FFCP PHASE1:Mm9::chr8:74047419..74047426,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=72|UniProt=|association_with_transcript=-45bp_to_ENSMUST00000166830_5end|description=CAGE_peak_1_at_ENSMUST00000166830_5end|id=chr8:74047419..74047426,+|ontology_enrichment_celltype=CL:0002076!2.03e-17!15;CL:0000066!2.48e-17!25;CL:0002563!1.51e-16!9;CL:0002251!1.51e-16!9;CL:0000223!1.44e-14!20;CL:0000239!3.11e-12!6;CL:0000677!3.11e-12!6;CL:0000212!3.11e-12!6;CL:0000584!3.11e-12!6;CL:0000063!2.96e-11!66;CL:0000075!2.38e-10!7;CL:0000068!1.46e-07!3;CL:0002202!1.46e-07!3;CL:0000069!1.46e-07!3;CL:0002632!1.46e-07!3;CL:0002368!1.46e-07!3;CL:0000307!1.46e-07!3;CL:0000377!1.46e-07!3;CL:0000553!1.70e-07!6;CL:0000556!1.70e-07!6;CL:0000349!2.23e-07!3;CL:0000351!2.23e-07!3;CL:0000473!9.89e-07!3;CL:0000627!9.89e-07!3;CL:0000682!9.89e-07!3|ontology_enrichment_celltype_v019_2=CL:0000066,4.79e-24,25;CL:0002076,2.05e-21,15;CL:0000239,5.75e-20,6;CL:0000677,5.75e-20,6;CL:0000584,5.75e-20,6;CL:0000223,7.36e-19,20;CL:0002563,2.03e-17,9;CL:0002251,2.03e-17,9;CL:0000075,4.88e-17,7;CL:0000068,6.51e-12,3;CL:0002202,6.51e-12,3;CL:0000069,6.51e-12,3;CL:0002632,6.51e-12,3;CL:0002368,6.51e-12,3;CL:0000307,6.51e-12,3;CL:0000377,6.51e-12,3;CL:0000349,1.34e-11,3;CL:0000351,1.34e-11,3;CL:0000682,1.73e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.90e-23!15;UBERON:0001242!1.15e-19!13;UBERON:0000060!1.15e-19!13;UBERON:0001262!1.15e-19!13;UBERON:0004786!1.15e-19!13;UBERON:0003350!1.51e-16!9;UBERON:0004808!1.51e-16!9;UBERON:0001277!1.51e-16!9;UBERON:0004923!2.91e-13!24;UBERON:0000485!3.53e-13!11;UBERON:0000014!4.34e-08!5;UBERON:0001003!4.34e-08!5;UBERON:0002097!4.34e-08!5;UBERON:0002199!4.34e-08!5;UBERON:0007029!4.34e-08!5;UBERON:0007376!4.34e-08!5;UBERON:0002416!4.34e-08!5;UBERON:0007383!4.34e-08!5;UBERON:0003126!1.46e-07!3;UBERON:0001005!1.46e-07!3;UBERON:0007196!1.46e-07!3;UBERON:0001558!1.46e-07!3;UBERON:0000064!1.72e-07!99;UBERON:0000358!2.23e-07!3;UBERON:0000307!2.23e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.78e-30,15;UBERON:0001242,1.21e-23,13;UBERON:0001262,1.21e-23,13;UBERON:0004786,1.21e-23,13;UBERON:0004923,8.39e-18,24;UBERON:0003350,2.03e-17,9;UBERON:0004808,2.03e-17,9;UBERON:0001277,2.03e-17,9;UBERON:0000485,4.27e-14,11;UBERON:0003126,6.51e-12,3;UBERON:0001005,6.51e-12,3;UBERON:0007196,6.51e-12,3;UBERON:0001558,6.51e-12,3;UBERON:0000358,1.34e-11,3;UBERON:0000307,1.34e-11,3;UBERON:0007010,1.34e-11,3;UBERON:0000160,8.35e-11,31;UBERON:0000331,3.92e-10,3;UBERON:0002116,3.92e-10,3;UBERON:0001204,3.92e-10,3;UBERON:0001168,3.92e-10,3;UBERON:0001962,4.17e-08,2;UBERON:0001961,4.17e-08,2;UBERON:0001744,4.17e-08,2;UBERON:0002108,1.03e-07,4|phase1_expression=0,11.8651638597383,9.09998478779072,13.9133537201142,14.0250804384977,3.18970616632591,11.9142446703718,0,0.985521055061667,0,0,0,0,0,0,0.607425802169478,0.699561878128147,2.05050407482854,1.50825876966313,1.27316895539409,0.0850432901510698,0,0,23.998863419011,16.5174682368362,9.76194338995534,5.1691439539089,6.89507944594845,5.32065574477847,1.00812051903972,8.20402889424627,0,0,0,0.288851619751275,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19456515144341,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.2175607966302,0,0,0,0,0,0,0,0,0,0,0,0,0,73.6069539438128,73.2210011223035,77.8507645322766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,26.6383144048878,24.4021689977774,30.3871155618982,0,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000166830}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-45bp_to_ENSMUST00000166830_5end | |||
|cluster_id=chr8:74047419..74047426,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000166830_5end | |||
|id=chr8:74047419..74047426,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.03e-17!15;CL:0000066!2.48e-17!25;CL:0002563!1.51e-16!9;CL:0002251!1.51e-16!9;CL:0000223!1.44e-14!20;CL:0000239!3.11e-12!6;CL:0000677!3.11e-12!6;CL:0000212!3.11e-12!6;CL:0000584!3.11e-12!6;CL:0000063!2.96e-11!66;CL:0000075!2.38e-10!7;CL:0000068!1.46e-07!3;CL:0002202!1.46e-07!3;CL:0000069!1.46e-07!3;CL:0002632!1.46e-07!3;CL:0002368!1.46e-07!3;CL:0000307!1.46e-07!3;CL:0000377!1.46e-07!3;CL:0000553!1.70e-07!6;CL:0000556!1.70e-07!6;CL:0000349!2.23e-07!3;CL:0000351!2.23e-07!3;CL:0000473!9.89e-07!3;CL:0000627!9.89e-07!3;CL:0000682!9.89e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.79e-24,25;CL:0002076,2.05e-21,15;CL:0000239,5.75e-20,6;CL:0000677,5.75e-20,6;CL:0000584,5.75e-20,6;CL:0000223,7.36e-19,20;CL:0002563,2.03e-17,9;CL:0002251,2.03e-17,9;CL:0000075,4.88e-17,7;CL:0000068,6.51e-12,3;CL:0002202,6.51e-12,3;CL:0000069,6.51e-12,3;CL:0002632,6.51e-12,3;CL:0002368,6.51e-12,3;CL:0000307,6.51e-12,3;CL:0000377,6.51e-12,3;CL:0000349,1.34e-11,3;CL:0000351,1.34e-11,3;CL:0000682,1.73e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.90e-23!15;UBERON:0001242!1.15e-19!13;UBERON:0000060!1.15e-19!13;UBERON:0001262!1.15e-19!13;UBERON:0004786!1.15e-19!13;UBERON:0003350!1.51e-16!9;UBERON:0004808!1.51e-16!9;UBERON:0001277!1.51e-16!9;UBERON:0004923!2.91e-13!24;UBERON:0000485!3.53e-13!11;UBERON:0000014!4.34e-08!5;UBERON:0001003!4.34e-08!5;UBERON:0002097!4.34e-08!5;UBERON:0002199!4.34e-08!5;UBERON:0007029!4.34e-08!5;UBERON:0007376!4.34e-08!5;UBERON:0002416!4.34e-08!5;UBERON:0007383!4.34e-08!5;UBERON:0003126!1.46e-07!3;UBERON:0001005!1.46e-07!3;UBERON:0007196!1.46e-07!3;UBERON:0001558!1.46e-07!3;UBERON:0000064!1.72e-07!99;UBERON:0000358!2.23e-07!3;UBERON:0000307!2.23e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.78e-30,15;UBERON:0001242,1.21e-23,13;UBERON:0001262,1.21e-23,13;UBERON:0004786,1.21e-23,13;UBERON:0004923,8.39e-18,24;UBERON:0003350,2.03e-17,9;UBERON:0004808,2.03e-17,9;UBERON:0001277,2.03e-17,9;UBERON:0000485,4.27e-14,11;UBERON:0003126,6.51e-12,3;UBERON:0001005,6.51e-12,3;UBERON:0007196,6.51e-12,3;UBERON:0001558,6.51e-12,3;UBERON:0000358,1.34e-11,3;UBERON:0000307,1.34e-11,3;UBERON:0007010,1.34e-11,3;UBERON:0000160,8.35e-11,31;UBERON:0000331,3.92e-10,3;UBERON:0002116,3.92e-10,3;UBERON:0001204,3.92e-10,3;UBERON:0001168,3.92e-10,3;UBERON:0001962,4.17e-08,2;UBERON:0001961,4.17e-08,2;UBERON:0001744,4.17e-08,2;UBERON:0002108,1.03e-07,4 | |||
|phase1_expression=0,11.8651638597383,9.09998478779072,13.9133537201142,14.0250804384977,3.18970616632591,11.9142446703718,0,0.985521055061667,0,0,0,0,0,0,0.607425802169478,0.699561878128147,2.05050407482854,1.50825876966313,1.27316895539409,0.0850432901510698,0,0,23.998863419011,16.5174682368362,9.76194338995534,5.1691439539089,6.89507944594845,5.32065574477847,1.00812051903972,8.20402889424627,0,0,0,0.288851619751275,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19456515144341,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,5.2175607966302,0,0,0,0,0,0,0,0,0,0,0,0,0,73.6069539438128,73.2210011223035,77.8507645322766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,26.6383144048878,24.4021689977774,30.3871155618982,0,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000166830 | |||
}} |
Latest revision as of 01:56, 4 August 2015
Short description: | p1@ENSMUST00000166830 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000166830_5end |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | -45bp_to_ENSMUST00000166830_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.79e-24 | 25 |
endo-epithelial cell | 2.05e-21 | 15 |
brush border epithelial cell | 5.75e-20 | 6 |
gut absorptive cell | 5.75e-20 | 6 |
enterocyte | 5.75e-20 | 6 |
endodermal cell | 7.36e-19 | 20 |
intestinal epithelial cell | 2.03e-17 | 9 |
epithelial cell of alimentary canal | 2.03e-17 | 9 |
columnar/cuboidal epithelial cell | 4.88e-17 | 7 |
duct epithelial cell | 6.51e-12 | 3 |
epithelial cell of tracheobronchial tree | 6.51e-12 | 3 |
branched duct epithelial cell | 6.51e-12 | 3 |
epithelial cell of lower respiratory tract | 6.51e-12 | 3 |
respiratory epithelial cell | 6.51e-12 | 3 |
tracheal epithelial cell | 6.51e-12 | 3 |
tracheoblast | 6.51e-12 | 3 |
extraembryonic cell | 1.34e-11 | 3 |
trophoblast cell | 1.34e-11 | 3 |
M cell of gut | 1.73e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.78e-30 | 15 |
intestinal mucosa | 1.21e-23 | 13 |
wall of intestine | 1.21e-23 | 13 |
gastrointestinal system mucosa | 1.21e-23 | 13 |
organ component layer | 8.39e-18 | 24 |
epithelium of mucosa | 2.03e-17 | 9 |
gastrointestinal system epithelium | 2.03e-17 | 9 |
intestinal epithelium | 2.03e-17 | 9 |
simple columnar epithelium | 4.27e-14 | 11 |
trachea | 6.51e-12 | 3 |
respiratory airway | 6.51e-12 | 3 |
tracheobronchial tree | 6.51e-12 | 3 |
lower respiratory tract | 6.51e-12 | 3 |
blastocyst | 1.34e-11 | 3 |
blastula | 1.34e-11 | 3 |
cleaving embryo | 1.34e-11 | 3 |
intestine | 8.35e-11 | 31 |
ileal mucosa | 3.92e-10 | 3 |
ileum | 3.92e-10 | 3 |
mucosa of small intestine | 3.92e-10 | 3 |
wall of small intestine | 3.92e-10 | 3 |
gut-associated lymphoid tissue | 4.17e-08 | 2 |
mucosa-associated lymphoid tissue | 4.17e-08 | 2 |
lymphoid tissue | 4.17e-08 | 2 |
small intestine | 1.03e-07 | 4 |