON:0005743!1.50e-17!73;UBERON:0000073!2.99e-17!75;UBERON:0001016!2.99e-17!75;UBERON:0002346!3.08e-17!71;UBERON:0003075!3.08e-17!71;UBERON:0007284!3.08e-17!71;UBERON:0003056!1.56e-16!49;UBERON:0003080!2.00e-16!40;UBERON:0000033!2.14e-16!63;UBERON:0002780!8.00e-16!39;UBERON:0001890!8.00e-16!39;UBERON:0006240!8.00e-16!39;UBERON:0002791!8.77e-16!29;UBERON:0003528!8.77e-16!29;UBERON:0001893!8.77e-16!29;UBERON:0004121!2.62e-14!102;UBERON:0000924!2.62e-14!102;UBERON:0006601!2.62e-14!102;UBERON:0000956!3.93e-11!21;UBERON:0001869!3.93e-11!21;UBERON:0000203!3.93e-11!21;UBERON:0002619!1.54e-09!17;UBERON:0002021!5.29e-08!10;UBERON:0000411!5.29e-08!10;UBERON:0001950!5.29e-08!10;UBERON:0000153!7.05e-08!94;UBERON:0007811!7.87e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.89e-28,54;UBERON:0002020,9.02e-28,34;UBERON:0001049,1.09e-25,52;UBERON:0005068,1.09e-25,52;UBERON:0006241,1.09e-25,52;UBERON:0007135,1.09e-25,52;UBERON:0003528,1.23e-23,29;UBERON:0002791,1.23e-23,29;UBERON:0001893,1.23e-23,29;UBERON:0001017,1.28e-23,73;UBERON:0002346,7.83e-23,64;UBERON:0003075,7.83e-23,64;UBERON:0007284,7.83e-23,64;UBERON:0001016,1.44e-22,75;UBERON:0000955,7.31e-22,47;UBERON:0006238,7.31e-22,47;UBERON:0002616,8.67e-21,46;UBERON:0003080,2.21e-20,40;UBERON:0002780,2.06e-19,39;UBERON:0001890,2.06e-19,39;UBERON:0006240,2.06e-19,39;UBERON:0003056,3.09e-19,49;UBERON:0010371,3.13e-18,73;UBERON:0004121,5.17e-18,95;UBERON:0000924,5.17e-18,95;UBERON:0006601,5.17e-18,95;UBERON:0000956,1.18e-15,21;UBERON:0001869,1.18e-15,21;UBERON:0000203,1.18e-15,21;UBERON:0002619,4.14e-14,17;UBERON:0010314,4.23e-13,92;UBERON:0002021,8.27e-13,10;UBERON:0000411,8.27e-13,10;UBERON:0001950,8.27e-13,10;UBERON:0002420,3.22e-09,8;UBERON:0007245,3.22e-09,8;UBERON:0010009,3.22e-09,8;UBERON:0010011,3.22e-09,8;UBERON:0000454,3.22e-09,8|phase1_expression=0.160148847104794,1.39590163055744,0.909998478779072,1.20985684522732,1.00179145989269,0.671517087647559,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0.333109761815663,0.202475267389826,0,0.788655413395594,0.822686601634433,1.69755860719212,1.02051948181284,0.198581902401771,0,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,1.07735616342945,1.14014051673824,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,1.36609096991689,0.485510353031154,0.251793635951155,0,0.183546752161682,0,0.65407546914134,0.439372365468944,0.58328969722285,0.139986421625363,0,1.51004345451963,0,0,0.257259436035947,0,0,3.64169629547276,4.23192783417626,5.70448263155561,0.338844532069132,0,1.7997994345628,0.988866362566974,0,0.599200221036809,0.768436610643109,0.829516898467821,2.16009501330705,2.52389953621658,1.42825492201902,2.87129103237098,1.5923803897944,2.58782771749238,1.83843757322004,6.60695285996332,4.46905683298157,6.45147439676223,3.56092976871523,3.7509933876988,5.2091337055676,4.18774498502071,6.75315132038016,4.12555268997387,2.65165726926301,2.56269025438385,3.54158947068071,0.605809546665472,0.302286240427142,0.289864488701678,0,0,0,0,0,0.140444420131752,1.02258193546835,0,0,0.281686839553361,1.28326477414318,5.09610479413291,7.11066703153331,0,0,0,0.79928715803342,0.776813650941515,0.593768556259299,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,2.09446706813455,1.02182822083437,0.359445373517761,0,0,5.69204429738326,9.60751265919116,5.90575454930463,7.12679712788333,12.5300574091862,3.32460871295296,5.19172041816825,0.305518091550949,0,1.0108910337347,0.210441855886474,0.650602214813519,0.919608417733892,0,1.05493372485001,0.884474488967262,1.15302348256365,1.40552586839593,1.55222022443409,1.07783996466421,0.756424320671277,0.527853372491847,0.43839146485515,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0,0.568326998791185,0.207125772535502,0,0.720248245844059,1.18372367792605,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,1.16765342367169,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17237 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D074 | |||
|association_with_transcript=35bp_to_NM_001252437,NM_029657_5end | |||
|cluster_id=chr16:4886135..4886150,+ | |||
|description=CAGE_peak_4_at_Mgrn1_5end | |||
|id=chr16:4886135..4886150,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.03e-12!23;CL:0000337!2.03e-12!23;CL:0000540!2.61e-07!33;CL:0000047!2.61e-07!33;CL:0000031!2.61e-07!33;CL:0000404!2.61e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-19,23;CL:0000337,3.42e-19,23;CL:0000540,3.79e-11,33;CL:0000047,3.79e-11,33;CL:0000031,3.79e-11,33;CL:0000404,3.79e-11,33;CL:0000393,2.15e-08,39;CL:0000211,2.15e-08,39;CL:0002319,5.05e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.02e-19!52;UBERON:0005068!2.02e-19!52;UBERON:0006241!2.02e-19!52;UBERON:0007135!2.02e-19!52;UBERON:0000955!5.38e-19!50;UBERON:0006238!5.38e-19!50;UBERON:0002616!2.63e-18!49;UBERON:0002020!3.72e-18!34;UBERON:0001017!1.50e-17!73;UBERON:0005743!1.50e-17!73;UBERON:0000073!2.99e-17!75;UBERON:0001016!2.99e-17!75;UBERON:0002346!3.08e-17!71;UBERON:0003075!3.08e-17!71;UBERON:0007284!3.08e-17!71;UBERON:0003056!1.56e-16!49;UBERON:0003080!2.00e-16!40;UBERON:0000033!2.14e-16!63;UBERON:0002780!8.00e-16!39;UBERON:0001890!8.00e-16!39;UBERON:0006240!8.00e-16!39;UBERON:0002791!8.77e-16!29;UBERON:0003528!8.77e-16!29;UBERON:0001893!8.77e-16!29;UBERON:0004121!2.62e-14!102;UBERON:0000924!2.62e-14!102;UBERON:0006601!2.62e-14!102;UBERON:0000956!3.93e-11!21;UBERON:0001869!3.93e-11!21;UBERON:0000203!3.93e-11!21;UBERON:0002619!1.54e-09!17;UBERON:0002021!5.29e-08!10;UBERON:0000411!5.29e-08!10;UBERON:0001950!5.29e-08!10;UBERON:0000153!7.05e-08!94;UBERON:0007811!7.87e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.89e-28,54;UBERON:0002020,9.02e-28,34;UBERON:0001049,1.09e-25,52;UBERON:0005068,1.09e-25,52;UBERON:0006241,1.09e-25,52;UBERON:0007135,1.09e-25,52;UBERON:0003528,1.23e-23,29;UBERON:0002791,1.23e-23,29;UBERON:0001893,1.23e-23,29;UBERON:0001017,1.28e-23,73;UBERON:0002346,7.83e-23,64;UBERON:0003075,7.83e-23,64;UBERON:0007284,7.83e-23,64;UBERON:0001016,1.44e-22,75;UBERON:0000955,7.31e-22,47;UBERON:0006238,7.31e-22,47;UBERON:0002616,8.67e-21,46;UBERON:0003080,2.21e-20,40;UBERON:0002780,2.06e-19,39;UBERON:0001890,2.06e-19,39;UBERON:0006240,2.06e-19,39;UBERON:0003056,3.09e-19,49;UBERON:0010371,3.13e-18,73;UBERON:0004121,5.17e-18,95;UBERON:0000924,5.17e-18,95;UBERON:0006601,5.17e-18,95;UBERON:0000956,1.18e-15,21;UBERON:0001869,1.18e-15,21;UBERON:0000203,1.18e-15,21;UBERON:0002619,4.14e-14,17;UBERON:0010314,4.23e-13,92;UBERON:0002021,8.27e-13,10;UBERON:0000411,8.27e-13,10;UBERON:0001950,8.27e-13,10;UBERON:0002420,3.22e-09,8;UBERON:0007245,3.22e-09,8;UBERON:0010009,3.22e-09,8;UBERON:0010011,3.22e-09,8;UBERON:0000454,3.22e-09,8 | |||
|phase1_expression=0.160148847104794,1.39590163055744,0.909998478779072,1.20985684522732,1.00179145989269,0.671517087647559,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0.333109761815663,0.202475267389826,0,0.788655413395594,0.822686601634433,1.69755860719212,1.02051948181284,0.198581902401771,0,0.319984845586813,0.22940928106717,1.14846392823004,0.86152399231815,1.07735616342945,1.14014051673824,0.252030129759931,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,1.36609096991689,0.485510353031154,0.251793635951155,0,0.183546752161682,0,0.65407546914134,0.439372365468944,0.58328969722285,0.139986421625363,0,1.51004345451963,0,0,0.257259436035947,0,0,3.64169629547276,4.23192783417626,5.70448263155561,0.338844532069132,0,1.7997994345628,0.988866362566974,0,0.599200221036809,0.768436610643109,0.829516898467821,2.16009501330705,2.52389953621658,1.42825492201902,2.87129103237098,1.5923803897944,2.58782771749238,1.83843757322004,6.60695285996332,4.46905683298157,6.45147439676223,3.56092976871523,3.7509933876988,5.2091337055676,4.18774498502071,6.75315132038016,4.12555268997387,2.65165726926301,2.56269025438385,3.54158947068071,0.605809546665472,0.302286240427142,0.289864488701678,0,0,0,0,0,0.140444420131752,1.02258193546835,0,0,0.281686839553361,1.28326477414318,5.09610479413291,7.11066703153331,0,0,0,0.79928715803342,0.776813650941515,0.593768556259299,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0.292780797011547,2.09446706813455,1.02182822083437,0.359445373517761,0,0,5.69204429738326,9.60751265919116,5.90575454930463,7.12679712788333,12.5300574091862,3.32460871295296,5.19172041816825,0.305518091550949,0,1.0108910337347,0.210441855886474,0.650602214813519,0.919608417733892,0,1.05493372485001,0.884474488967262,1.15302348256365,1.40552586839593,1.55222022443409,1.07783996466421,0.756424320671277,0.527853372491847,0.43839146485515,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0,0.568326998791185,0.207125772535502,0,0.720248245844059,1.18372367792605,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,1.16765342367169,0.16455984991348,0.164167464079095,0.405344047729279,0.146199987425332,0.439100230582101,0.671032093801859,6.09840850835969,3.39585220851639,0.330418782983798,1.32225283331772,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,1.89811624617805,0,0.754005626400808,0.994782360205754,0.779856348476481,0.898819408654221,0,0.597423819763102,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.841629838683823,0.569128834118316,0.442830443938806,0.470996183524124,0.616985819609003,0.296452627087149,0,0.393117990226406,0,0,0.482354319504834,0,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.624075346229121,0.757736633841335,0,0,0.184753190166605,0.37898282354097,0.977789858652155,0.169745085775188,0,0.167506257441816,0.476087281772027,0.585400943573396,0,0.44292937929755,0.318909537314974,0.327726629431476,0,0.723245292907558,0,1.08781136763742,0.491764273019036,0.551873492609465,4.97706828962155,4.80567915028033,0.491804836130026,0.504941854408746,0.315508219416257,0.780877488593277,0.215423397732799,0,0.445597348164788,0.566153061577665,0.404810701674894,0,0,7.71171159412337,0.425820255624806,0.178065603667255,0.651547837414304,0.164970122972535,2.65490276679926,0,0.604647113929502,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.900305470156551,0.517434735131018,1.07168517515796,0.177340233642274,0.356737635204141,0.658196082408484,0.913394847343798,0,0,0,0.8244312647074,0.161464426695906,0.301564624640779,0.477489376012546,0.656563598980245,0,3.33765543618917,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0.228778173206523,0.509935289981566,0.559805809294632,0.276399947608848,0.954670618015114,0.158167996790568,0.406638934253697,0.216010681643603,0.836353184057875,0.218362563746178,0.674321731924103,0.330613822901344,0.523511883968059,0.388844919875379,0,0.56369293868419,1.19613236835183,0.165458490457098,0.388902376688095,0.387479470433193,0,0.469428954583016,0.781226309063701,0.524296722128554,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0.579568782096571,0.563047426353546,0.36630324853453,0,0,6.21227026878773,5.9842280745933,10.3121192419091,6.18671456437275,10.2762377965596,7.55393897389701,10.1253375034771,10.8077088773813,6.34399372577886,10.8729665467882,0.726511433089237,0.399024873401031,0.853668028770671,0,1.04806581313991,0.735374033800057,1.77797382241292,1.03017528619447,1.60459604795908,1.01078884705519,0.50695859978048,1.50901073108861,0.37456602987953,0.640251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| |||
|short_description=p4@Mgrn1 | |||
}} |
Revision as of 21:53, 3 August 2015
Short description: | p4@Mgrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mgrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 35bp_to_NM_001252437, NM_029657_5end |
EntrezGene: | 17237 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.42e-19 | 23 |
neuroblast (sensu Vertebrata) | 3.42e-19 | 23 |
neuron | 3.79e-11 | 33 |
neuronal stem cell | 3.79e-11 | 33 |
neuroblast | 3.79e-11 | 33 |
electrically signaling cell | 3.79e-11 | 33 |
electrically responsive cell | 2.15e-08 | 39 |
electrically active cell | 2.15e-08 | 39 |
neural cell | 5.05e-07 | 43 |