FFCP PHASE1:Mm9::chr16:96720848..96720858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:96720848..96720858,+ | |||
|description=CAGE_peak_at_chr16:96720848..96720858,+ | |description=CAGE_peak_at_chr16:96720848..96720858,+ | ||
|id=chr16:96720848..96720858,+ | |id=chr16:96720848..96720858,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.66e-20!52;UBERON:0005068!9.66e-20!52;UBERON:0006241!9.66e-20!52;UBERON:0007135!9.66e-20!52;UBERON:0002616!1.02e-18!49;UBERON:0001017!1.45e-18!73;UBERON:0005743!1.45e-18!73;UBERON:0000955!2.79e-18!50;UBERON:0006238!2.79e-18!50;UBERON:0000073!5.74e-18!75;UBERON:0001016!5.74e-18!75;UBERON:0002298!1.11e-15!6;UBERON:0000033!1.17e-15!63;UBERON:0002346!1.53e-13!71;UBERON:0003075!1.53e-13!71;UBERON:0007284!1.53e-13!71;UBERON:0004121!3.40e-12!102;UBERON:0000924!3.40e-12!102;UBERON:0006601!3.40e-12!102;UBERON:0007811!6.46e-12!86;UBERON:0003080!3.79e-11!40;UBERON:0000153!1.36e-10!94;UBERON:0003076!1.39e-10!12;UBERON:0003057!1.39e-10!12;UBERON:0002780!1.85e-09!39;UBERON:0001890!1.85e-09!39;UBERON:0006240!1.85e-09!39;UBERON:0002950!6.00e-09!4;UBERON:0001891!6.00e-09!4;UBERON:0009616!6.00e-09!4;UBERON:0002020!6.68e-09!34;UBERON:0001896!9.86e-09!2;UBERON:0005290!9.86e-09!2;UBERON:0010096!9.86e-09!2;UBERON:0003056!1.08e-08!49;UBERON:0004111!2.31e-07!122;UBERON:0000025!4.00e-07!114;UBERON:0002791!6.41e-07!29;UBERON:0003528!6.41e-07!29;UBERON:0001893!6.41e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.80e-25,2;UBERON:0002298,1.80e-25,2;UBERON:0005290,1.80e-25,2;UBERON:0010096,1.80e-25,2;UBERON:0002259,3.62e-14,1;UBERON:0002314,3.62e-14,1;UBERON:0004061,3.62e-14,1;UBERON:0006777,3.62e-14,1;UBERON:0005882,3.62e-14,1;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0003076,4.79e-10,12;UBERON:0003057,4.79e-10,12;UBERON:0002616,5.79e-10,46;UBERON:0000955,9.35e-10,47;UBERON:0006238,9.35e-10,47;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0004733,3.47e-09,6;UBERON:0004732,3.47e-09,6;UBERON:0002028,3.47e-09,6;UBERON:0007277,3.47e-09,6;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0000073,1.65e-08,54;UBERON:0001016,2.47e-08,75;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,3.14560342750128,1.83000241127451,0,0.347648640384553,0,2.28566849015516,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,3.14560342750128,1.83000241127451,0,0.347648640384553,0,2.28566849015516,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:96720848..96720858,+ | |short_description=p@chr16:96720848..96720858,+ | ||
}} | }} |
Latest revision as of 06:44, 4 August 2015
Short description: | p@chr16:96720848..96720858, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:96720848..96720858, + |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.80e-25 | 2 |
brainstem | 1.80e-25 | 2 |
myelencephalon | 1.80e-25 | 2 |
future myelencephalon | 1.80e-25 | 2 |
corpora quadrigemina | 3.62e-14 | 1 |
midbrain tectum | 3.62e-14 | 1 |
neural tube mantle layer | 3.62e-14 | 1 |
tectal plate | 3.62e-14 | 1 |
neural tube alar plate | 3.62e-14 | 1 |
neural tube | 5.81e-12 | 52 |
neural rod | 5.81e-12 | 52 |
future spinal cord | 5.81e-12 | 52 |
neural keel | 5.81e-12 | 52 |
posterior neural tube | 4.79e-10 | 12 |
chordal neural plate | 4.79e-10 | 12 |
regional part of brain | 5.79e-10 | 46 |
brain | 9.35e-10 | 47 |
future brain | 9.35e-10 | 47 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
segmental subdivision of hindbrain | 3.47e-09 | 6 |
segmental subdivision of nervous system | 3.47e-09 | 6 |
hindbrain | 3.47e-09 | 6 |
presumptive hindbrain | 3.47e-09 | 6 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
regional part of nervous system | 1.65e-08 | 54 |
nervous system | 2.47e-08 | 75 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |