FFCP PHASE1:Mm9::chr15:102110934..102110960,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=762 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:102110934..102110960,+ | |||
|description=CAGE_peak_at_chr15:102110934..102110960,+ | |description=CAGE_peak_at_chr15:102110934..102110960,+ | ||
|id=chr15:102110934..102110960,+ | |id=chr15:102110934..102110960,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.12e-10,3;CL:0002540,1.12e-10,3;CL:0000192,2.87e-10,3;CL:0000359,2.87e-10,3;CL:0002539,2.87e-10,3;CL:0000514,2.87e-10,3;CL:0000680,9.97e-09,6;CL:0000187,9.97e-09,6;CL:0000056,9.97e-09,6;CL:0002194,4.92e-08,4;CL:0000766,4.92e-08,4;CL:0000234,4.92e-08,4;CL:0000576,4.92e-08,4;CL:0000235,4.92e-08,4;CL:0000864,4.92e-08,4;CL:0002009,4.92e-08,4;CL:0000040,4.92e-08,4;CL:0000559,4.92e-08,4;CL:0000878,1.68e-07,2;CL:0000129,1.68e-07,2;CL:0000222,1.74e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.87e-10,3;UBERON:0004237,2.87e-10,3;UBERON:0004695,2.87e-10,3;UBERON:0002111,2.87e-10,3;UBERON:0004178,2.87e-10,3;UBERON:0002204,1.85e-08,32;UBERON:0000947,8.41e-08,4;UBERON:0001637,8.41e-08,4;UBERON:0004573,8.41e-08,4;UBERON:0003509,8.41e-08,4;UBERON:0004571,8.41e-08,4;UBERON:0010191,8.41e-08,4;UBERON:0004572,8.41e-08,4;UBERON:0001155,1.16e-07,2;UBERON:0000059,1.16e-07,2;UBERON:0002371,6.06e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.258246646883153,0.422366166455,0.468129052643987,0.513653904676515,0.638177271962691,0.171200729931206,0.174840804837995,0.333109761815663,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.255129870453209,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,2.54012269383853,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0,0.683045484958446,0,3.52511090331616,2.43304634926835,1.28482726513177,0.782391344348039,0.65407546914134,0.439372365468944,0.58328969722285,0.419959264876088,0,0,0,0.336093799142464,1.80081605225163,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0,1.3498495759221,6.92206453796882,4.2628806896766,2.39680088414724,2.30530983192933,0.518448061542388,0.270011876663381,0.630974884054146,0.285650984403804,0.220868540951614,0.367472397644862,0,0,0,0,0.307213066512487,0.263772575460388,0.365950574409639,0,0.837548997004143,0,0.30559649555362,0,0.569486723196412,0.372798891650601,0.302904773332736,0.453429360640713,0.289864488701678,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.421333260395256,0.170430322578058,0.779358013808606,0,0,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.45673551887624,0,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,3.72783522436244,0,3.35114730901528,2.04365644166873,0.11981512450592,0,0,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.509196819251581,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0.378212160335639,0.351902248327898,1.31517439456545,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,0,0.205809224758569,0.991256348951394,0.793351699990633,0,0,0.128867461322093,0.403367049246685,0,0,2.84717436926707,0,0.754005626400808,1.1937388322469,0.974820435595601,1.79763881730844,1.08069024937347,0.796565093017469,0.758671603812327,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0,0.123397163921801,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0,0.50925170356284,0.287696137450811,1.45921704097532,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.568474235311454,0.488894929326078,0,0,0,0,0.390267295715598,0.315270288212382,0,0,0,0.172684981865896,0.289298117163023,3.01582567878545,0.54390568381871,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0.716906393857656,2.22798674082394,0,0,0.876767573733936,1.18586333383957,0,0,0.35613120733451,0.651547837414304,0.494910368917606,1.32745138339963,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0,0,0.469343416127421,0.42366414172764,0,0.49465875882444,1.45317984026315,0.241251699712623,0.119372344003136,0.164140899745061,2.04036585640896,0.556275906031529,0.341741761595705,0.412773735926445,0,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.324016022465404,0,0,0.134864346384821,0.247960367176008,1.04702376793612,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.405450430580328,0.616265742988964,0.77952493786677,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0.350630706544707,0.226730383615211,0.221985953374065,0.448569283047378,0.335769232728157,0.386379188064381,0.187682475451182,0.36630324853453,0.857473516316263,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0,0,0,0.512200817262403,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0.258246646883153,0.422366166455,0.468129052643987,0.513653904676515,0.638177271962691,0.171200729931206,0.174840804837995,0.333109761815663,0.202475267389826,0,0.315462165358238,0.411343300817216,0.42438965179803,0.255129870453209,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,2.54012269383853,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0,0.683045484958446,0,3.52511090331616,2.43304634926835,1.28482726513177,0.782391344348039,0.65407546914134,0.439372365468944,0.58328969722285,0.419959264876088,0,0,0,0.336093799142464,1.80081605225163,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0,1.3498495759221,6.92206453796882,4.2628806896766,2.39680088414724,2.30530983192933,0.518448061542388,0.270011876663381,0.630974884054146,0.285650984403804,0.220868540951614,0.367472397644862,0,0,0,0,0.307213066512487,0.263772575460388,0.365950574409639,0,0.837548997004143,0,0.30559649555362,0,0.569486723196412,0.372798891650601,0.302904773332736,0.453429360640713,0.289864488701678,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.421333260395256,0.170430322578058,0.779358013808606,0,0,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.45673551887624,0,0,0,0.304465478312141,0.461230994512117,0.150722640552623,0.587943535678524,0.125666591329675,0.494389935468748,0,0,0.161766849947409,0,0,3.72783522436244,0,3.35114730901528,2.04365644166873,0.11981512450592,0,0,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.509196819251581,0.124406970610093,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0.378212160335639,0.351902248327898,1.31517439456545,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0,0,0.205809224758569,0.991256348951394,0.793351699990633,0,0,0.128867461322093,0.403367049246685,0,0,2.84717436926707,0,0.754005626400808,1.1937388322469,0.974820435595601,1.79763881730844,1.08069024937347,0.796565093017469,0.758671603812327,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0,0.123397163921801,0,0.333690211432188,0.393117990226406,0,0.405720242777006,0,0.50925170356284,0.287696137450811,1.45921704097532,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.568474235311454,0.488894929326078,0,0,0,0,0.390267295715598,0.315270288212382,0,0,0,0.172684981865896,0.289298117163023,3.01582567878545,0.54390568381871,0,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0.716906393857656,2.22798674082394,0,0,0.876767573733936,1.18586333383957,0,0,0.35613120733451,0.651547837414304,0.494910368917606,1.32745138339963,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0,0,0,0.469343416127421,0.42366414172764,0,0.49465875882444,1.45317984026315,0.241251699712623,0.119372344003136,0.164140899745061,2.04036585640896,0.556275906031529,0.341741761595705,0.412773735926445,0,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.324016022465404,0,0,0.134864346384821,0.247960367176008,1.04702376793612,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.405450430580328,0.616265742988964,0.77952493786677,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0.350630706544707,0.226730383615211,0.221985953374065,0.448569283047378,0.335769232728157,0.386379188064381,0.187682475451182,0.36630324853453,0.857473516316263,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0,0,0,0.512200817262403,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr15:102110934..102110960,+ | |short_description=p@chr15:102110934..102110960,+ | ||
}} | }} |
Latest revision as of 00:48, 5 August 2015
Short description: | p@chr15:102110934..102110960, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:102110934..102110960, + |
Coexpression cluster: | MCL_coexpression_mm9:762 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.12e-10 | 3 |
mesenchymal stem cell of the bone marrow | 1.12e-10 | 3 |
smooth muscle cell | 2.87e-10 | 3 |
vascular associated smooth muscle cell | 2.87e-10 | 3 |
aortic smooth muscle cell | 2.87e-10 | 3 |
smooth muscle myoblast | 2.87e-10 | 3 |
muscle precursor cell | 9.97e-09 | 6 |
muscle cell | 9.97e-09 | 6 |
myoblast | 9.97e-09 | 6 |
monopoietic cell | 4.92e-08 | 4 |
myeloid leukocyte | 4.92e-08 | 4 |
phagocyte | 4.92e-08 | 4 |
monocyte | 4.92e-08 | 4 |
macrophage | 4.92e-08 | 4 |
tissue-resident macrophage | 4.92e-08 | 4 |
macrophage dendritic cell progenitor | 4.92e-08 | 4 |
monoblast | 4.92e-08 | 4 |
promonocyte | 4.92e-08 | 4 |
central nervous system macrophage | 1.68e-07 | 2 |
microglial cell | 1.68e-07 | 2 |
mesodermal cell | 1.74e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.87e-10 | 3 |
blood vessel smooth muscle | 2.87e-10 | 3 |
arterial system smooth muscle | 2.87e-10 | 3 |
artery smooth muscle tissue | 2.87e-10 | 3 |
aorta smooth muscle tissue | 2.87e-10 | 3 |
musculoskeletal system | 1.85e-08 | 32 |
aorta | 8.41e-08 | 4 |
artery | 8.41e-08 | 4 |
systemic artery | 8.41e-08 | 4 |
arterial blood vessel | 8.41e-08 | 4 |
systemic arterial system | 8.41e-08 | 4 |
aortic system | 8.41e-08 | 4 |
arterial system | 8.41e-08 | 4 |
colon | 1.16e-07 | 2 |
large intestine | 1.16e-07 | 2 |
bone marrow | 6.06e-07 | 16 |