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FFCP PHASE1:Mm9::chr5:35104383..35104429,+: Difference between revisions

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{{FFCP|EntrezGene=15194|HGNC=|MCL_coexpression_id=1|UniProt=G3X9H5,P42859|association_with_transcript=0bp_to_ENSMUST00000080036,ENSMUST00000123755,ENSMUST00000148953,NM_010414,uc008xda.1,uc008xdb.1,uc008xdc.2_5end|description=CAGE_peak_1_at_Htt_5end|id=chr5:35104383..35104429,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.47e-10!94;UBERON:0007811!2.50e-10!86;UBERON:0000955!3.07e-08!50;UBERON:0006238!3.07e-08!50;UBERON:0000033!4.37e-08!63;UBERON:0002616!9.99e-08!49;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0002021!2.48e-07!10;UBERON:0000411!2.48e-07!10;UBERON:0001950!2.48e-07!10;UBERON:0004121!3.29e-07!102;UBERON:0000924!3.29e-07!102;UBERON:0006601!3.29e-07!102;UBERON:0002020!9.47e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.93e-09,54;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95;UBERON:0001049,1.11e-07,52;UBERON:0005068,1.11e-07,52;UBERON:0006241,1.11e-07,52;UBERON:0007135,1.11e-07,52;UBERON:0010371,1.25e-07,73;UBERON:0002346,1.28e-07,64;UBERON:0003075,1.28e-07,64;UBERON:0007284,1.28e-07,64;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10;UBERON:0000955,8.64e-07,47;UBERON:0006238,8.64e-07,47;UBERON:0002020,9.47e-07,34|phase1_expression=17.7765220286321,18.1467211972468,16.3799726180233,25.4069937497737,20.5367249278002,17.1236857350128,19.3898491694286,27.8906378633805,24.6380263765417,21.0658073689794,28.0797467889828,31.1909141671765,29.4465255481674,33.394593724057,24.9832321361747,27.7391116324062,30.0811607595103,26.498821890092,27.6971155883592,29.2828859740641,41.9263420444774,22.3404640201992,18.0227854505865,14.8792953197868,12.6175104586944,20.0981187440257,14.2151458732495,11.8509177977239,12.9215925230334,22.4306815486338,12.8603696180077,31.1165029995219,41.8244055557508,0,16.7533939455739,14.2961795008303,18.1710727073509,15.9042019680025,10.1573594788094,17.2762835511353,13.5293242247133,10.2456822743767,13.1087795318411,22.1578399637016,20.0726323814639,24.228171285342,12.5182615095686,12.8634842264463,11.4236815021925,17.4986909166855,14.5585878490377,8.62515386189829,23.8251300601986,41.3456420946466,41.6756310936655,12.3484529297255,14.0401385569991,17.0171790451556,33.5845325026932,20.1016572123373,22.1840991227163,15.9256930072492,10.6715375533337,18.4479442042687,22.7439263390404,25.5772841380596,17.9760066311043,19.2109152660777,27.788816098672,20.2508907497536,23.5563956713548,27.7081454871689,27.3876990780001,21.190908264187,20.1275489138296,23.8996884518605,74.8787990795843,69.2065372421717,60.9817937027287,34.5542073853108,23.6038120494217,34.3802824567462,48.5778418262403,48.3975844627245,54.2433779607676,36.5339445987348,32.7454865837937,31.6879057903011,29.1545844332759,32.5713424060246,29.2763133588695,12.9063581547208,18.3592260101093,18.8896117073236,25.3412802804591,22.8493712419641,18.5386634573912,11.0779709675738,10.1316541795119,10.9535268098205,20.4222958676187,24.3820307087204,28.028576367731,21.3320010945999,11.2575341325831,10.6411143499541,11.62706223534,20.6672822291499,63.6987193772042,35.6261133755579,22.5530924795977,21.3125834818499,22.1390877365816,21.4026149584724,22.4594430629196,19.9809880214184,59.0795972885154,29.7874675255018,40.6920853896942,26.0444628415329,25.3967746229453,22.7891368973554,18.6391761218122,74.9518840349561,82.7314491913148,24.0129631896076,21.9261677845834,12.5979573508616,15.629637929987,65.907881338122,57.6450759551469,28.3978835775074,66.7485389538342,67.5088807352073,54.4404676746047,58.244613441325,21.0807483170155,24.6325801807984,28.0522261861379,33.0393713741764,24.7228841629137,20.6911893990126,25.2086981727489,25.4691142142358,34.2903955722692,34.8469319174791,31.2026742783897,40.6164292060255,19.8322553498215,29.5005485061798,24.8091085071168,19.5084201860542,27.2486304241086,27.8601733217733,27.1632420058485,24.4812148186747,11.937624184325,10.5512641917033,18.7547909601091,23.1980865239762,18.9966108584688,16.2055855314913,25.5684314432027,19.479658942993,19.591923336697,18.3701816352822,21.4618721119695,14.8291984806305,22.5446994381468,18.0584210487005,20.7536152437391,16.0819986167866,20.1986106067767,17.1784216013276,63.9281443634947,25.5203438700625,27.755177770639,30.4118151663076,24.1015723104814,30.6552406855779,28.3508414908605,26.0171746764112,24.016828735246,25.6804595251955,20.8792787079585,22.3990578424655,22.6201687920243,21.8852119245266,24.5654749770091,33.2563181202062,20.533114738096,21.706398784726,24.8464950248537,25.1346727741403,36.0664754153857,28.511185898344,29.6747305366467,27.2828339373339,25.4843244610757,25.3889454524916,25.4337939103027,23.6922554729857,15.4155366085317,37.206458574689,37.1496500763954,34.6287653072675,30.8347384510524,42.2060029566729,27.2449661406119,25.6049562331221,23.9960135627052,20.8666674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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:15194
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:G3X9H5,uniprot:P42859
|association_with_transcript=0bp_to_ENSMUST00000080036,ENSMUST00000123755,ENSMUST00000148953,NM_010414,uc008xda.1,uc008xdb.1,uc008xdc.2_5end
|cluster_id=chr5:35104383..35104429,+
|description=CAGE_peak_1_at_Htt_5end
|id=chr5:35104383..35104429,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!2.47e-10!94;UBERON:0007811!2.50e-10!86;UBERON:0000955!3.07e-08!50;UBERON:0006238!3.07e-08!50;UBERON:0000033!4.37e-08!63;UBERON:0002616!9.99e-08!49;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0002021!2.48e-07!10;UBERON:0000411!2.48e-07!10;UBERON:0001950!2.48e-07!10;UBERON:0004121!3.29e-07!102;UBERON:0000924!3.29e-07!102;UBERON:0006601!3.29e-07!102;UBERON:0002020!9.47e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.93e-09,54;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95;UBERON:0001049,1.11e-07,52;UBERON:0005068,1.11e-07,52;UBERON:0006241,1.11e-07,52;UBERON:0007135,1.11e-07,52;UBERON:0010371,1.25e-07,73;UBERON:0002346,1.28e-07,64;UBERON:0003075,1.28e-07,64;UBERON:0007284,1.28e-07,64;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10;UBERON:0000955,8.64e-07,47;UBERON:0006238,8.64e-07,47;UBERON:0002020,9.47e-07,34
|phase1_expression=17.7765220286321,18.1467211972468,16.3799726180233,25.4069937497737,20.5367249278002,17.1236857350128,19.3898491694286,27.8906378633805,24.6380263765417,21.0658073689794,28.0797467889828,31.1909141671765,29.4465255481674,33.394593724057,24.9832321361747,27.7391116324062,30.0811607595103,26.498821890092,27.6971155883592,29.2828859740641,41.9263420444774,22.3404640201992,18.0227854505865,14.8792953197868,12.6175104586944,20.0981187440257,14.2151458732495,11.8509177977239,12.9215925230334,22.4306815486338,12.8603696180077,31.1165029995219,41.8244055557508,0,16.7533939455739,14.2961795008303,18.1710727073509,15.9042019680025,10.1573594788094,17.2762835511353,13.5293242247133,10.2456822743767,13.1087795318411,22.1578399637016,20.0726323814639,24.228171285342,12.5182615095686,12.8634842264463,11.4236815021925,17.4986909166855,14.5585878490377,8.62515386189829,23.8251300601986,41.3456420946466,41.6756310936655,12.3484529297255,14.0401385569991,17.0171790451556,33.5845325026932,20.1016572123373,22.1840991227163,15.9256930072492,10.6715375533337,18.4479442042687,22.7439263390404,25.5772841380596,17.9760066311043,19.2109152660777,27.788816098672,20.2508907497536,23.5563956713548,27.7081454871689,27.3876990780001,21.190908264187,20.1275489138296,23.8996884518605,74.8787990795843,69.2065372421717,60.9817937027287,34.5542073853108,23.6038120494217,34.3802824567462,48.5778418262403,48.3975844627245,54.2433779607676,36.5339445987348,32.7454865837937,31.6879057903011,29.1545844332759,32.5713424060246,29.2763133588695,12.9063581547208,18.3592260101093,18.8896117073236,25.3412802804591,22.8493712419641,18.5386634573912,11.0779709675738,10.1316541795119,10.9535268098205,20.4222958676187,24.3820307087204,28.028576367731,21.3320010945999,11.2575341325831,10.6411143499541,11.62706223534,20.6672822291499,63.6987193772042,35.6261133755579,22.5530924795977,21.3125834818499,22.1390877365816,21.4026149584724,22.4594430629196,19.9809880214184,59.0795972885154,29.7874675255018,40.6920853896942,26.0444628415329,25.3967746229453,22.7891368973554,18.6391761218122,74.9518840349561,82.7314491913148,24.0129631896076,21.9261677845834,12.5979573508616,15.629637929987,65.907881338122,57.6450759551469,28.3978835775074,66.7485389538342,67.5088807352073,54.4404676746047,58.244613441325,21.0807483170155,24.6325801807984,28.0522261861379,33.0393713741764,24.7228841629137,20.6911893990126,25.2086981727489,25.4691142142358,34.2903955722692,34.8469319174791,31.2026742783897,40.6164292060255,19.8322553498215,29.5005485061798,24.8091085071168,19.5084201860542,27.2486304241086,27.8601733217733,27.1632420058485,24.4812148186747,11.937624184325,10.5512641917033,18.7547909601091,23.1980865239762,18.9966108584688,16.2055855314913,25.5684314432027,19.479658942993,19.591923336697,18.3701816352822,21.4618721119695,14.8291984806305,22.5446994381468,18.0584210487005,20.7536152437391,16.0819986167866,20.1986106067767,17.1784216013276,63.9281443634947,25.5203438700625,27.755177770639,30.4118151663076,24.1015723104814,30.6552406855779,28.3508414908605,26.0171746764112,24.016828735246,25.6804595251955,20.8792787079585,22.3990578424655,22.6201687920243,21.8852119245266,24.5654749770091,33.2563181202062,20.533114738096,21.706398784726,24.8464950248537,25.1346727741403,36.0664754153857,28.511185898344,29.6747305366467,27.2828339373339,25.4843244610757,25.3889454524916,25.4337939103027,23.6922554729857,15.4155366085317,37.206458574689,37.1496500763954,34.6287653072675,30.8347384510524,42.2060029566729,27.2449661406119,25.6049562331221,23.9960135627052,20.8666674022942,20.1275489138296,19.7234702264307,21.8426371180192,20.4588891137161,24.2186508254581,13.9908621195376,29.1910040463235,21.9810037653762,26.2373612071662,25.1222726947278,28.1628297946203,27.6385324778996,24.2804513703734,24.9771069257982,26.4827042098401,29.8977331025846,31.412589425525,23.760180633782,28.6657069897387,21.8420078458082,30.1582567878545,26.6513785071168,28.0305635620851,22.9027499432928,54.9083017758249,45.9469811441436,7.86887737808042,14.895784705058,21.4545589203055,18.350620981942,24.1274205460735,27.720380562496,31.6374117197,36.5168724717594,23.4790206971439,24.2572362066389,21.7408277870588,75.1891880427029,35.910841557692,21.1898068364034,28.0165570088151,36.2934270539578,26.5490276679926,17.4802058031587,19.0463840887793,16.9744571780308,18.3087173586079,23.9799415396263,21.9664049192988,19.9943551212628,21.746340081468,19.9103157499564,14.7586052004998,15.470331487228,43.5762695364849,23.5880033181016,20.8267480890235,21.8623775732224,29.793159251902,20.155676389034,22.8723138636948,22.2259412853657,22.9978273902436,27.7500012831604,19.4064990288366,38.4184969353648,28.5792035251753,29.2517685901556,26.1425433366869,32.171616350032,23.9014286036478,49.8794062408271,38.4459481795169,25.5919716274396,30.9274860707418,33.3412168898303,38.9578549004922,32.0289442489132,27.3665272290107,19.4532518729885,25.0141952586007,11.4560474161814,22.1435195506795,33.7510315430569,24.7332230481925,25.2996838177507,19.8709933009022,24.1407180028829,24.1348090717981,25.3903263724509,22.9418502726473,27.3389297758247,53.5508291749981,26.7634617418722,18.8622679121091,25.2786544847262,17.307416346016,22.4711646902735,21.3590174335272,29.9470085141085,40.265988259473,41.794052902899,41.4763209011326,35.7092566309841,24.9352014806902,20.6449023901303,25.2046396576922,36.1633925248313,30.3982472815335,31.2508168751919,29.8332844892646,30.794767234185,34.9027174479899,27.7272009126311,33.1356794515158,28.9597643337392,32.6086557086577,24.2601510468276,24.4184548711471,16.0587803330961,19.4746154982331,30.7171454511183,30.967608449445,33.5167472409095,27.2247841430414,25.5801773058035,48.0039066224507,52.016751725311,53.2792827498639,53.9618992559179,56.1767666211927,67.985450765073,60.0770025206307,59.4423988255971,61.6273676218518,67.8266008394884,16.9173376562208,40.3015122135041,26.6344424976449,33.5487269554246,21.7997689133102,27.5765262675021,20.4466989577486,27.196627555534,25.3526175577534,34.6195180116403,26.8688057883654,28.4825775492975,26.6878296289165,29.0033940394058,27.7413315055612,23.3383908728706,25.9580890116476,28.7434738490921,26.3734976514116,22.963031540966,26.7438016860624,23.9592338315106,30.0429599333624,24.5635444108635,26.7270640379539,28.515122859495,26.524556066552,30.5160865267898,27.1608227691724,17.9565526930476,31.7941848572787,24.133598182013,27.4184798923692,28.5083787782177,33.3728436997375,28.7282164628638,30.6450407063485,35.0239818098726,25.4413481651562,21.6179590737125,22.2593122195605
|short_description=p1@Htt
}}

Revision as of 08:38, 4 August 2015

Short description:p1@Htt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Htt_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000080036, ENSMUST00000123755, ENSMUST00000148953, NM_010414, uc008xda.1, uc008xdb.1, uc008xdc.2_5end
EntrezGene:15194
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Htt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I325.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I420.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.39
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.89
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E724.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E628.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F131.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E429.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E833.39
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A327.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.08
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A226.50
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A341.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.02
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H920.10
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I211.85
Ileum epithelium, pool1.CNhs13199.10252-104B912.92
Ileum epithelium, pool2.CNhs13232.10253-104C122.43
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I331.12
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G641.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H317.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.07
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.23
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.86
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.83
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I941.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.04
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C333.58
Mouse Granule cells, donor2.CNhs12357.11731-123E320.10
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.93
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D225.58
Mouse Microglia, donor1.CNhs12629.11718-123C817.98
Mouse Microglia, donor2.CNhs12634.11736-123E819.21
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.79
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.25
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D374.88
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F369.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D760.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E448.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I654.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D636.53
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.75
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.69
Mouse Schwann, donor1.CNhs12507.11728-123D929.15
Mouse Schwann, donor2.CNhs12573.11746-123F932.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F425.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.85
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.26
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.67
accessory axillary lymph node, adult.CNhs10475.1063-29H963.70
adrenal gland, adult.CNhs10508.49-24D735.63
adrenal gland, embryo E14.CNhs11038.406-44C522.55
adrenal gland, embryo E16.CNhs11004.1254-43D621.31
adrenal gland, embryo E17.CNhs11043.1263-45I122.14
adrenal gland, embryo E18.CNhs11026.1262-18F521.40
adrenal gland, neonate N00.CNhs11191.1311-23C122.46
adrenal gland, neonate N25.CNhs11223.1377-27I319.98
amnion, adult pregnant day17.5.CNhs10488.583-22A859.08
aorta, adult.CNhs10498.46-23H129.79
bone (os femoris), adult.CNhs10483.56-12G240.69
bone (os femoris), neonate N02.CNhs11227.1985-43F526.04
bone (os femoris), neonate N16.CNhs11225.1525-43A625.40
bone (os femoris), neonate N20.CNhs11195.1350-25C322.79
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B274.95
cerebellum, neonate N30.CNhs11135.1395-42I282.73
colon, adult.CNhs10468.36-18H724.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.93
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.63
corpora quadrigemina, adult.CNhs10501.16-22A465.91
corpus striatum, adult.CNhs10487.19-21D857.65
corpus striatum, neonate N00.CNhs11226.630-43F128.40
cortex, adult.CNhs10473.12-14D566.75
cortex, neonate N30.CNhs11107.1392-42F267.51
diencephalon, adult.CNhs10482.20-12F254.44
diencephalon, neonate N30.CNhs11201.1388-42B258.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.08
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.63
epididymis, adult.CNhs10490.58-23B228.05
eyeball, adult.CNhs10484.31-12G433.04
eyeball, embryo E12.CNhs11016.345-16C624.72
eyeball, embryo E14.CNhs10521.399-16E220.69
eyeball, embryo E15.CNhs10593.426-16C925.21
eyeball, embryo E17.CNhs11023.1261-18D425.47
eyeball, neonate N00.CNhs11207.633-15C634.29
eyeball, neonate N01.CNhs11140.1532-43E734.85
eyeball, neonate N02.CNhs11205.1551-44G831.20
eyeball, neonate N16.CNhs11188.777-19A240.62
forelimb, embryo E11.CNhs10596.335-25E219.83
forelimb, embryo E12.CNhs10600.359-14H229.50
forelimb, embryo E13.CNhs10589.384-1E224.81
forelimb, embryo E14.CNhs10577.413-26A819.51
forelimb, embryo E15.CNhs11007.437-20E727.25
forelimb, embryo E17.CNhs10598.1517-43C427.86
forelimb, embryo E18.CNhs11008.1520-43B527.16
gonad, embryo E13.CNhs11044.1564-45I624.48
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.55
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.75
heart, embryo E11.CNhs10586.331-24E923.20
heart, embryo E12.CNhs11015.353-12F519.00
heart, embryo E13.CNhs11013.376-3I916.21
heart, embryo E14.CNhs10597.403-26D425.57
heart, embryo E15.CNhs11017.431-16C819.48
heart, embryo E16.CNhs11021.457-17C619.59
heart, embryo E17.CNhs11025.479-18E518.37
heart, embryo E18.CNhs11030.1283-20G321.46
heart, neonate N00.CNhs11213.639-21E314.83
heart, neonate N03.CNhs11221.1349-25I222.54
heart, neonate N10.CNhs11118.749-24G118.06
heart, neonate N16.CNhs11209.782-15G120.75
heart, neonate N20.CNhs11127.821-26I616.08
heart, neonate N25.CNhs11196.1351-25D320.20
heart, neonate N30.CNhs11202.1390-42D217.18
hippocampus, adult.CNhs10478.13-16E863.93
hippocampus, neonate N00.CNhs11228.627-43G125.52
intestinal mucosa, adult.CNhs10506.860-29I327.76
intestine, adult.CNhs10496.178-9A330.41
intestine, embryo E12.CNhs11019.1251-16I524.10
intestine, embryo E13.CNhs11010.381-16D530.66
intestine, embryo E15.CNhs10602.976-16D828.35
intestine, embryo E16.CNhs10585.463-22H426.02
intestine, embryo E17.CNhs10582.482-18D324.02
intestine, embryo E18.CNhs10526.1289-20F725.68
intestine, neonate N00.CNhs11126.644-26D120.88
intestine, neonate N01.CNhs11192.1322-23E922.40
intestine, neonate N06.CNhs11102.688-20B822.62
intestine, neonate N07.CNhs11095.720-20F221.89
intestine, neonate N10.CNhs11098.755-23A524.57
intestine, neonate N20.CNhs11187.827-18D133.26
intestine, neonate N25.CNhs11121.1352-25E320.53
intestine, neonate N30.CNhs11131.1384-42G121.71
kidney, embryo E14.CNhs10606.411-4I924.85
kidney, embryo E15.CNhs10997.434-16F825.13
kidney, embryo E16.CNhs10584.464-22A536.07
kidney, embryo E17.CNhs11028.483-18I228.51
kidney, embryo E18.CNhs11001.1288-20C729.67
kidney, neonate N00.CNhs11214.646-21G727.28
kidney, neonate N10.CNhs11206.758-6D525.48
kidney, neonate N20.CNhs11113.832-19I125.39
kidney, neonate N25.CNhs11122.1353-25F325.43
kidney, neonate N30.CNhs11203.1385-42H123.69
liver, adult pregnant day01.CNhs10466.508-5B215.42
liver, embryo E12.CNhs10601.355-15F837.21
liver, embryo E13.CNhs10524.378-3H637.15
liver, embryo E14.CNhs10594.409-16E134.63
liver, embryo E15.CNhs10520.433-16D730.83
liver, embryo E16.CNhs10523.462-17F542.21
liver, embryo E17.CNhs10510.481-18A327.24
liver, embryo E18.CNhs10579.499-43G425.60
liver, neonate N00.CNhs11117.641-24F424.00
liver, neonate N03.CNhs11123.1345-25G220.87
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H219.72
liver, neonate N10.CNhs11115.751-24B921.84
liver, neonate N20.CNhs11220.823-25A320.46
liver, neonate N25.CNhs11198.1368-26H124.22
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B129.19
lung, embryo E12.CNhs10522.354-16G221.98
lung, embryo E14.CNhs10604.404-26F826.24
lung, embryo E15.CNhs11020.432-17C525.12
lung, embryo E16.CNhs10998.458-17B628.16
lung, embryo E17.CNhs10605.480-44A627.64
lung, embryo E18.CNhs10583.1287-20I624.28
lung, neonate N00.CNhs11224.640-42C624.98
lung, neonate N06.CNhs11212.683-20E526.48
lung, neonate N07.CNhs11111.715-19A329.90
lung, neonate N10.CNhs11219.750-23E631.41
lung, neonate N20.CNhs11109.822-18A423.76
lung, neonate N25.CNhs11119.1359-25C728.67
lung, neonate N30.CNhs11133.1394-42H221.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A126.65
mammary gland, adult lactating day02.CNhs10480.595-22B628.03
mammary gland, adult pregnant day19.CNhs10476.588-5H222.90
medulla oblongata, adult.CNhs10477.17-12C254.91
medulla oblongata, neonate N30.CNhs11200.1396-42A345.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.90
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.13
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D727.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D831.64
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D936.52
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D621.74
olfactory brain, adult.CNhs10489.18-22I975.19
ovary, adult.CNhs10507.91-2I735.91
ovary, embryo E18.CNhs11040.505-44H721.19
ovary, neonate N00.CNhs11217.1299-22I428.02
oviduct, adult pregnant day01.CNhs10500.988-6G636.29
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F417.48
pancreas, embryo E15.CNhs11042.1556-45F219.05
pancreas, embryo E16.CNhs11003.460-26E516.97
pancreas, embryo E17.CNhs10599.1558-45G318.31
pancreas, embryo E18.CNhs10580.1535-43I723.98
pancreas, neonate N00.CNhs11105.645-26G921.97
pancreas, neonate N01.CNhs11138.1531-43D719.99
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B619.91
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G843.58
pituitary gland, embryo E12.CNhs11018.346-16E623.59
pituitary gland, embryo E13.CNhs11009.370-44C720.83
pituitary gland, embryo E14.CNhs11037.398-44A521.86
pituitary gland, embryo E15.CNhs10592.427-16B929.79
pituitary gland, embryo E16.CNhs11036.449-43F620.16
pituitary gland, embryo E17.CNhs11039.1265-44F522.87
pituitary gland, neonate N00.CNhs11190.1308-22E922.23
placenta, adult pregnant day10.CNhs10472.539-13I723.00
placenta, adult pregnant day17.CNhs10464.577-18G327.75
prostate, adult.CNhs10470.859-1F819.41
skin, adult.CNhs10492.30-1C338.42
skin, neonate N00.CNhs11124.650-25G428.58
skin, neonate N03.CNhs11215.662-22H329.25
skin, neonate N06.CNhs11097.693-20I526.14
skin, neonate N10.CNhs11108.762-6C432.17
small intestine, neonate N16.CNhs11114.790-21I123.90
spinal cord, adult.CNhs10505.24-13C949.88
spleen, adult.CNhs10465.25-2G238.45
spleen, embryo E16.CNhs11035.461-43C125.59
spleen, embryo E18.CNhs11011.1271-21F230.93
spleen, neonate N10.CNhs11116.752-24D133.34
spleen, neonate N20.CNhs11112.824-19H138.96
spleen, neonate N25.CNhs11099.1354-25G332.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.01
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E322.14
stomach, embryo E15.CNhs10603.1252-16G833.75
stomach, embryo E16.CNhs11022.459-17D424.73
stomach, embryo E17.CNhs11006.1035-18D525.30
stomach, embryo E18.CNhs10999.1286-20C619.87
stomach, neonate N03.CNhs11193.1340-24B824.14
stomach, neonate N07.CNhs11210.718-18A924.13
stomach, neonate N25.CNhs11104.1355-25E425.39
stomach, neonate N30.CNhs11134.1386-42I122.94
submandibular gland, adult.CNhs10469.59-29C127.34
testis, adult.CNhs10504.57-7G553.55
testis, embryo E13.CNhs11031.389-23F526.76
testis, embryo E15.CNhs11034.443-27C518.86
testis, embryo E16.CNhs11033.470-26G525.28
testis, embryo E17.CNhs11029.486-18I517.31
testis, embryo E18.CNhs11027.503-18G522.47
testis, neonate N00.CNhs11189.1300-22B721.36
testis, neonate N07.CNhs11222.726-26I429.95
testis, neonate N10.CNhs11204.763-44D940.27
testis, neonate N20.CNhs11110.839-18H341.79
testis, neonate N30.CNhs11130.1391-42E241.48
thymus, adult.CNhs10471.38-12B535.71
thymus, embryo E14.CNhs11041.402-44I424.94
thymus, embryo E15.CNhs11005.430-45I220.64
thymus, embryo E16.CNhs11002.456-26C525.20
thymus, embryo E17.CNhs10581.478-18C136.16
thymus, embryo E18.CNhs10595.1273-19G430.40
thymus, neonate N02.CNhs11181.1541-43F831.25
thymus, neonate N03.CNhs11137.2104-43C729.83
thymus, neonate N06.CNhs11197.681-26C430.79
thymus, neonate N07.CNhs11211.713-19D334.90
thymus, neonate N10.CNhs11194.748-24E427.73
thymus, neonate N20.CNhs11186.820-7A233.14
thymus, neonate N25.CNhs11125.1362-25G728.96
thymus, neonate N30.CNhs11132.1393-42G232.61
tongue, adult.CNhs10499.32-1B424.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H324.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G519.47
urinary bladder, adult.CNhs10481.879-12E430.72
uterus, adult pregnant day19.CNhs10497.590-15F530.97
uterus, adult.CNhs10509.92-27E533.52
vagina, adult.CNhs10502.89-27D527.22
vesicular gland, adult.CNhs10491.51-27F825.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A148.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A252.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D753.96
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A456.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A660.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A759.44
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A861.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A967.83
whole body, embryo E11.CNhs11014.324-5I816.92
whole body, embryo E12.CNhs10587.857-27C940.30
whole body, embryo E13.CNhs10512.372-23H226.63
whole body, embryo E14.5.CNhs10578.420-27D233.55
whole body, embryo E14.CNhs10519.395-14B121.80
whole body, embryo E16.CNhs10514.453-14F227.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G534.62
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.48
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G529.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G523.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G525.96
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G528.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G524.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G526.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G528.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G531.79
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.51
whole body, embryo E17.5.CNhs10513.490-9F933.37
whole body, embryo E17.CNhs10517.475-3I528.73
whole body, embryo E18.CNhs10516.493-3B330.65
whole body, neonate N00.CNhs10525.657-19C235.02
whole body, neonate N01.CNhs10576.659-23C625.44
whole body, neonate N06.CNhs10515.692-21D121.62
whole body, neonate N10.CNhs10518.761-6B422.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.93e-0954
ectoderm-derived structure3.18e-0895
ectoderm3.18e-0895
presumptive ectoderm3.18e-0895
neural tube1.11e-0752
neural rod1.11e-0752
future spinal cord1.11e-0752
neural keel1.11e-0752
ecto-epithelium1.25e-0773
neurectoderm1.28e-0764
neural plate1.28e-0764
presumptive neural plate1.28e-0764
occipital lobe2.48e-0710
visual cortex2.48e-0710
neocortex2.48e-0710
brain8.64e-0747
future brain8.64e-0747
gray matter9.47e-0734
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