FFCP PHASE1:Mm9::chr2:174170977..174171041,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=989 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:174170977..174171041,- | |||
|description=CAGE_peak_at_chr2:174170977..174171041,- | |description=CAGE_peak_at_chr2:174170977..174171041,- | ||
|id=chr2:174170977..174171041,- | |id=chr2:174170977..174171041,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.21e-07!73;UBERON:0005743!5.21e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.53e-08,92;UBERON:0001017,3.44e-07,73;UBERON:0000007,4.34e-07,8;UBERON:0003296,4.34e-07,8;UBERON:0010133,4.34e-07,8;UBERON:0001894,9.97e-07,10;UBERON:0006222,9.97e-07,10 | |||
|phase1_expression=1.92178616525753,0,0.454999239389536,0.30246421130683,0,0.503637815735669,0.700837921786577,0.774739940649458,0.985521055061667,0.70219357896598,0.68487187290202,0.558405112967355,0.342401459862411,0.524522414513984,0.333109761815663,0.202475267389826,0.699561878128147,0.788655413395594,0.411343300817216,1.27316895539409,1.36069264241712,1.88652807281682,0.783599367416806,0.799962113967033,2.06468352960453,1.72269589234506,0.86152399231815,0.215471232685889,1.52018735565099,0.756090389279792,0.665191531965914,0,0,0,0.866554859253824,0.332469290716985,0,0.418531630736908,0,0,0,0.683045484958446,0,1.38486499773135,1.4192770370732,1.28482726513177,3.12956537739216,2.61630187656536,2.85592037554813,2.91644848611425,2.2397827460058,2.87505128729943,0.671130424230945,0.725362142011344,0.336093799142464,1.80081605225163,2.86533439938757,6.70373719960675,3.03474691289397,3.1739458756322,3.80298842103708,2.71075625655306,0.889294796111139,3.5995988691256,5.93319817540185,3.5524005747305,2.69640099466564,3.07374644257244,0.518448061542388,2.02508907497536,1.26194976810829,2.28520787523043,1.54607978666129,1.46988959057945,0.670918297127655,0.919218786610021,1.10115880999389,2.93680877595932,1.84327839907492,3.16527090552465,1.73826522844578,1.56274011167028,3.62937898701795,5.6276261003168,6.41752640662602,1.47314292736834,1.13897344639282,2.23679334990361,0.757261933331841,0.831287161174641,0,0.860423876981386,0.679971333707751,2.15881276655127,0,0.448026887097336,1.82577746171277,1.87473354835864,4.93593408745451,2.12003744706204,0.845060518660083,1.28326477414318,0,0,4.32982082022428,2.28023878927589,4.54972000513305,1.02765491747154,0,2.07818994690755,3.81667718885499,5.1759131313064,2.7673859670727,5.27529241934179,1.76383060703557,2.51333182659351,1.23597483867187,0.433798070759735,0,1.7794353494215,0.662524555381181,0.484875253135222,0,0.292780797011547,2.09446706813455,0.766371165625774,1.43778149407104,0.599902730993408,0.381210681219194,0.748953197024114,0,0.376963056338593,2.08589184230732,1.02286182932132,2.28566849015516,1.46017136760982,2.85150218780886,1.61729061793121,1.0108910337347,0.210441855886474,1.69156575851515,2.06911893990126,1.80062129805349,3.46621081022145,0.95251098811859,2.17793324484245,1.87403449119458,0.776110112217047,1.07783996466421,1.13463648100692,1.05570674498369,3.06874025398605,2.22437799380478,1.74126083261083,2.26360350048738,3.98068533636986,0,0,1.70498099637356,1.24275463521301,2.57978665979206,3.42117916775928,1.65721314909647,2.55793501271625,2.77680803197281,2.79040733700489,1.60964040839772,2.45207218971056,2.46839774870221,2.79084688934462,0.56748166682099,2.48539978623065,0.878200461164203,1.07365135008297,1.26173969138476,0.720332286654991,0,0.264450566663544,2.77274725695804,2.55460339046482,1.15980715189884,0.80673409849337,1.11189021922435,1.52180500890047,1.89811624617805,1.15289268306808,1.00534083520108,0.994782360205754,0.779856348476481,0.898819408654221,1.51296634912286,0.796565093017469,1.13800740571849,2.17072173958485,1.1270773567308,2.44381593414377,2.52138233317913,0.911765658574141,0.505892296994058,0.590440591918409,0.941992367048249,1.72756029490521,0.889357881261447,0.500535317148282,0.982794975566015,0.449724224769707,0.608580364165509,0.964708639009667,1.52775511068852,1.15078454980324,0.486405680325106,0.823684239564244,2.87536413054709,1.48856379067401,1.5601883655728,0.757736633841335,0.179397413521912,0.964887042726734,0.369506380333209,2.4633883530163,0.977789858652155,3.39490171550376,2.81628297946203,2.1775813467436,3.09456733151818,2.14647012643579,0.788175720530955,0.664394068946325,0.637819074629948,2.29408640602033,1.20879487306127,1.44649058581512,1.50791283939272,1.63171705145613,0,0.827810238914197,3.05046120976805,3.8679856575427,1.96721934452011,2.27223834483936,1.26203287766503,1.95219372148319,0.646270193198397,1.67278158566786,1.55959071857676,0.849229592366497,2.83367491172426,3.79932615284705,1.58115111178609,1.60660658210904,0.709700426041343,4.98583690268315,2.28041743095006,0.494910368917606,0,4.85561272309963,5.13950046840077,3.20628635585027,1.18120757152309,3.99665692327106,0.775284879504663,2.18120237686503,1.42598951353889,1.26414703174326,2.10837217149998,1.03135543248187,8.17055053809091,4.68158844481407,4.13947788104814,7.93047029616891,6.91626911204867,12.8425548673491,11.3538824215463,11.8741330154694,1.17335854031855,2.1183207086382,1.32317038832977,0,0.807322133479528,0.241251699712623,0.835606408021955,0,0.582961673259701,1.48340241608408,0.341741761595705,5.15967169908056,2.59272338317596,0.753473828018764,0.136694227721025,0.457556346413045,0.679913719975421,0.559805809294632,0.552799895217695,0,1.10717597753397,2.64315307264903,4.42821897369385,1.88179466413022,1.9652630737156,1.07891477107857,1.07449492442937,1.57053565190418,1.55537967950151,1.86401793926078,0,1.94371509857172,3.64008679005615,0.583353565032143,5.94135187997563,2.19642963138012,1.99507305697782,1.0416350787516,0.838874755405687,0.483168241652012,0.576060012515731,0.316011120628178,1.82452693761148,2.87590680061516,1.94881234466693,0.358053391334963,0.993406773906324,0.841368146639782,0.295379054349154,0.201932899896295,0.609654453239999,0.100826185136841,0.292373642219257,0.577271049841977,0.467507608726276,1.36038230169127,0,0.0897138566094757,0.167884616364078,0.965947970160952,0.750729901804728,0.73260649706906,0.428736758158132,1.50471631210609,0.564751842617067,1.38097570952153,0.572895513439397,2.40594455281163,2.05524755931193,0.755393897389701,2.02506750069542,1.80128481289688,0.453142408984205,1.55328093525546,3.63255716544618,0.798049746802062,0.853668028770671,2.18796045361465,1.46729213839588,0.735374033800057,2.44471400581777,1.03017528619447,0,2.77966932940177,0.50695859978048,0.754505365544305,2.1537546718073,2.04880487695582,1.37845125493472,0.952587382566147,1.73826488917283,2.50781986602817,0.824171801606613,1.91358596174717,2.74295401908332,1.06485483695602,1.1921809497366,0.726732083161643,1.88218760830661,1.86152137361688,2.0122077016005,2.63069711437843,2.17286582153379,1.68342681497322,1.89816028998679,1.97008964751127,2.86461730218783,1.85924209423159,1.92906610981141,2.99772693525535,2.8071793013449,2.57845264857958,4.01705497344571,5.07360263974886,2.08681052058379 | |phase1_expression=1.92178616525753,0,0.454999239389536,0.30246421130683,0,0.503637815735669,0.700837921786577,0.774739940649458,0.985521055061667,0.70219357896598,0.68487187290202,0.558405112967355,0.342401459862411,0.524522414513984,0.333109761815663,0.202475267389826,0.699561878128147,0.788655413395594,0.411343300817216,1.27316895539409,1.36069264241712,1.88652807281682,0.783599367416806,0.799962113967033,2.06468352960453,1.72269589234506,0.86152399231815,0.215471232685889,1.52018735565099,0.756090389279792,0.665191531965914,0,0,0,0.866554859253824,0.332469290716985,0,0.418531630736908,0,0,0,0.683045484958446,0,1.38486499773135,1.4192770370732,1.28482726513177,3.12956537739216,2.61630187656536,2.85592037554813,2.91644848611425,2.2397827460058,2.87505128729943,0.671130424230945,0.725362142011344,0.336093799142464,1.80081605225163,2.86533439938757,6.70373719960675,3.03474691289397,3.1739458756322,3.80298842103708,2.71075625655306,0.889294796111139,3.5995988691256,5.93319817540185,3.5524005747305,2.69640099466564,3.07374644257244,0.518448061542388,2.02508907497536,1.26194976810829,2.28520787523043,1.54607978666129,1.46988959057945,0.670918297127655,0.919218786610021,1.10115880999389,2.93680877595932,1.84327839907492,3.16527090552465,1.73826522844578,1.56274011167028,3.62937898701795,5.6276261003168,6.41752640662602,1.47314292736834,1.13897344639282,2.23679334990361,0.757261933331841,0.831287161174641,0,0.860423876981386,0.679971333707751,2.15881276655127,0,0.448026887097336,1.82577746171277,1.87473354835864,4.93593408745451,2.12003744706204,0.845060518660083,1.28326477414318,0,0,4.32982082022428,2.28023878927589,4.54972000513305,1.02765491747154,0,2.07818994690755,3.81667718885499,5.1759131313064,2.7673859670727,5.27529241934179,1.76383060703557,2.51333182659351,1.23597483867187,0.433798070759735,0,1.7794353494215,0.662524555381181,0.484875253135222,0,0.292780797011547,2.09446706813455,0.766371165625774,1.43778149407104,0.599902730993408,0.381210681219194,0.748953197024114,0,0.376963056338593,2.08589184230732,1.02286182932132,2.28566849015516,1.46017136760982,2.85150218780886,1.61729061793121,1.0108910337347,0.210441855886474,1.69156575851515,2.06911893990126,1.80062129805349,3.46621081022145,0.95251098811859,2.17793324484245,1.87403449119458,0.776110112217047,1.07783996466421,1.13463648100692,1.05570674498369,3.06874025398605,2.22437799380478,1.74126083261083,2.26360350048738,3.98068533636986,0,0,1.70498099637356,1.24275463521301,2.57978665979206,3.42117916775928,1.65721314909647,2.55793501271625,2.77680803197281,2.79040733700489,1.60964040839772,2.45207218971056,2.46839774870221,2.79084688934462,0.56748166682099,2.48539978623065,0.878200461164203,1.07365135008297,1.26173969138476,0.720332286654991,0,0.264450566663544,2.77274725695804,2.55460339046482,1.15980715189884,0.80673409849337,1.11189021922435,1.52180500890047,1.89811624617805,1.15289268306808,1.00534083520108,0.994782360205754,0.779856348476481,0.898819408654221,1.51296634912286,0.796565093017469,1.13800740571849,2.17072173958485,1.1270773567308,2.44381593414377,2.52138233317913,0.911765658574141,0.505892296994058,0.590440591918409,0.941992367048249,1.72756029490521,0.889357881261447,0.500535317148282,0.982794975566015,0.449724224769707,0.608580364165509,0.964708639009667,1.52775511068852,1.15078454980324,0.486405680325106,0.823684239564244,2.87536413054709,1.48856379067401,1.5601883655728,0.757736633841335,0.179397413521912,0.964887042726734,0.369506380333209,2.4633883530163,0.977789858652155,3.39490171550376,2.81628297946203,2.1775813467436,3.09456733151818,2.14647012643579,0.788175720530955,0.664394068946325,0.637819074629948,2.29408640602033,1.20879487306127,1.44649058581512,1.50791283939272,1.63171705145613,0,0.827810238914197,3.05046120976805,3.8679856575427,1.96721934452011,2.27223834483936,1.26203287766503,1.95219372148319,0.646270193198397,1.67278158566786,1.55959071857676,0.849229592366497,2.83367491172426,3.79932615284705,1.58115111178609,1.60660658210904,0.709700426041343,4.98583690268315,2.28041743095006,0.494910368917606,0,4.85561272309963,5.13950046840077,3.20628635585027,1.18120757152309,3.99665692327106,0.775284879504663,2.18120237686503,1.42598951353889,1.26414703174326,2.10837217149998,1.03135543248187,8.17055053809091,4.68158844481407,4.13947788104814,7.93047029616891,6.91626911204867,12.8425548673491,11.3538824215463,11.8741330154694,1.17335854031855,2.1183207086382,1.32317038832977,0,0.807322133479528,0.241251699712623,0.835606408021955,0,0.582961673259701,1.48340241608408,0.341741761595705,5.15967169908056,2.59272338317596,0.753473828018764,0.136694227721025,0.457556346413045,0.679913719975421,0.559805809294632,0.552799895217695,0,1.10717597753397,2.64315307264903,4.42821897369385,1.88179466413022,1.9652630737156,1.07891477107857,1.07449492442937,1.57053565190418,1.55537967950151,1.86401793926078,0,1.94371509857172,3.64008679005615,0.583353565032143,5.94135187997563,2.19642963138012,1.99507305697782,1.0416350787516,0.838874755405687,0.483168241652012,0.576060012515731,0.316011120628178,1.82452693761148,2.87590680061516,1.94881234466693,0.358053391334963,0.993406773906324,0.841368146639782,0.295379054349154,0.201932899896295,0.609654453239999,0.100826185136841,0.292373642219257,0.577271049841977,0.467507608726276,1.36038230169127,0,0.0897138566094757,0.167884616364078,0.965947970160952,0.750729901804728,0.73260649706906,0.428736758158132,1.50471631210609,0.564751842617067,1.38097570952153,0.572895513439397,2.40594455281163,2.05524755931193,0.755393897389701,2.02506750069542,1.80128481289688,0.453142408984205,1.55328093525546,3.63255716544618,0.798049746802062,0.853668028770671,2.18796045361465,1.46729213839588,0.735374033800057,2.44471400581777,1.03017528619447,0,2.77966932940177,0.50695859978048,0.754505365544305,2.1537546718073,2.04880487695582,1.37845125493472,0.952587382566147,1.73826488917283,2.50781986602817,0.824171801606613,1.91358596174717,2.74295401908332,1.06485483695602,1.1921809497366,0.726732083161643,1.88218760830661,1.86152137361688,2.0122077016005,2.63069711437843,2.17286582153379,1.68342681497322,1.89816028998679,1.97008964751127,2.86461730218783,1.85924209423159,1.92906610981141,2.99772693525535,2.8071793013449,2.57845264857958,4.01705497344571,5.07360263974886,2.08681052058379 | ||
|short_description=p@chr2:174170977..174171041,- | |short_description=p@chr2:174170977..174171041,- | ||
}} | }} |
Latest revision as of 16:34, 4 August 2015
Short description: | p@chr2:174170977..174171041, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:174170977..174171041, - |
Coexpression cluster: | MCL_coexpression_mm9:989 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.53e-08 | 92 |
central nervous system | 3.44e-07 | 73 |
pituitary gland | 4.34e-07 | 8 |
gland of diencephalon | 4.34e-07 | 8 |
neuroendocrine gland | 4.34e-07 | 8 |
diencephalon | 9.97e-07 | 10 |
future diencephalon | 9.97e-07 | 10 |