Personal tools

FFCP PHASE1:Mm9::chr6:113421458..113421469,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=171095|HGNC=|UniProt=G3X9C0,Q8K4C2,D3Z7I4|association_with_transcript=9bp_to_NM_134159,NM_178942,uc009dgk.2,uc009dgl.2_5end|description=CAGE_peak_3_at_Il17rc_5end|id=chr6:113421458..113421469,+|ontology_enrichment_celltype=CL:0000066!5.11e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,2.51e-08,25;CL:0000223,1.89e-07,20;CL:0002076,2.43e-07,15;CL:0002563,8.00e-07,9;CL:0002251,8.00e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.74e-08!43;UBERON:0005409!4.45e-08!59;UBERON:0000344!6.29e-08!15;UBERON:0004119!2.67e-07!130;UBERON:0000925!2.67e-07!130;UBERON:0006595!2.67e-07!130;UBERON:0001242!4.20e-07!13;UBERON:0000060!4.20e-07!13;UBERON:0001262!4.20e-07!13;UBERON:0004786!4.20e-07!13;UBERON:0001007!9.30e-07!128;UBERON:0001555!9.30e-07!128;UBERON:0007026!9.30e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.33e-09,15;UBERON:0001242,3.13e-08,13;UBERON:0001262,3.13e-08,13;UBERON:0004786,3.13e-08,13;UBERON:0003350,8.00e-07,9;UBERON:0004808,8.00e-07,9;UBERON:0001277,8.00e-07,9;UBERON:0005409,9.13e-07,47|phase1_expression=0.640595388419176,3.48975407639361,4.54999239389536,5.14189159221611,5.50985302940982,3.86122325397347,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0.0992909512008853,0.261199789138935,2.23989391910769,2.06468352960453,4.59385571292016,3.01533397311352,4.52489588640367,3.80046838912748,4.28451220591882,3.76941868114018,0,0,0,1.1554064790051,1.32987716286794,1.22501613757421,0,0,0,0,0,0,1.38486499773135,2.83855407414641,3.48738829107195,3.12956537739216,3.2703773457067,2.19686182734472,1.36100929351998,1.39986421625363,1.43752564364972,0,0,0,5.40244815675489,3.43840127926508,2.06268836910977,0,0,0,2.37191172448392,0.889294796111139,2.2497492932035,0.988866362566974,0,1.19840044207362,0.768436610643109,0.207379224616955,0,0,0.285650984403804,0,0,0,0.919218786610021,0,0,0.46081959976873,0.263772575460388,0,0,0.279182999001381,1.68828783009504,0,0.294628585473668,0.142371680799103,0,0.681535739998656,1.88928900266964,0.869593466105033,2.58127163094416,2.03991400112325,2.15881276655127,1.94932925234301,0.448026887097336,1.12355536105401,5.62420064507591,5.71529210126311,8.48014978824817,0.563373679106722,6.41632387071589,0,0,2.16491041011214,2.02687892380079,1.51657333504435,1.7127581957859,0,1.1875371125186,0.346970653532272,0,0.230615497256059,0.150722640552623,1.29347577849275,1.50799909595611,1.73036477414062,0.86759614151947,0,0.808834249737046,0.883366073841574,0,5.59175283654366,0,0.209446706813455,2.29911349687732,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,1.2220723662038,1.11966273549084,2.0217820674694,0.841767423545896,0.130120442962704,0,0.180062129805349,0.452114453507145,0.816437989815934,0.512454881139399,0.374806898238915,0.776110112217047,0,0.378212160335639,0.351902248327898,0.657587197282725,0.834141747676794,2.78601733217733,1.4404749548556,0,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0.771335564436891,0.465067889500816,0,0.583826711835847,0.822799249567402,0.164167464079095,0.648550476366846,0.292399974850665,0.658650345873152,0.268412837520744,0.210289948564127,0.102904612379284,0.991256348951394,0.793351699990633,0,0.464473343720877,0.257734922644187,1.4117846723634,0.667134131534611,0.380451252225118,1.89811624617805,0.329397909448022,0.502670417600539,0.198956472041151,1.16978452271472,2.69645822596266,1.94524244887225,1.7922714592893,0.379335801906163,0.456994050438915,0,0.407302655690628,0.581857461502877,0.98190147846446,0.758838445491087,1.32849133181642,1.255989822731,1.60416313098341,1.1858105083486,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.72353147925725,0.763877555344259,0.287696137450811,0.972811360650212,0.823684239564244,1.43768206527355,2.23284568601102,1.5601883655728,1.26289438973556,1.25578189465339,2.41221760681684,0.739012760666419,0.189491411770485,0.325929952884052,0.678980343100753,1.17345124144251,0.335012514883631,0.238043640886014,1.36593553500459,0.630540576424764,1.10732344824387,0.637819074629948,0.163863314715738,1.03610989119537,0.723245292907558,0,0,0.491764273019036,1.93155722413313,0,0.117211686592203,1.96721934452011,0.757412781613119,0.315508219416257,1.17131623288992,0.430846795465598,0.477937595905104,1.11399337041197,0.283076530788832,0,1.46127928955656,0,0,0.709700426041343,1.95872164033981,0.325773918707152,3.13443233647817,1.32745138339963,0.485561272309963,1.209294227859,0.565815239267694,1.18120757152309,1.22974059177571,1.03371317267288,1.45413491791002,1.06949213515416,0.948110273807448,3.16255825724996,4.12542172992747,0.680879211507576,0,0.129358683782755,0.643011105094777,0.354680467284547,1.07021290561242,0.493647061806363,0.608929898229199,2.11204537257339,1.90648863777438,4.19003956304428,2.96795255294664,3.22928853391811,1.32688434841943,3.58117032009409,2.29797259643086,0.874442509889552,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,3.81868247206045,0.474503990371703,0.406638934253697,1.29606408986162,2.29997125615916,2.62035076495413,1.88810084938749,2.14898984885873,4.18809507174447,2.85152941241944,0.621339313086926,0,0.149516546043979,0.165458490457098,1.16670713006429,0.904118764344118,1.18269287843545,0.58678619322877,1.17183946359555,0.314578033277133,0.483168241652012,0.288030006257865,0,0.608175645870493,0.924398614483445,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,2.72076460338254,1.55390167361845,0.0897138566094757,1.00730769818447,1.35232715822533,2.064507229963,1.28206136987086,3.64426244434412,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.341467211508268,0.243106717068294,0,1.2869045591501,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,1.52087579934144,0.754505365544305,1.40462261204824,0.960377286073039,0.631790158511746,0,0.463537303779422,0.38581844092741,1.23625770240992,0.883193520806384,1.02860775715625,0.177475806159338,0.715308569841963,0.436039249896986,0.846984423737976,0.507687647350059,0.548783918618318,0.526139422875686,0.679020569229309,1.12228454331548,0.474540072496697,0.689531376628944,0.409231043169689,0.619747364743864,1.54325288784913,1.24905288968973,1.40358965067245,1.50409737833809,0.57386499620653,0,0.927471342481686|short_description=p3@Il17rc}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:171095
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:G3X9C0,uniprot:Q8K4C2,uniprot:D3Z7I4
|association_with_transcript=9bp_to_NM_134159,NM_178942,uc009dgk.2,uc009dgl.2_5end
|cluster_id=chr6:113421458..113421469,+
|description=CAGE_peak_3_at_Il17rc_5end
|id=chr6:113421458..113421469,+
|ontology_enrichment_celltype=CL:0000066!5.11e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,2.51e-08,25;CL:0000223,1.89e-07,20;CL:0002076,2.43e-07,15;CL:0002563,8.00e-07,9;CL:0002251,8.00e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!2.74e-08!43;UBERON:0005409!4.45e-08!59;UBERON:0000344!6.29e-08!15;UBERON:0004119!2.67e-07!130;UBERON:0000925!2.67e-07!130;UBERON:0006595!2.67e-07!130;UBERON:0001242!4.20e-07!13;UBERON:0000060!4.20e-07!13;UBERON:0001262!4.20e-07!13;UBERON:0004786!4.20e-07!13;UBERON:0001007!9.30e-07!128;UBERON:0001555!9.30e-07!128;UBERON:0007026!9.30e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.33e-09,15;UBERON:0001242,3.13e-08,13;UBERON:0001262,3.13e-08,13;UBERON:0004786,3.13e-08,13;UBERON:0003350,8.00e-07,9;UBERON:0004808,8.00e-07,9;UBERON:0001277,8.00e-07,9;UBERON:0005409,9.13e-07,47
|phase1_expression=0.640595388419176,3.48975407639361,4.54999239389536,5.14189159221611,5.50985302940982,3.86122325397347,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0.0992909512008853,0.261199789138935,2.23989391910769,2.06468352960453,4.59385571292016,3.01533397311352,4.52489588640367,3.80046838912748,4.28451220591882,3.76941868114018,0,0,0,1.1554064790051,1.32987716286794,1.22501613757421,0,0,0,0,0,0,1.38486499773135,2.83855407414641,3.48738829107195,3.12956537739216,3.2703773457067,2.19686182734472,1.36100929351998,1.39986421625363,1.43752564364972,0,0,0,5.40244815675489,3.43840127926508,2.06268836910977,0,0,0,2.37191172448392,0.889294796111139,2.2497492932035,0.988866362566974,0,1.19840044207362,0.768436610643109,0.207379224616955,0,0,0.285650984403804,0,0,0,0.919218786610021,0,0,0.46081959976873,0.263772575460388,0,0,0.279182999001381,1.68828783009504,0,0.294628585473668,0.142371680799103,0,0.681535739998656,1.88928900266964,0.869593466105033,2.58127163094416,2.03991400112325,2.15881276655127,1.94932925234301,0.448026887097336,1.12355536105401,5.62420064507591,5.71529210126311,8.48014978824817,0.563373679106722,6.41632387071589,0,0,2.16491041011214,2.02687892380079,1.51657333504435,1.7127581957859,0,1.1875371125186,0.346970653532272,0,0.230615497256059,0.150722640552623,1.29347577849275,1.50799909595611,1.73036477414062,0.86759614151947,0,0.808834249737046,0.883366073841574,0,5.59175283654366,0,0.209446706813455,2.29911349687732,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,1.2220723662038,1.11966273549084,2.0217820674694,0.841767423545896,0.130120442962704,0,0.180062129805349,0.452114453507145,0.816437989815934,0.512454881139399,0.374806898238915,0.776110112217047,0,0.378212160335639,0.351902248327898,0.657587197282725,0.834141747676794,2.78601733217733,1.4404749548556,0,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0.771335564436891,0.465067889500816,0,0.583826711835847,0.822799249567402,0.164167464079095,0.648550476366846,0.292399974850665,0.658650345873152,0.268412837520744,0.210289948564127,0.102904612379284,0.991256348951394,0.793351699990633,0,0.464473343720877,0.257734922644187,1.4117846723634,0.667134131534611,0.380451252225118,1.89811624617805,0.329397909448022,0.502670417600539,0.198956472041151,1.16978452271472,2.69645822596266,1.94524244887225,1.7922714592893,0.379335801906163,0.456994050438915,0,0.407302655690628,0.581857461502877,0.98190147846446,0.758838445491087,1.32849133181642,1.255989822731,1.60416313098341,1.1858105083486,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.72353147925725,0.763877555344259,0.287696137450811,0.972811360650212,0.823684239564244,1.43768206527355,2.23284568601102,1.5601883655728,1.26289438973556,1.25578189465339,2.41221760681684,0.739012760666419,0.189491411770485,0.325929952884052,0.678980343100753,1.17345124144251,0.335012514883631,0.238043640886014,1.36593553500459,0.630540576424764,1.10732344824387,0.637819074629948,0.163863314715738,1.03610989119537,0.723245292907558,0,0,0.491764273019036,1.93155722413313,0,0.117211686592203,1.96721934452011,0.757412781613119,0.315508219416257,1.17131623288992,0.430846795465598,0.477937595905104,1.11399337041197,0.283076530788832,0,1.46127928955656,0,0,0.709700426041343,1.95872164033981,0.325773918707152,3.13443233647817,1.32745138339963,0.485561272309963,1.209294227859,0.565815239267694,1.18120757152309,1.22974059177571,1.03371317267288,1.45413491791002,1.06949213515416,0.948110273807448,3.16255825724996,4.12542172992747,0.680879211507576,0,0.129358683782755,0.643011105094777,0.354680467284547,1.07021290561242,0.493647061806363,0.608929898229199,2.11204537257339,1.90648863777438,4.19003956304428,2.96795255294664,3.22928853391811,1.32688434841943,3.58117032009409,2.29797259643086,0.874442509889552,0.18542530201051,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,3.81868247206045,0.474503990371703,0.406638934253697,1.29606408986162,2.29997125615916,2.62035076495413,1.88810084938749,2.14898984885873,4.18809507174447,2.85152941241944,0.621339313086926,0,0.149516546043979,0.165458490457098,1.16670713006429,0.904118764344118,1.18269287843545,0.58678619322877,1.17183946359555,0.314578033277133,0.483168241652012,0.288030006257865,0,0.608175645870493,0.924398614483445,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0.0762068066549998,0,0,0.192423683280659,0.116876902181569,2.72076460338254,1.55390167361845,0.0897138566094757,1.00730769818447,1.35232715822533,2.064507229963,1.28206136987086,3.64426244434412,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.341467211508268,0.243106717068294,0,1.2869045591501,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,1.52087579934144,0.754505365544305,1.40462261204824,0.960377286073039,0.631790158511746,0,0.463537303779422,0.38581844092741,1.23625770240992,0.883193520806384,1.02860775715625,0.177475806159338,0.715308569841963,0.436039249896986,0.846984423737976,0.507687647350059,0.548783918618318,0.526139422875686,0.679020569229309,1.12228454331548,0.474540072496697,0.689531376628944,0.409231043169689,0.619747364743864,1.54325288784913,1.24905288968973,1.40358965067245,1.50409737833809,0.57386499620653,0,0.927471342481686
|short_description=p3@Il17rc
}}

Revision as of 22:07, 4 August 2015

Short description:p3@Il17rc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Il17rc_5end
Coexpression cluster:NA
Association with transcript: 9bp_to_NM_134159, NM_178942, uc009dgk.2, uc009dgl.2_5end
EntrezGene:171095
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Il17rc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell2.51e-0825
endodermal cell1.89e-0720
endo-epithelial cell2.43e-0715
intestinal epithelial cell8.00e-079
epithelial cell of alimentary canal8.00e-079

Uber anatomy
Ontology termp-valuen
mucosa2.33e-0915
intestinal mucosa3.13e-0813
wall of intestine3.13e-0813
gastrointestinal system mucosa3.13e-0813
epithelium of mucosa8.00e-079
gastrointestinal system epithelium8.00e-079
intestinal epithelium8.00e-079
gastrointestinal system9.13e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:113421458..113421469,%2B&oldid=3826804"