FFCP PHASE1:Mm9::chr7:20163393..20163408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20163393..20163408,- | |||
|description=CAGE_peak_at_chr7:20163393..20163408,- | |description=CAGE_peak_at_chr7:20163393..20163408,- | ||
|id=chr7:20163393..20163408,- | |id=chr7:20163393..20163408,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.59e-11,32;CL:0002032,8.59e-11,32;CL:0000037,8.59e-11,32;CL:0000837,8.59e-11,32;CL:0000049,4.79e-10,19;CL:0000763,5.22e-07,16;CL:0002320,6.70e-07,46;CL:0000134,6.70e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.84e-11,3;DOID:4045,1.84e-11,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.11e-09,32;UBERON:0002106,1.96e-08,6;UBERON:0004457,1.96e-08,6;UBERON:0000042,1.96e-08,6;UBERON:0004854,1.96e-08,6;UBERON:0009034,1.96e-08,6;UBERON:0002095,1.96e-08,6;UBERON:0004782,1.96e-08,6;UBERON:0003281,1.96e-08,6;UBERON:0009664,1.96e-08,6;UBERON:0002296,1.96e-08,6;UBERON:0005602,1.96e-08,6;UBERON:0001179,1.96e-08,6;UBERON:0006293,1.96e-08,6;UBERON:0002193,1.40e-07,48;UBERON:0002405,1.40e-07,48;UBERON:0002371,5.22e-07,16;UBERON:0002384,6.70e-07,46 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0.699561878128147,2.5236973228659,2.74228867211478,2.12194825899015,0.0850432901510698,6.25532992565577,4.17919662622297,1.43993180514066,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,6.27797446105362,3.1253413780952,4.18818995179039,5.88231488031014,4.78131839470912,9.71020706062307,0,0,0,0,0,0,0,0.139986421625363,0,2.34895648480831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,4.40194402200192,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,3.5384422077995,0,0.662524555381181,0.484875253135222,0,0,0.41889341362691,0,0.718890747035522,1.19980546198682,1.90605340609597,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0,2.1066395619397,1.54408744268829,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.648540907100142,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,1.10732344824387,0,0.655453258862952,0.345369963731791,0.578596234326046,0,0,0,0.827810238914197,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.98931751764888,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0,1.19609616558497,0.206386867963223,1.11116716421827,0.941842285023455,1.0935538217682,1.14389086603261,0.849892149969277,0.559805809294632,0.829199842826543,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0.129920822977795,0,0,0.240390899039938,0,0,0,0.302478555410522,0.194915761479505,0.288635524920988,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0.772758376128762,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.407412341537585,0,0,0,0,0,0.192906610981141,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0.699561878128147,2.5236973228659,2.74228867211478,2.12194825899015,0.0850432901510698,6.25532992565577,4.17919662622297,1.43993180514066,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,6.27797446105362,3.1253413780952,4.18818995179039,5.88231488031014,4.78131839470912,9.71020706062307,0,0,0,0,0,0,0,0.139986421625363,0,2.34895648480831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,4.40194402200192,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,3.5384422077995,0,0.662524555381181,0.484875253135222,0,0,0.41889341362691,0,0.718890747035522,1.19980546198682,1.90605340609597,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0.348252166522167,0,0,2.1066395619397,1.54408744268829,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.648540907100142,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,1.10732344824387,0,0.655453258862952,0.345369963731791,0.578596234326046,0,0,0,0.827810238914197,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.98931751764888,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0,1.19609616558497,0.206386867963223,1.11116716421827,0.941842285023455,1.0935538217682,1.14389086603261,0.849892149969277,0.559805809294632,0.829199842826543,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0,0.129920822977795,0,0,0.240390899039938,0,0,0,0.302478555410522,0.194915761479505,0.288635524920988,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0.772758376128762,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.407412341537585,0,0,0,0,0,0.192906610981141,0,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr7:20163393..20163408,- | |short_description=p@chr7:20163393..20163408,- | ||
}} | }} |
Latest revision as of 18:08, 4 August 2015
Short description: | p@chr7:20163393..20163408, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20163393..20163408, - |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.59e-11 | 32 |
hematopoietic oligopotent progenitor cell | 8.59e-11 | 32 |
hematopoietic stem cell | 8.59e-11 | 32 |
hematopoietic multipotent progenitor cell | 8.59e-11 | 32 |
common myeloid progenitor | 4.79e-10 | 19 |
myeloid cell | 5.22e-07 | 16 |
connective tissue cell | 6.70e-07 | 46 |
mesenchymal cell | 6.70e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.11e-09 | 32 |
spleen | 1.96e-08 | 6 |
cavity lining | 1.96e-08 | 6 |
serous membrane | 1.96e-08 | 6 |
gastrointestinal system mesentery | 1.96e-08 | 6 |
stomach region | 1.96e-08 | 6 |
mesentery | 1.96e-08 | 6 |
gastrointestinal system serosa | 1.96e-08 | 6 |
mesentery of stomach | 1.96e-08 | 6 |
gut mesentery | 1.96e-08 | 6 |
dorsal mesentery | 1.96e-08 | 6 |
dorsal mesogastrium | 1.96e-08 | 6 |
peritoneal cavity | 1.96e-08 | 6 |
spleen primordium | 1.96e-08 | 6 |
hemolymphoid system | 1.40e-07 | 48 |
immune system | 1.40e-07 | 48 |
bone marrow | 5.22e-07 | 16 |
connective tissue | 6.70e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.84e-11 | 3 |
muscle cancer | 1.84e-11 | 3 |