FFCP PHASE1:Mm9::chr5:35621834..35621867,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:35621834..35621867,+ | |||
|description=CAGE_peak_at_chr5:35621834..35621867,+ | |description=CAGE_peak_at_chr5:35621834..35621867,+ | ||
|id=chr5:35621834..35621867,+ | |id=chr5:35621834..35621867,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.70e-08!44;CL:0000133!3.70e-08!44;CL:0002319!1.45e-07!43 | |ontology_enrichment_celltype=CL:0000221!3.70e-08!44;CL:0000133!3.70e-08!44;CL:0002319!1.45e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,6.49e-11,6;CL:0000126,6.49e-11,6;CL:0000127,6.49e-11,6;CL:0002605,4.80e-09,2;CL:0002604,4.80e-09,2;CL:0002603,6.26e-09,2;CL:0002453,3.37e-08,8;CL:0000221,3.08e-07,44;CL:0000133,3.08e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.92e-21!71;UBERON:0003075!1.92e-21!71;UBERON:0007284!1.92e-21!71;UBERON:0004121!2.37e-19!102;UBERON:0000924!2.37e-19!102;UBERON:0006601!2.37e-19!102;UBERON:0000033!6.41e-16!63;UBERON:0007811!3.05e-12!86;UBERON:0000073!8.30e-12!75;UBERON:0001016!8.30e-12!75;UBERON:0001017!2.13e-11!73;UBERON:0005743!2.13e-11!73;UBERON:0003056!2.16e-11!49;UBERON:0001049!8.12e-11!52;UBERON:0005068!8.12e-11!52;UBERON:0006241!8.12e-11!52;UBERON:0007135!8.12e-11!52;UBERON:0000153!3.65e-10!94;UBERON:0000020!7.06e-10!12;UBERON:0001032!7.06e-10!12;UBERON:0004456!7.06e-10!12;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0005085!4.24e-09!13;UBERON:0002616!1.23e-08!49;UBERON:0000970!2.33e-08!9;UBERON:0000019!2.33e-08!9;UBERON:0000047!2.33e-08!9;UBERON:0004088!2.33e-08!9;UBERON:0002104!2.33e-08!9;UBERON:0001456!2.33e-08!9;UBERON:0003072!2.33e-08!9;UBERON:0003071!2.33e-08!9;UBERON:0004128!2.33e-08!9;UBERON:0001444!2.79e-07!11;UBERON:0002020!3.24e-07!34;UBERON:0000489!3.61e-07!21 | |ontology_enrichment_uberon=UBERON:0002346!1.92e-21!71;UBERON:0003075!1.92e-21!71;UBERON:0007284!1.92e-21!71;UBERON:0004121!2.37e-19!102;UBERON:0000924!2.37e-19!102;UBERON:0006601!2.37e-19!102;UBERON:0000033!6.41e-16!63;UBERON:0007811!3.05e-12!86;UBERON:0000073!8.30e-12!75;UBERON:0001016!8.30e-12!75;UBERON:0001017!2.13e-11!73;UBERON:0005743!2.13e-11!73;UBERON:0003056!2.16e-11!49;UBERON:0001049!8.12e-11!52;UBERON:0005068!8.12e-11!52;UBERON:0006241!8.12e-11!52;UBERON:0007135!8.12e-11!52;UBERON:0000153!3.65e-10!94;UBERON:0000020!7.06e-10!12;UBERON:0001032!7.06e-10!12;UBERON:0004456!7.06e-10!12;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0005085!4.24e-09!13;UBERON:0002616!1.23e-08!49;UBERON:0000970!2.33e-08!9;UBERON:0000019!2.33e-08!9;UBERON:0000047!2.33e-08!9;UBERON:0004088!2.33e-08!9;UBERON:0002104!2.33e-08!9;UBERON:0001456!2.33e-08!9;UBERON:0003072!2.33e-08!9;UBERON:0003071!2.33e-08!9;UBERON:0004128!2.33e-08!9;UBERON:0001444!2.79e-07!11;UBERON:0002020!3.24e-07!34;UBERON:0000489!3.61e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.04e-24,9;UBERON:0000019,1.04e-24,9;UBERON:0000047,1.04e-24,9;UBERON:0010312,1.04e-24,9;UBERON:0004088,1.04e-24,9;UBERON:0002104,1.04e-24,9;UBERON:0001456,1.04e-24,9;UBERON:0003072,1.04e-24,9;UBERON:0004128,1.04e-24,9;UBERON:0003071,1.04e-24,9;UBERON:0000020,2.60e-23,12;UBERON:0001032,2.60e-23,12;UBERON:0004456,2.60e-23,12;UBERON:0000033,2.04e-21,13;UBERON:0005085,2.04e-21,13;UBERON:0001444,4.95e-20,11;UBERON:0002346,8.16e-16,64;UBERON:0003075,8.16e-16,64;UBERON:0007284,8.16e-16,64;UBERON:0010371,2.77e-15,73;UBERON:0010313,6.18e-13,3;UBERON:0002342,6.18e-13,3;UBERON:0002005,6.18e-13,3;UBERON:0005428,6.18e-13,3;UBERON:0005062,6.18e-13,3;UBERON:0010314,2.06e-11,92;UBERON:0004121,6.09e-11,95;UBERON:0000924,6.09e-11,95;UBERON:0006601,6.09e-11,95;UBERON:0003056,3.00e-10,49;UBERON:0007811,1.80e-08,36;UBERON:0000153,7.85e-07,43 | |||
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|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,3.2703773457067,5.27246838562732,3.11087838518853,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0.540023753326763,0.420649922702764,0.285650984403804,0.441737081903227,0.367472397644862,0.191690942036473,0.919218786610021,0,0.383062014255563,0.153606533256243,0,0,0,1.3959149950069,1.12552522006336,0.916789486660861,0.589257170947335,0.284743361598206,0.186399445825301,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,3.09855523508697,0,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0.585561594023094,0.209446706813455,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,0.251308704225729,0.695297280769106,0.255715457330331,1.0389402227978,0.324482526135515,0.101839363850316,0.870848794270651,4.0435641349388,2.10441855886474,1.04096354370163,0.919608417733892,1.0803727788321,1.65775299619287,1.56483948048054,1.66547836370305,2.52994656311268,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0.243206428637567,0.584799949701329,0.439100230582101,0.268412837520744,0.210289948564127,0.92614151141356,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0.569003702859245,0.342745537829186,2.25415471346161,0.407302655690628,0.193952487167626,0,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0.504941854408746,3.47059041357882,3.90438744296638,6.67812532971677,0,0,0.283076530788832,0,0.584511715822624,0,0.963963949265421,0.283880170416537,0,0,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0,0,0,0,0.356737635204141,0,0.608929898229199,0.23467170806371,0,0.220528398054962,0.65954501176592,0,0,0.119372344003136,0,0.874442509889552,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.308132871494482,0.389762468933385,1.07416017400489,0.39736270956253,0.360586348559907,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,2.50786052017682,0,0,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0.367687016900028,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.320125762024346,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0,0,0,0.154936841185966,0,0.749431733813838,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr5:35621834..35621867,+ | |short_description=p@chr5:35621834..35621867,+ | ||
}} | }} |
Latest revision as of 08:48, 4 August 2015
Short description: | p@chr5:35621834..35621867, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:35621834..35621867, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 6.49e-11 | 6 |
macroglial cell | 6.49e-11 | 6 |
astrocyte | 6.49e-11 | 6 |
astrocyte of the cerebral cortex | 4.80e-09 | 2 |
astrocyte of the hippocampus | 4.80e-09 | 2 |
astrocyte of the cerebellum | 6.26e-09 | 2 |
oligodendrocyte precursor cell | 3.37e-08 | 8 |
ectodermal cell | 3.08e-07 | 44 |
neurectodermal cell | 3.08e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
eye | 1.04e-24 | 9 |
camera-type eye | 1.04e-24 | 9 |
simple eye | 1.04e-24 | 9 |
immature eye | 1.04e-24 | 9 |
ocular region | 1.04e-24 | 9 |
visual system | 1.04e-24 | 9 |
face | 1.04e-24 | 9 |
optic cup | 1.04e-24 | 9 |
optic vesicle | 1.04e-24 | 9 |
eye primordium | 1.04e-24 | 9 |
sense organ | 2.60e-23 | 12 |
sensory system | 2.60e-23 | 12 |
entire sense organ system | 2.60e-23 | 12 |
head | 2.04e-21 | 13 |
ectodermal placode | 2.04e-21 | 13 |
subdivision of head | 4.95e-20 | 11 |
neurectoderm | 8.16e-16 | 64 |
neural plate | 8.16e-16 | 64 |
presumptive neural plate | 8.16e-16 | 64 |
ecto-epithelium | 2.77e-15 | 73 |
neural crest-derived structure | 6.18e-13 | 3 |
neural crest | 6.18e-13 | 3 |
enteric nervous system | 6.18e-13 | 3 |
vagal neural crest | 6.18e-13 | 3 |
neural fold | 6.18e-13 | 3 |
structure with developmental contribution from neural crest | 2.06e-11 | 92 |
ectoderm-derived structure | 6.09e-11 | 95 |
ectoderm | 6.09e-11 | 95 |
presumptive ectoderm | 6.09e-11 | 95 |
pre-chordal neural plate | 3.00e-10 | 49 |
craniocervical region | 1.80e-08 | 36 |
anterior region of body | 7.85e-07 | 43 |