FFCP PHASE1:Mm9::chr19:56900758..56900778,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=83561|HGNC=|MCL_coexpression_id=0|UniProt=Q99MV1|association_with_transcript=0bp_to_ENSMUST00000078723,ENSMUST00000121249,NM_001002240,NM_031387,uc008hzj.1,uc012bnt.1_5end|description=CAGE_peak_2_at_Tdrd1_5end|id=chr19:56900758..56900778,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004176!1.75e-32!17;UBERON:0009196!1.75e-32!17;UBERON:0009117!1.75e-32!17;UBERON:0000991!1.36e-30!18;UBERON:0005564!1.36e-30!18;UBERON:0003133!7.76e-27!24;UBERON:0005156!1.23e-24!26;UBERON:0000990!1.23e-24!26;UBERON:0003135!1.38e-24!15;UBERON:0003101!5.61e-23!16;UBERON:0000079!5.61e-23!16;UBERON:0000473!5.25e-21!14;UBERON:0003886!2.77e-16!38;UBERON:0002553!8.09e-16!39;UBERON:0000992!5.72e-15!3;UBERON:0002323!4.78e-14!37;UBERON:0004458!4.78e-14!37;UBERON:0000464!3.14e-10!57;UBERON:0001301!7.29e-07!3;UBERON:0006555!7.29e-07!3;UBERON:0005103!7.29e-07!3;UBERON:0000083!7.29e-07!3;UBERON:0009201!7.29e-07!3;UBERON:0004819!7.29e-07!3;UBERON:0006553!7.29e-07!3;UBERON:0003074!7.29e-07!3;UBERON:0003060!7.29e-07!3;UBERON:0000466!7.63e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.28e-15,14;UBERON:0003135,5.35e-14,15;UBERON:0003101,3.50e-13,16;UBERON:0000079,3.50e-13,16;UBERON:0004176,1.84e-12,17;UBERON:0009196,1.84e-12,17;UBERON:0009117,1.84e-12,17;UBERON:0000991,8.03e-12,18;UBERON:0005564,8.03e-12,18;UBERON:0003133,4.35e-09,24;UBERON:0005156,1.87e-08,26;UBERON:0000990,1.87e-08,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,25.3661822407886,0,0,0.777804753376191,0.258319646955462,0,0,0.39061315453185,0.629156066554265,13.5287107662563,9.21696020025169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p2@Tdrd1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:83561 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99MV1 | |||
|association_with_transcript=0bp_to_ENSMUST00000078723,ENSMUST00000121249,NM_001002240,NM_031387,uc008hzj.1,uc012bnt.1_5end | |||
|cluster_id=chr19:56900758..56900778,+ | |||
|description=CAGE_peak_2_at_Tdrd1_5end | |||
|id=chr19:56900758..56900778,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!1.75e-32!17;UBERON:0009196!1.75e-32!17;UBERON:0009117!1.75e-32!17;UBERON:0000991!1.36e-30!18;UBERON:0005564!1.36e-30!18;UBERON:0003133!7.76e-27!24;UBERON:0005156!1.23e-24!26;UBERON:0000990!1.23e-24!26;UBERON:0003135!1.38e-24!15;UBERON:0003101!5.61e-23!16;UBERON:0000079!5.61e-23!16;UBERON:0000473!5.25e-21!14;UBERON:0003886!2.77e-16!38;UBERON:0002553!8.09e-16!39;UBERON:0000992!5.72e-15!3;UBERON:0002323!4.78e-14!37;UBERON:0004458!4.78e-14!37;UBERON:0000464!3.14e-10!57;UBERON:0001301!7.29e-07!3;UBERON:0006555!7.29e-07!3;UBERON:0005103!7.29e-07!3;UBERON:0000083!7.29e-07!3;UBERON:0009201!7.29e-07!3;UBERON:0004819!7.29e-07!3;UBERON:0006553!7.29e-07!3;UBERON:0003074!7.29e-07!3;UBERON:0003060!7.29e-07!3;UBERON:0000466!7.63e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.28e-15,14;UBERON:0003135,5.35e-14,15;UBERON:0003101,3.50e-13,16;UBERON:0000079,3.50e-13,16;UBERON:0004176,1.84e-12,17;UBERON:0009196,1.84e-12,17;UBERON:0009117,1.84e-12,17;UBERON:0000991,8.03e-12,18;UBERON:0005564,8.03e-12,18;UBERON:0003133,4.35e-09,24;UBERON:0005156,1.87e-08,26;UBERON:0000990,1.87e-08,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,25.3661822407886,0,0,0.777804753376191,0.258319646955462,0,0,0.39061315453185,0.629156066554265,13.5287107662563,9.21696020025169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Tdrd1 | |||
}} |
Revision as of 09:31, 4 August 2015
Short description: | p2@Tdrd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tdrd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000078723, ENSMUST00000121249, NM_001002240, NM_031387, uc008hzj.1, uc012bnt.1_5end |
EntrezGene: | 83561 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.28e-15 | 14 |
male reproductive organ | 5.35e-14 | 15 |
male organism | 3.50e-13 | 16 |
male reproductive system | 3.50e-13 | 16 |
external genitalia | 1.84e-12 | 17 |
indifferent external genitalia | 1.84e-12 | 17 |
indifferent gonad | 1.84e-12 | 17 |
gonad | 8.03e-12 | 18 |
gonad primordium | 8.03e-12 | 18 |
reproductive organ | 4.35e-09 | 24 |
reproductive structure | 1.87e-08 | 26 |
reproductive system | 1.87e-08 | 26 |