FFCP PHASE1:Mm9::chr16:7069831..7069842,+: Difference between revisions
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{{FFCP|EntrezGene=268859|HGNC=|MCL_coexpression_id=35|UniProt=Q9JJ43|association_with_transcript=-85bp_to_ENSMUST00000056416,ENSMUST00000092375,ENSMUST00000096292,ENSMUST00000170095,NM_183188,uc007ycf.2,uc007ycg.2,uc007ych.2_5end|description=CAGE_peak_23_at_Rbfox1_5end|id=chr16:7069831..7069842,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.46e-15!18;UBERON:0000948!4.46e-15!18;UBERON:0005498!4.46e-15!18;UBERON:0004140!4.46e-15!18;UBERON:0009881!4.46e-15!18;UBERON:0004141!4.46e-15!18;UBERON:0003084!4.46e-15!18;UBERON:0007005!4.46e-15!18;UBERON:0004139!4.46e-15!18;UBERON:0004291!4.46e-15!18;UBERON:0004535!4.55e-11!23;UBERON:0001009!4.55e-11!23;UBERON:0005418!5.56e-10!5;UBERON:0002472!5.56e-10!5;UBERON:0008784!5.56e-10!5;UBERON:0006058!5.56e-10!5;UBERON:0004709!5.56e-10!5;UBERON:0005420!5.56e-10!5;UBERON:0006057!5.56e-10!5;UBERON:0000978!5.56e-10!5;UBERON:0002103!5.56e-10!5;UBERON:0000376!5.56e-10!5;UBERON:0000154!5.56e-10!5;UBERON:0005730!5.56e-10!5;UBERON:0002529!3.22e-08!6;UBERON:0000981!4.26e-08!4;UBERON:0002495!4.26e-08!4;UBERON:0003608!4.26e-08!4;UBERON:0003826!4.26e-08!4;UBERON:0008202!4.26e-08!4;UBERON:0004375!4.26e-08!4;UBERON:0002428!4.26e-08!4;UBERON:0003464!4.26e-08!4;UBERON:0003606!4.26e-08!4;UBERON:0009749!4.26e-08!4;UBERON:0003860!4.26e-08!4;UBERON:0005856!4.26e-08!4;UBERON:0005866!4.26e-08!4;UBERON:0007828!4.26e-08!4;UBERON:0005254!4.26e-08!4;UBERON:0001271!4.26e-08!4;UBERON:0002091!4.26e-08!4;UBERON:0001464!4.26e-08!4;UBERON:0003285!4.26e-08!4;UBERON:0010129!4.26e-08!4;UBERON:0006234!4.26e-08!4;UBERON:0004872!9.34e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.35e-19,18;UBERON:0000948,1.35e-19,18;UBERON:0005498,1.35e-19,18;UBERON:0004140,1.35e-19,18;UBERON:0009881,1.35e-19,18;UBERON:0004141,1.35e-19,18;UBERON:0003084,1.35e-19,18;UBERON:0007005,1.35e-19,18;UBERON:0004139,1.35e-19,18;UBERON:0004291,1.35e-19,18;UBERON:0004535,2.37e-15,23;UBERON:0001009,2.37e-15,23;UBERON:0001374,2.31e-11,1;UBERON:0004252,2.31e-11,1;UBERON:0003663,2.31e-11,1;UBERON:0005090,2.31e-11,1;UBERON:0001630,2.31e-11,1;UBERON:0003661,2.31e-11,1;UBERON:0010890,2.31e-11,1;UBERON:0001383,2.31e-11,1;UBERON:0004872,1.07e-10,33;UBERON:0003103,3.42e-08,43;UBERON:0003914,1.74e-07,47;UBERON:0003081,6.06e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.700592054203017,1.31647879930784,1.64167464079095,2.75633952455909,3.07019973593198,1.75640092232841,2.68412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0.382576664137687,0.441182838239031,1.15933917810211|short_description=p23@Rbfox1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:268859 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JJ43 | |||
|association_with_transcript=-85bp_to_ENSMUST00000056416,ENSMUST00000092375,ENSMUST00000096292,ENSMUST00000170095,NM_183188,uc007ycf.2,uc007ycg.2,uc007ych.2_5end | |||
|cluster_id=chr16:7069831..7069842,+ | |||
|description=CAGE_peak_23_at_Rbfox1_5end | |||
|id=chr16:7069831..7069842,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.46e-15!18;UBERON:0000948!4.46e-15!18;UBERON:0005498!4.46e-15!18;UBERON:0004140!4.46e-15!18;UBERON:0009881!4.46e-15!18;UBERON:0004141!4.46e-15!18;UBERON:0003084!4.46e-15!18;UBERON:0007005!4.46e-15!18;UBERON:0004139!4.46e-15!18;UBERON:0004291!4.46e-15!18;UBERON:0004535!4.55e-11!23;UBERON:0001009!4.55e-11!23;UBERON:0005418!5.56e-10!5;UBERON:0002472!5.56e-10!5;UBERON:0008784!5.56e-10!5;UBERON:0006058!5.56e-10!5;UBERON:0004709!5.56e-10!5;UBERON:0005420!5.56e-10!5;UBERON:0006057!5.56e-10!5;UBERON:0000978!5.56e-10!5;UBERON:0002103!5.56e-10!5;UBERON:0000376!5.56e-10!5;UBERON:0000154!5.56e-10!5;UBERON:0005730!5.56e-10!5;UBERON:0002529!3.22e-08!6;UBERON:0000981!4.26e-08!4;UBERON:0002495!4.26e-08!4;UBERON:0003608!4.26e-08!4;UBERON:0003826!4.26e-08!4;UBERON:0008202!4.26e-08!4;UBERON:0004375!4.26e-08!4;UBERON:0002428!4.26e-08!4;UBERON:0003464!4.26e-08!4;UBERON:0003606!4.26e-08!4;UBERON:0009749!4.26e-08!4;UBERON:0003860!4.26e-08!4;UBERON:0005856!4.26e-08!4;UBERON:0005866!4.26e-08!4;UBERON:0007828!4.26e-08!4;UBERON:0005254!4.26e-08!4;UBERON:0001271!4.26e-08!4;UBERON:0002091!4.26e-08!4;UBERON:0001464!4.26e-08!4;UBERON:0003285!4.26e-08!4;UBERON:0010129!4.26e-08!4;UBERON:0006234!4.26e-08!4;UBERON:0004872!9.34e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.35e-19,18;UBERON:0000948,1.35e-19,18;UBERON:0005498,1.35e-19,18;UBERON:0004140,1.35e-19,18;UBERON:0009881,1.35e-19,18;UBERON:0004141,1.35e-19,18;UBERON:0003084,1.35e-19,18;UBERON:0007005,1.35e-19,18;UBERON:0004139,1.35e-19,18;UBERON:0004291,1.35e-19,18;UBERON:0004535,2.37e-15,23;UBERON:0001009,2.37e-15,23;UBERON:0001374,2.31e-11,1;UBERON:0004252,2.31e-11,1;UBERON:0003663,2.31e-11,1;UBERON:0005090,2.31e-11,1;UBERON:0001630,2.31e-11,1;UBERON:0003661,2.31e-11,1;UBERON:0010890,2.31e-11,1;UBERON:0001383,2.31e-11,1;UBERON:0004872,1.07e-10,33;UBERON:0003103,3.42e-08,43;UBERON:0003914,1.74e-07,47;UBERON:0003081,6.06e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.700592054203017,1.31647879930784,1.64167464079095,2.75633952455909,3.07019973593198,1.75640092232841,2.68412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.180938774784468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0.382576664137687,0.441182838239031,1.15933917810211 | |||
|short_description=p23@Rbfox1 | |||
}} |
Revision as of 01:11, 4 August 2015
Short description: | p23@Rbfox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_Rbfox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | -85bp_to_ENSMUST00000056416, ENSMUST00000092375, ENSMUST00000096292, ENSMUST00000170095, NM_183188, uc007ycf.2, uc007ycg.2, uc007ych.2_5end |
EntrezGene: | 268859 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.35e-19 | 18 |
heart | 1.35e-19 | 18 |
primitive heart tube | 1.35e-19 | 18 |
primary heart field | 1.35e-19 | 18 |
anterior lateral plate mesoderm | 1.35e-19 | 18 |
heart tube | 1.35e-19 | 18 |
heart primordium | 1.35e-19 | 18 |
cardiac mesoderm | 1.35e-19 | 18 |
cardiogenic plate | 1.35e-19 | 18 |
heart rudiment | 1.35e-19 | 18 |
cardiovascular system | 2.37e-15 | 23 |
circulatory system | 2.37e-15 | 23 |
biceps femoris | 2.31e-11 | 1 |
hindlimb stylopod muscle | 2.31e-11 | 1 |
hindlimb muscle | 2.31e-11 | 1 |
muscle structure | 2.31e-11 | 1 |
muscle organ | 2.31e-11 | 1 |
limb muscle | 2.31e-11 | 1 |
pelvic complex muscle | 2.31e-11 | 1 |
muscle of leg | 2.31e-11 | 1 |
splanchnic layer of lateral plate mesoderm | 1.07e-10 | 33 |
compound organ | 3.42e-08 | 43 |
epithelial tube | 1.74e-07 | 47 |
lateral plate mesoderm | 6.06e-07 | 87 |