FFCP PHASE1:Mm9::chr1:155755629..155755633,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:155755629..155755633,+ | |||
|description=CAGE_peak_at_chr1:155755629..155755633,+ | |description=CAGE_peak_at_chr1:155755629..155755633,+ | ||
|id=chr1:155755629..155755633,+ | |id=chr1:155755629..155755633,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.06e-09!44;CL:0000133!2.06e-09!44;CL:0000117!2.52e-09!23;CL:0000337!2.52e-09!23;CL:0002319!4.18e-09!43;CL:0000055!2.30e-07!50 | |ontology_enrichment_celltype=CL:0000221!2.06e-09!44;CL:0000133!2.06e-09!44;CL:0000117!2.52e-09!23;CL:0000337!2.52e-09!23;CL:0002319!4.18e-09!43;CL:0000055!2.30e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.19e-14,6;CL:0000126,4.19e-14,6;CL:0000127,4.19e-14,6;CL:0002603,4.91e-11,2;CL:0002476,9.72e-11,2;CL:0002453,1.27e-10,8;CL:0002319,1.97e-10,43;CL:0000221,3.67e-10,44;CL:0000133,3.67e-10,44;CL:0000333,1.60e-08,10;CL:0000095,1.60e-08,10;CL:0000243,1.60e-08,10;CL:0000123,1.60e-08,10;CL:0000125,1.60e-08,10;CL:0000030,1.60e-08,10;CL:0000339,1.60e-08,10;CL:0002614,9.74e-08,3;CL:0000117,1.92e-07,23;CL:0000337,1.92e-07,23;CL:0002612,2.99e-07,3;CL:0002321,4.20e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!8.43e-08!12;UBERON:0003057!8.43e-08!12;UBERON:0004111!2.74e-07!122;UBERON:0000025!2.81e-07!114;UBERON:0004121!3.81e-07!102;UBERON:0000924!3.81e-07!102;UBERON:0006601!3.81e-07!102;UBERON:0002346!9.53e-07!71;UBERON:0003075!9.53e-07!71;UBERON:0007284!9.53e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,3.36e-10,12;UBERON:0003057,3.36e-10,12;UBERON:0001948,2.37e-09,5;UBERON:0002315,2.37e-09,5;UBERON:0002240,7.10e-08,6;UBERON:0005174,7.10e-08,6;UBERON:0001137,7.10e-08,6;UBERON:0002038,9.74e-08,3;UBERON:0009663,9.74e-08,3;UBERON:0009661,9.74e-08,3;UBERON:0000125,9.74e-08,3;UBERON:0002308,9.74e-08,3;UBERON:0002257,2.99e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.8343270329458,0.219686182734472,3.69416808241138,5.03951117851305,0,0,0,0,0.257259436035947,0,0,0.404632921719196,0,0,0,1.77858959222228,0,0,0,0,0.384218305321555,0.207379224616955,0.810035629990144,0.210324961351382,1.99955689082663,0.441737081903227,0.61245399607477,0.479227355091182,0,0,0.638436690425939,3.37934373163736,0.395658863190582,0.457438218012048,0,0,1.68828783009504,3.20876320331301,1.47314292736834,0.854230084794618,1.3047961207771,0.151452386666368,0.151143120213571,0,0,0,1.07940638327563,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,0,0.628340120440365,0,0,0,0,0.599162557619291,0,0,0,0.767146371990992,0,0,0.101839363850316,0.124406970610093,1.26361379216837,0,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0,0,1.01031551178845,0.538192240565737,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0.321101179975584,0.703270119553219,0.327869890753351,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0,0.523511883968059,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.350630706544707,0,0,0.269141569828427,0,0.19318959403219,0,0,0,0,0,0.920650473014354,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.8343270329458,0.219686182734472,3.69416808241138,5.03951117851305,0,0,0,0,0.257259436035947,0,0,0.404632921719196,0,0,0,1.77858959222228,0,0,0,0,0.384218305321555,0.207379224616955,0.810035629990144,0.210324961351382,1.99955689082663,0.441737081903227,0.61245399607477,0.479227355091182,0,0,0.638436690425939,3.37934373163736,0.395658863190582,0.457438218012048,0,0,1.68828783009504,3.20876320331301,1.47314292736834,0.854230084794618,1.3047961207771,0.151452386666368,0.151143120213571,0,0,0,1.07940638327563,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.376999773989026,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,1.86391761218122,0,0.628340120440365,0,0,0,0,0.599162557619291,0,0,0,0.767146371990992,0,0,0.101839363850316,0.124406970610093,1.26361379216837,0,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0,0,1.01031551178845,0.538192240565737,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0.321101179975584,0.703270119553219,0.327869890753351,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0,0.523511883968059,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.350630706544707,0,0,0.269141569828427,0,0.19318959403219,0,0,0,0,0,0.920650473014354,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr1:155755629..155755633,+ | |short_description=p@chr1:155755629..155755633,+ | ||
}} | }} |
Latest revision as of 00:57, 5 August 2015
Short description: | p@chr1:155755629..155755633, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:155755629..155755633, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.19e-14 | 6 |
macroglial cell | 4.19e-14 | 6 |
astrocyte | 4.19e-14 | 6 |
astrocyte of the cerebellum | 4.91e-11 | 2 |
bone marrow macrophage | 9.72e-11 | 2 |
oligodendrocyte precursor cell | 1.27e-10 | 8 |
neural cell | 1.97e-10 | 43 |
ectodermal cell | 3.67e-10 | 44 |
neurectodermal cell | 3.67e-10 | 44 |
migratory neural crest cell | 1.60e-08 | 10 |
neuron associated cell | 1.60e-08 | 10 |
glial cell (sensu Vertebrata) | 1.60e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.60e-08 | 10 |
glial cell | 1.60e-08 | 10 |
glioblast | 1.60e-08 | 10 |
glioblast (sensu Vertebrata) | 1.60e-08 | 10 |
neuron of the substantia nigra | 9.74e-08 | 3 |
CNS neuron (sensu Vertebrata) | 1.92e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-07 | 23 |
neuron of the ventral spinal cord | 2.99e-07 | 3 |
embryonic cell | 4.20e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 3.36e-10 | 12 |
chordal neural plate | 3.36e-10 | 12 |
regional part of spinal cord | 2.37e-09 | 5 |
gray matter of spinal cord | 2.37e-09 | 5 |
spinal cord | 7.10e-08 | 6 |
dorsal region element | 7.10e-08 | 6 |
dorsum | 7.10e-08 | 6 |
substantia nigra | 9.74e-08 | 3 |
telencephalic nucleus | 9.74e-08 | 3 |
midbrain nucleus | 9.74e-08 | 3 |
neural nucleus | 9.74e-08 | 3 |
nucleus of brain | 9.74e-08 | 3 |
ventral horn of spinal cord | 2.99e-07 | 3 |