FFCP PHASE1:Mm9::chr9:46078347..46078361,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=111 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:46078347..46078361,+ | |||
|description=CAGE_peak_at_chr9:46078347..46078361,+ | |description=CAGE_peak_at_chr9:46078347..46078361,+ | ||
|id=chr9:46078347..46078361,+ | |id=chr9:46078347..46078361,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.05e-17!5;CL:0000417!1.05e-17!5;CL:0000668!1.05e-17!5;CL:0000412!1.05e-17!5;CL:0000182!1.05e-17!5;CL:0000414!3.81e-08!11 | |ontology_enrichment_celltype=CL:0000181!1.05e-17!5;CL:0000417!1.05e-17!5;CL:0000668!1.05e-17!5;CL:0000412!1.05e-17!5;CL:0000182!1.05e-17!5;CL:0000414!3.81e-08!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.92e-31,5;CL:0000223,3.51e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.45e-33!22;UBERON:0007499!2.45e-33!22;UBERON:0006925!2.45e-33!22;UBERON:0009497!2.45e-33!22;UBERON:0000015!2.45e-33!22;UBERON:0002423!2.45e-33!22;UBERON:0006235!2.45e-33!22;UBERON:0008835!2.45e-33!22;UBERON:0003894!2.45e-33!22;UBERON:0004161!2.45e-33!22;UBERON:0008836!2.45e-33!22;UBERON:0009854!8.02e-32!23;UBERON:0009856!8.02e-32!23;UBERON:0002365!3.75e-29!25;UBERON:0002330!3.75e-29!25;UBERON:0005256!2.46e-17!47;UBERON:0005172!1.49e-16!49;UBERON:0005173!1.49e-16!49;UBERON:0002417!1.49e-16!49;UBERON:0000916!1.49e-16!49;UBERON:0003914!9.59e-15!47;UBERON:0005057!1.87e-13!51;UBERON:0002368!3.49e-13!60;UBERON:0003929!2.37e-12!55;UBERON:0002530!5.01e-12!65;UBERON:0009569!8.13e-12!66;UBERON:0000949!1.13e-10!72;UBERON:0005177!2.74e-10!85;UBERON:0000490!5.30e-10!66;UBERON:0005911!1.72e-09!69;UBERON:0002405!2.49e-09!70;UBERON:0002100!1.19e-08!98;UBERON:0000466!4.60e-08!79;UBERON:0001041!6.29e-08!92;UBERON:0000077!2.03e-07!97 | |ontology_enrichment_uberon=UBERON:0002107!2.45e-33!22;UBERON:0007499!2.45e-33!22;UBERON:0006925!2.45e-33!22;UBERON:0009497!2.45e-33!22;UBERON:0000015!2.45e-33!22;UBERON:0002423!2.45e-33!22;UBERON:0006235!2.45e-33!22;UBERON:0008835!2.45e-33!22;UBERON:0003894!2.45e-33!22;UBERON:0004161!2.45e-33!22;UBERON:0008836!2.45e-33!22;UBERON:0009854!8.02e-32!23;UBERON:0009856!8.02e-32!23;UBERON:0002365!3.75e-29!25;UBERON:0002330!3.75e-29!25;UBERON:0005256!2.46e-17!47;UBERON:0005172!1.49e-16!49;UBERON:0005173!1.49e-16!49;UBERON:0002417!1.49e-16!49;UBERON:0000916!1.49e-16!49;UBERON:0003914!9.59e-15!47;UBERON:0005057!1.87e-13!51;UBERON:0002368!3.49e-13!60;UBERON:0003929!2.37e-12!55;UBERON:0002530!5.01e-12!65;UBERON:0009569!8.13e-12!66;UBERON:0000949!1.13e-10!72;UBERON:0005177!2.74e-10!85;UBERON:0000490!5.30e-10!66;UBERON:0005911!1.72e-09!69;UBERON:0002405!2.49e-09!70;UBERON:0002100!1.19e-08!98;UBERON:0000466!4.60e-08!79;UBERON:0001041!6.29e-08!92;UBERON:0000077!2.03e-07!97 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.38e-28,22;UBERON:0007499,3.38e-28,22;UBERON:0006925,3.38e-28,22;UBERON:0009497,3.38e-28,22;UBERON:0000015,3.38e-28,22;UBERON:0002423,3.38e-28,22;UBERON:0006235,3.38e-28,22;UBERON:0008835,3.38e-28,22;UBERON:0003894,3.38e-28,22;UBERON:0004161,3.38e-28,22;UBERON:0008836,3.38e-28,22;UBERON:0009854,5.71e-27,23;UBERON:0009856,5.71e-27,23;UBERON:0002365,8.28e-25,25;UBERON:0002330,8.28e-25,25;UBERON:0005256,1.02e-13,45;UBERON:0003914,3.98e-13,47;UBERON:0005172,1.40e-12,49;UBERON:0005173,1.40e-12,49;UBERON:0002417,1.40e-12,49;UBERON:0000916,1.40e-12,49;UBERON:0003929,3.51e-11,55;UBERON:0002368,3.16e-10,60;UBERON:0003104,4.70e-10,61;UBERON:0009142,4.70e-10,61;UBERON:0002530,2.04e-09,65;UBERON:0000490,2.87e-09,66;UBERON:0009569,2.87e-09,66;UBERON:0005911,7.49e-09,69;UBERON:0000949,1.81e-08,72;UBERON:0005177,1.10e-07,79;UBERON:0001041,1.38e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,8.15965600449301,2.15881276655127,3.24888208723835,6.2723764193627,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,15.0785760900783,0,5.75072826109418,3.34926852901653,0,0.505157755894224,0.717589654087649,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,8.15965600449301,2.15881276655127,3.24888208723835,6.2723764193627,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,15.0785760900783,0,5.75072826109418,3.34926852901653,0,0.505157755894224,0.717589654087649,4.3419916922703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:46078347..46078361,+ | |short_description=p@chr9:46078347..46078361,+ | ||
}} | }} |
Latest revision as of 05:46, 5 August 2015
Short description: | p@chr9:46078347..46078361, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46078347..46078361, + |
Coexpression cluster: | MCL_coexpression_mm9:111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.92e-31 | 5 |
endodermal cell | 3.51e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 3.38e-28 | 22 |
epithelial sac | 3.38e-28 | 22 |
digestive gland | 3.38e-28 | 22 |
epithelium of foregut-midgut junction | 3.38e-28 | 22 |
anatomical boundary | 3.38e-28 | 22 |
hepatobiliary system | 3.38e-28 | 22 |
foregut-midgut junction | 3.38e-28 | 22 |
hepatic diverticulum | 3.38e-28 | 22 |
liver primordium | 3.38e-28 | 22 |
septum transversum | 3.38e-28 | 22 |
liver bud | 3.38e-28 | 22 |
digestive tract diverticulum | 5.71e-27 | 23 |
sac | 5.71e-27 | 23 |
exocrine gland | 8.28e-25 | 25 |
exocrine system | 8.28e-25 | 25 |
trunk mesenchyme | 1.02e-13 | 45 |
epithelial tube | 3.98e-13 | 47 |
abdomen element | 1.40e-12 | 49 |
abdominal segment element | 1.40e-12 | 49 |
abdominal segment of trunk | 1.40e-12 | 49 |
abdomen | 1.40e-12 | 49 |
gut epithelium | 3.51e-11 | 55 |
endocrine gland | 3.16e-10 | 60 |
mesenchyme | 4.70e-10 | 61 |
entire embryonic mesenchyme | 4.70e-10 | 61 |
gland | 2.04e-09 | 65 |
unilaminar epithelium | 2.87e-09 | 66 |
subdivision of trunk | 2.87e-09 | 66 |
endo-epithelium | 7.49e-09 | 69 |
endocrine system | 1.81e-08 | 72 |
trunk region element | 1.10e-07 | 79 |
foregut | 1.38e-07 | 80 |