FFCP PHASE1:Mm9::chr1:130094249..130094253,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:130094249..130094253,+|id=chr1:130094249..130094253,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!8.71e-09!10;UBERON:0000411!8.71e-09!10;UBERON:0001950!8.71e-09!10;UBERON:0007811!7.78e-08!86;UBERON:0000153!7.04e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.90e-49,10;UBERON:0000411,1.90e-49,10;UBERON:0001950,1.90e-49,10;UBERON:0002619,1.43e-28,17;UBERON:0000956,1.18e-27,21;UBERON:0001869,1.18e-27,21;UBERON:0000203,1.18e-27,21;UBERON:0003528,1.32e-19,29;UBERON:0002791,1.32e-19,29;UBERON:0001893,1.32e-19,29;UBERON:0002020,1.72e-16,34;UBERON:0002780,3.60e-14,39;UBERON:0001890,3.60e-14,39;UBERON:0006240,3.60e-14,39;UBERON:0003080,8.92e-14,40;UBERON:0000955,9.97e-14,47;UBERON:0006238,9.97e-14,47;UBERON:0002616,9.11e-12,46;UBERON:0003056,6.03e-11,49;UBERON:0001049,3.22e-10,52;UBERON:0005068,3.22e-10,52;UBERON:0006241,3.22e-10,52;UBERON:0007135,3.22e-10,52;UBERON:0000073,8.85e-10,54;UBERON:0001017,3.48e-08,73;UBERON:0002346,5.45e-08,64;UBERON:0003075,5.45e-08,64;UBERON:0007284,5.45e-08,64;UBERON:0001016,6.45e-08,75;UBERON:0010371,8.49e-07,73|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0,0.774739940649458,0.140788722151667,0.70219357896598,0.171217968225505,1.03703806693937,0.513602189793617,1.04904482902797,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0,2.72138528483423,0.297872853602656,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.186399445825301,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0,0,0.585561594023094,0.83778682725382,0.255457055208591,0.359445373517761,0,0.635351135365324,0.149790639404823,0.915001205637253,0.502617408451458,2.78118912307642,6.64860189058859,0.20778804455956,0.486723789203273,0.305518091550949,0.248813941220186,0,0.210441855886474,0.390361328888111,0.229902104433473,0,0.30140963567143,0.612328492361951,0.384341160854549,0.468508622798644,0,0,0.378212160335639,0,0,0,0.696504333044333,0.205782136407943,0,0,0,1.42081749697796,0,0.234526059981096,0.180062061461015,0,0,0.462801338662135,0.465067889500816,0.536546802799238,0.467061369468678,0.16455984991348,0.820837320395476,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,0.841159794256509,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.799739588268102,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.486405680325106,0.549122826376163,0,0.744281895337007,0.624075346229121,0,0,0,0.184753190166605,0.189491411770485,0,0.509235257325564,0.704070744865506,0,0,0.780534591431195,0.157635144106191,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.144649058581512,0,2.17562273527484,0.491764273019036,0,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,0,0.477937595905104,0,0,0,0.292255857911312,0.395287777946524,2.57057053137446,0.283880170416537,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0.948110273807448,0,0,0.680879211507576,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0,0.180938774784468,0.477489376012546,0,0.582961673259701,0,0,0,0.370389054739423,0.565105371014073,0.683471138605126,0.457556346413045,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0,0.938857909166032,0.39061315453185,0.209718688851422,0,0.864090018773596,0,0.202725215290164,0.410843828659309,0.389762468933385,0,0.198681354781265,0.961563596159751,0.886137163047463,0.504832249740738,0.609654453239999,0.907435666231565,0.194915761479505,0.769694733122636,0.584384510907845,0.226730383615211,0,0.448569283047378,0,0,0,0,0.214368379079066,0,2.25900737046827,3.22227665555024,2.86447756719698,14.0919609521824,4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:130094249..130094253,+ | |||
|description=CAGE_peak_at_chr1:130094249..130094253,+ | |||
|id=chr1:130094249..130094253,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!8.71e-09!10;UBERON:0000411!8.71e-09!10;UBERON:0001950!8.71e-09!10;UBERON:0007811!7.78e-08!86;UBERON:0000153!7.04e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.90e-49,10;UBERON:0000411,1.90e-49,10;UBERON:0001950,1.90e-49,10;UBERON:0002619,1.43e-28,17;UBERON:0000956,1.18e-27,21;UBERON:0001869,1.18e-27,21;UBERON:0000203,1.18e-27,21;UBERON:0003528,1.32e-19,29;UBERON:0002791,1.32e-19,29;UBERON:0001893,1.32e-19,29;UBERON:0002020,1.72e-16,34;UBERON:0002780,3.60e-14,39;UBERON:0001890,3.60e-14,39;UBERON:0006240,3.60e-14,39;UBERON:0003080,8.92e-14,40;UBERON:0000955,9.97e-14,47;UBERON:0006238,9.97e-14,47;UBERON:0002616,9.11e-12,46;UBERON:0003056,6.03e-11,49;UBERON:0001049,3.22e-10,52;UBERON:0005068,3.22e-10,52;UBERON:0006241,3.22e-10,52;UBERON:0007135,3.22e-10,52;UBERON:0000073,8.85e-10,54;UBERON:0001017,3.48e-08,73;UBERON:0002346,5.45e-08,64;UBERON:0003075,5.45e-08,64;UBERON:0007284,5.45e-08,64;UBERON:0001016,6.45e-08,75;UBERON:0010371,8.49e-07,73 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0,0.774739940649458,0.140788722151667,0.70219357896598,0.171217968225505,1.03703806693937,0.513602189793617,1.04904482902797,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0,2.72138528483423,0.297872853602656,0,0,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.550640256485045,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.186399445825301,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0,0,0.585561594023094,0.83778682725382,0.255457055208591,0.359445373517761,0,0.635351135365324,0.149790639404823,0.915001205637253,0.502617408451458,2.78118912307642,6.64860189058859,0.20778804455956,0.486723789203273,0.305518091550949,0.248813941220186,0,0.210441855886474,0.390361328888111,0.229902104433473,0,0.30140963567143,0.612328492361951,0.384341160854549,0.468508622798644,0,0,0.378212160335639,0,0,0,0.696504333044333,0.205782136407943,0,0,0,1.42081749697796,0,0.234526059981096,0.180062061461015,0,0,0.462801338662135,0.465067889500816,0.536546802799238,0.467061369468678,0.16455984991348,0.820837320395476,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,0.841159794256509,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.799739588268102,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.486405680325106,0.549122826376163,0,0.744281895337007,0.624075346229121,0,0,0,0.184753190166605,0.189491411770485,0,0.509235257325564,0.704070744865506,0,0,0.780534591431195,0.157635144106191,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.144649058581512,0,2.17562273527484,0.491764273019036,0,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,0,0.477937595905104,0,0,0,0.292255857911312,0.395287777946524,2.57057053137446,0.283880170416537,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.775284879504663,0.727067458955011,0.356497378384721,0.948110273807448,0,0,0.680879211507576,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0,0.180938774784468,0.477489376012546,0,0.582961673259701,0,0,0,0.370389054739423,0.565105371014073,0.683471138605126,0.457556346413045,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0.495920734352016,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0,0.938857909166032,0.39061315453185,0.209718688851422,0,0.864090018773596,0,0.202725215290164,0.410843828659309,0.389762468933385,0,0.198681354781265,0.961563596159751,0.886137163047463,0.504832249740738,0.609654453239999,0.907435666231565,0.194915761479505,0.769694733122636,0.584384510907845,0.226730383615211,0,0.448569283047378,0,0,0,0,0.214368379079066,0,2.25900737046827,3.22227665555024,2.86447756719698,14.0919609521824,4.11049511862385,4.5323633843382,4.05013500139084,3.60256962579376,4.53142408984205,4.14208249401456,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0.320125762024346,0.459483751644906,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0,0,0,0.436039249896986,0.0941093804153306,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr1:130094249..130094253,+ | |||
}} |
Latest revision as of 17:16, 4 August 2015
Short description: | p@chr1:130094249..130094253, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:130094249..130094253, + |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.90e-49 | 10 |
visual cortex | 1.90e-49 | 10 |
neocortex | 1.90e-49 | 10 |
regional part of cerebral cortex | 1.43e-28 | 17 |
cerebral cortex | 1.18e-27 | 21 |
cerebral hemisphere | 1.18e-27 | 21 |
pallium | 1.18e-27 | 21 |
brain grey matter | 1.32e-19 | 29 |
regional part of telencephalon | 1.32e-19 | 29 |
telencephalon | 1.32e-19 | 29 |
gray matter | 1.72e-16 | 34 |
regional part of forebrain | 3.60e-14 | 39 |
forebrain | 3.60e-14 | 39 |
future forebrain | 3.60e-14 | 39 |
anterior neural tube | 8.92e-14 | 40 |
brain | 9.97e-14 | 47 |
future brain | 9.97e-14 | 47 |
regional part of brain | 9.11e-12 | 46 |
pre-chordal neural plate | 6.03e-11 | 49 |
neural tube | 3.22e-10 | 52 |
neural rod | 3.22e-10 | 52 |
future spinal cord | 3.22e-10 | 52 |
neural keel | 3.22e-10 | 52 |
regional part of nervous system | 8.85e-10 | 54 |
central nervous system | 3.48e-08 | 73 |
neurectoderm | 5.45e-08 | 64 |
neural plate | 5.45e-08 | 64 |
presumptive neural plate | 5.45e-08 | 64 |
nervous system | 6.45e-08 | 75 |
ecto-epithelium | 8.49e-07 | 73 |