FFCP PHASE1:Mm9::chr7:53358071..53358073,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=331|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:53358071..53358073,+|id=chr7:53358071..53358073,+|ontology_enrichment_celltype=CL:0002250!3.58e-11!3;CL:0002563!9.79e-10!9;CL:0002251!9.79e-10!9|ontology_enrichment_celltype_v019_2=CL:0000239,8.02e-16,6;CL:0000677,8.02e-16,6;CL:0000584,8.02e-16,6;CL:0000075,8.67e-14,7;CL:0002563,4.56e-11,9;CL:0002251,4.56e-11,9;CL:0002076,3.18e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!9.79e-10!9;UBERON:0004808!9.79e-10!9;UBERON:0001277!9.79e-10!9;UBERON:0000344!6.59e-08!15;UBERON:0000485!6.72e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.56e-11,9;UBERON:0004808,4.56e-11,9;UBERON:0001277,4.56e-11,9;UBERON:0000485,2.51e-09,11;UBERON:0001242,4.08e-08,13;UBERON:0001262,4.08e-08,13;UBERON:0004786,4.08e-08,13;UBERON:0000344,3.18e-07,15|phase1_expression=0,0,0,0,0,2.01455126294268,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0.347648640384553,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:53358071..53358073,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=331 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:53358071..53358073,+ | |||
|description=CAGE_peak_at_chr7:53358071..53358073,+ | |||
|id=chr7:53358071..53358073,+ | |||
|ontology_enrichment_celltype=CL:0002250!3.58e-11!3;CL:0002563!9.79e-10!9;CL:0002251!9.79e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.02e-16,6;CL:0000677,8.02e-16,6;CL:0000584,8.02e-16,6;CL:0000075,8.67e-14,7;CL:0002563,4.56e-11,9;CL:0002251,4.56e-11,9;CL:0002076,3.18e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!9.79e-10!9;UBERON:0004808!9.79e-10!9;UBERON:0001277!9.79e-10!9;UBERON:0000344!6.59e-08!15;UBERON:0000485!6.72e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.56e-11,9;UBERON:0004808,4.56e-11,9;UBERON:0001277,4.56e-11,9;UBERON:0000485,2.51e-09,11;UBERON:0001242,4.08e-08,13;UBERON:0001262,4.08e-08,13;UBERON:0004786,4.08e-08,13;UBERON:0000344,3.18e-07,15 | |||
|phase1_expression=0,0,0,0,0,2.01455126294268,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.319984845586813,0,0,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0.347648640384553,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:53358071..53358073,+ | |||
}} |
Latest revision as of 09:31, 5 August 2015
Short description: | p@chr7:53358071..53358073, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:53358071..53358073, + |
Coexpression cluster: | MCL_coexpression_mm9:331 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.02e-16 | 6 |
gut absorptive cell | 8.02e-16 | 6 |
enterocyte | 8.02e-16 | 6 |
columnar/cuboidal epithelial cell | 8.67e-14 | 7 |
intestinal epithelial cell | 4.56e-11 | 9 |
epithelial cell of alimentary canal | 4.56e-11 | 9 |
endo-epithelial cell | 3.18e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.56e-11 | 9 |
gastrointestinal system epithelium | 4.56e-11 | 9 |
intestinal epithelium | 4.56e-11 | 9 |
simple columnar epithelium | 2.51e-09 | 11 |
intestinal mucosa | 4.08e-08 | 13 |
wall of intestine | 4.08e-08 | 13 |
gastrointestinal system mucosa | 4.08e-08 | 13 |
mucosa | 3.18e-07 | 15 |