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FFCP PHASE1:Mm9::chr13:105844519..105844642,-: Difference between revisions

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{{FFCP|EntrezGene=52882|HGNC=|MCL_coexpression_id=1|UniProt=Q8BQP9|association_with_transcript=367bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end|description=CAGE_peak_1_at_Rgs7bp_5end|id=chr13:105844519..105844642,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.79e-14!52;UBERON:0005068!2.79e-14!52;UBERON:0006241!2.79e-14!52;UBERON:0007135!2.79e-14!52;UBERON:0000955!1.43e-13!50;UBERON:0006238!1.43e-13!50;UBERON:0002616!5.11e-13!49;UBERON:0000033!1.42e-12!63;UBERON:0001017!2.06e-12!73;UBERON:0005743!2.06e-12!73;UBERON:0002346!2.26e-12!71;UBERON:0003075!2.26e-12!71;UBERON:0007284!2.26e-12!71;UBERON:0000073!4.32e-12!75;UBERON:0001016!4.32e-12!75;UBERON:0002020!5.03e-10!34;UBERON:0003080!8.94e-10!40;UBERON:0003056!1.37e-09!49;UBERON:0000025!2.34e-09!114;UBERON:0004121!2.45e-09!102;UBERON:0000924!2.45e-09!102;UBERON:0006601!2.45e-09!102;UBERON:0002780!2.87e-09!39;UBERON:0001890!2.87e-09!39;UBERON:0006240!2.87e-09!39;UBERON:0004111!1.02e-08!122;UBERON:0002021!3.90e-08!10;UBERON:0000411!3.90e-08!10;UBERON:0001950!3.90e-08!10;UBERON:0002791!9.26e-08!29;UBERON:0003528!9.26e-08!29;UBERON:0001893!9.26e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.47e-14,54;UBERON:0001049,6.16e-13,52;UBERON:0005068,6.16e-13,52;UBERON:0006241,6.16e-13,52;UBERON:0007135,6.16e-13,52;UBERON:0010314,2.28e-12,92;UBERON:0002346,1.26e-11,64;UBERON:0003075,1.26e-11,64;UBERON:0007284,1.26e-11,64;UBERON:0001017,2.35e-11,73;UBERON:0001016,6.73e-11,75;UBERON:0000955,1.95e-10,47;UBERON:0006238,1.95e-10,47;UBERON:0002616,6.90e-10,46;UBERON:0002020,1.84e-09,34;UBERON:0010371,4.09e-09,73;UBERON:0002021,5.65e-09,10;UBERON:0000411,5.65e-09,10;UBERON:0001950,5.65e-09,10;UBERON:0003080,8.36e-09,40;UBERON:0002780,2.81e-08,39;UBERON:0001890,2.81e-08,39;UBERON:0006240,2.81e-08,39;UBERON:0004121,5.49e-08,95;UBERON:0000924,5.49e-08,95;UBERON:0006601,5.49e-08,95;UBERON:0003056,6.35e-08,49;UBERON:0003528,4.74e-07,29;UBERON:0002791,4.74e-07,29;UBERON:0001893,4.74e-07,29|phase1_expression=1.92178616525753,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,7.90902598404949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.439372365468944,0.388859798148567,1.53985063787899,0,0,0,0,0.257259436035947,0.286533439938757,0,0.809265843438391,2.64495489636016,1.26766280701236,0.338844532069132,1.77858959222228,0,0,0,0.599200221036809,0,1.24427534770173,0.810035629990144,0.841299845405528,5.14171771926846,5.74258206474195,0.979926393719632,0.958454710182364,0,27.5289702498472,43.1583202727934,38.5552398473171,1.18697658957174,1.00636407962651,2.08365348222704,13.4007839520663,12.9435400307286,14.3630352910202,7.66034322231536,5.97961059356232,3.91438836233131,0.530083353332288,1.28471652181535,4.34796733052517,1.72084775396277,0,0,0,0,1.82577746171277,0,0,0,0.422530259330042,0,0,0,0,0,0,1.7127581957859,0,0.445326417194474,1.04091196059682,0.608930956624282,0.922461989024234,0.60289056221049,1.76383060703557,0.502666365318702,0.247194967734374,6.65157041831594,0,1.45590164952668,0.220841518460394,0.484875253135222,3.72783522436244,42.1604347696628,44.4027018444525,1.02182822083437,0.479260498023681,0,0.254140454146129,18.4242486467932,67.7100892171567,4.64921102817598,48.8446339740297,56.2574006126727,37.6096360652804,39.2623856623973,2.64782346010822,0.746441823660558,0.252722758433675,1.47309299120532,0.780722657776222,0.919608417733892,1.26043490863744,1.9591626318643,1.90502197623718,0.896796041993948,1.49922759295566,4.9153640440413,0,0.378212160335639,1.58356011747554,1.53437012699302,2.78047249225598,2.78601733217733,3.70407845534298,0.199034266818493,0,0.257347907114715,0.284163499395593,3.52113813310353,3.04883877975425,3.6012412292203,3.55117103377815,2.75469924446365,3.23960937063494,2.79040733700489,3.75582761959467,3.85325629811659,1.81015834904829,3.2833492815819,3.32382119138008,1.02339991197733,2.19550115291051,1.61047702512446,43.7403093013385,4.21908910755066,0,1.58670339998127,1.2797295032114,0.696710015581316,2.31961430379768,2.8235693447268,1.77902435075896,2.28270751335071,1.42358718463353,1.4822905925161,3.01602250560323,2.18852119245266,3.11942539390592,3.59527763461689,2.16138049874694,1.7922714592893,0.569003702859245,1.71372768914593,1.1270773567308,1.4255592949172,2.13347735884388,1.96380295692892,1.70738650235495,1.32849133181642,0.31399745568275,0.493588655687202,1.1858105083486,0,0.393117990226406,0.224862112384854,0.405720242777006,0.964708639009667,0.763877555344259,0.575392274901621,0.486405680325106,0.823684239564244,2.87536413054709,0.744281895337007,0.936113019343682,1.01031551178845,0.717589654087649,0.482443521363367,0.739012760666419,0.947457058852424,0.977789858652155,0.848725428875941,0.704070744865506,0.670025029767263,0.952174563544055,0.390267295715598,1.26108115284953,1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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:52882
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q8BQP9
|association_with_transcript=367bp_to_ENSMUST00000063551,NM_029879,uc007rtp.1_5end
|cluster_id=chr13:105844519..105844642,-
|description=CAGE_peak_1_at_Rgs7bp_5end
|id=chr13:105844519..105844642,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.47e-14,54;UBERON:0001049,6.16e-13,52;UBERON:0005068,6.16e-13,52;UBERON:0006241,6.16e-13,52;UBERON:0007135,6.16e-13,52;UBERON:0010314,2.28e-12,92;UBERON:0002346,1.26e-11,64;UBERON:0003075,1.26e-11,64;UBERON:0007284,1.26e-11,64;UBERON:0001017,2.35e-11,73;UBERON:0001016,6.73e-11,75;UBERON:0000955,1.95e-10,47;UBERON:0006238,1.95e-10,47;UBERON:0002616,6.90e-10,46;UBERON:0002020,1.84e-09,34;UBERON:0010371,4.09e-09,73;UBERON:0002021,5.65e-09,10;UBERON:0000411,5.65e-09,10;UBERON:0001950,5.65e-09,10;UBERON:0003080,8.36e-09,40;UBERON:0002780,2.81e-08,39;UBERON:0001890,2.81e-08,39;UBERON:0006240,2.81e-08,39;UBERON:0004121,5.49e-08,95;UBERON:0000924,5.49e-08,95;UBERON:0006601,5.49e-08,95;UBERON:0003056,6.35e-08,49;UBERON:0003528,4.74e-07,29;UBERON:0002791,4.74e-07,29;UBERON:0001893,4.74e-07,29
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,7.90902598404949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0.439372365468944,0.388859798148567,1.53985063787899,0,0,0,0,0.257259436035947,0.286533439938757,0,0.809265843438391,2.64495489636016,1.26766280701236,0.338844532069132,1.77858959222228,0,0,0,0.599200221036809,0,1.24427534770173,0.810035629990144,0.841299845405528,5.14171771926846,5.74258206474195,0.979926393719632,0.958454710182364,0,27.5289702498472,43.1583202727934,38.5552398473171,1.18697658957174,1.00636407962651,2.08365348222704,13.4007839520663,12.9435400307286,14.3630352910202,7.66034322231536,5.97961059356232,3.91438836233131,0.530083353332288,1.28471652181535,4.34796733052517,1.72084775396277,0,0,0,0,1.82577746171277,0,0,0,0.422530259330042,0,0,0,0,0,0,1.7127581957859,0,0.445326417194474,1.04091196059682,0.608930956624282,0.922461989024234,0.60289056221049,1.76383060703557,0.502666365318702,0.247194967734374,6.65157041831594,0,1.45590164952668,0.220841518460394,0.484875253135222,3.72783522436244,42.1604347696628,44.4027018444525,1.02182822083437,0.479260498023681,0,0.254140454146129,18.4242486467932,67.7100892171567,4.64921102817598,48.8446339740297,56.2574006126727,37.6096360652804,39.2623856623973,2.64782346010822,0.746441823660558,0.252722758433675,1.47309299120532,0.780722657776222,0.919608417733892,1.26043490863744,1.9591626318643,1.90502197623718,0.896796041993948,1.49922759295566,4.9153640440413,0,0.378212160335639,1.58356011747554,1.53437012699302,2.78047249225598,2.78601733217733,3.70407845534298,0.199034266818493,0,0.257347907114715,0.284163499395593,3.52113813310353,3.04883877975425,3.6012412292203,3.55117103377815,2.75469924446365,3.23960937063494,2.79040733700489,3.75582761959467,3.85325629811659,1.81015834904829,3.2833492815819,3.32382119138008,1.02339991197733,2.19550115291051,1.61047702512446,43.7403093013385,4.21908910755066,0,1.58670339998127,1.2797295032114,0.696710015581316,2.31961430379768,2.8235693447268,1.77902435075896,2.28270751335071,1.42358718463353,1.4822905925161,3.01602250560323,2.18852119245266,3.11942539390592,3.59527763461689,2.16138049874694,1.7922714592893,0.569003702859245,1.71372768914593,1.1270773567308,1.4255592949172,2.13347735884388,1.96380295692892,1.70738650235495,1.32849133181642,0.31399745568275,0.493588655687202,1.1858105083486,0,0.393117990226406,0.224862112384854,0.405720242777006,0.964708639009667,0.763877555344259,0.575392274901621,0.486405680325106,0.823684239564244,2.87536413054709,0.744281895337007,0.936113019343682,1.01031551178845,0.717589654087649,0.482443521363367,0.739012760666419,0.947457058852424,0.977789858652155,0.848725428875941,0.704070744865506,0.670025029767263,0.952174563544055,0.390267295715598,1.26108115284953,1.99318220683897,2.71073106717728,1.14704320301017,2.24490476425664,0.578596234326046,0,0,0.491764273019036,0,16.215609588767,13.0104972117346,0,1.76729649043061,0.631016438832513,3.12350995437311,1.07711698866399,0,0,0.283076530788832,2.83367491172426,1.16902343164525,0.395287777946524,19.921921618152,2.41298144854057,1.95872164033981,1.62886959353576,7.4236555337641,0,0.242780636154981,1.81394134178851,1.50884063804718,0.885905678642318,0.922305443831782,2.32585463851399,1.81766864738753,1.78248689192361,1.8962205476149,1.05418608574999,0,3.74483566329167,0.540183282093931,0.388076051348264,0.643011105094777,2.12808280370728,2.85390108163313,6.2528627828806,5.17590413494819,0,0,0,0.65954501176592,1.61464426695906,1.14594557363496,0.954978752025092,0.656563598980245,1.45740418314925,17.0591277849669,0.512612642393558,1.03193433981611,0.555583582109135,0.941842285023455,0.683471138605126,0,1.5298058699447,0.839708713941948,1.52019971184866,0,0,1.01659733563424,0.972048067396211,1.88179466413022,2.62035076495413,2.02296519577231,3.2234847732881,3.40282724579238,1.94422459937689,0,0,0.299033092087958,0.827292452285488,0.777804753376191,0.774958940866387,1.35164900392623,0.58678619322877,1.0416350787516,0.524296722128554,0.241584120826006,0,0.316011120628178,1.82452693761148,0.616265742988964,0.389762468933385,0.358053391334963,0.79472541912506,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,2.94749498699775,0,0,0,9.46629010757733,2.064507229963,2.38097111547445,0.428736758158132,0.501572104035363,54.7809287338555,59.842280745933,52.1334917229851,51.0403951560752,49.3259414234862,55.8991484068378,50.6266875173854,46.3830839320947,49.3925225792783,45.0451471224083,0.207574695168353,1.19707462020309,1.36586884603307,3.8897074730927,2.09613162627982,2.38996560985018,1.77797382241292,2.06035057238894,2.56735367673452,4.29585259998456,3.8021894983536,3.01802146217722,1.77918864192777,2.56100609619477,2.46972516509137,4.76293691283074,2.54945517078682,3.8581844092741,2.88460130562315,2.50238164228475,2.05721551431249,3.72699192934609,3.57654284920981,3.0522747492789,2.72917203204459,2.62305284464197,3.29270351170991,2.89376682581627,2.03706170768793,2.24456908663095,3.55905054372522,2.1670986122624,4.09231043169689,2.47898945897546,2.50778594275484,3.2475375131933,3.04111090979031,3.43793686477277,2.10417165275728,1.32354851471709,2.78241402744506
|short_description=p1@Rgs7bp
}}

Revision as of 13:47, 5 August 2015

Short description:p1@Rgs7bp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rgs7bp_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 367bp_to_ENSMUST00000063551, NM_029879, uc007rtp.1_5end
EntrezGene:52882
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rgs7bp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.16
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B242.16
cerebellum, neonate N30.CNhs11135.1395-42I244.40
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A418.42
corpus striatum, adult.CNhs10487.19-21D867.71
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D548.84
cortex, neonate N30.CNhs11107.1392-42F256.26
diencephalon, adult.CNhs10482.20-12F237.61
diencephalon, neonate N30.CNhs11201.1388-42B239.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G13.32
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E843.74
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.22
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I919.92
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A154.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A259.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A352.13
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A449.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A555.90
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A650.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A746.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.05
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.47e-1454
neural tube6.16e-1352
neural rod6.16e-1352
future spinal cord6.16e-1352
neural keel6.16e-1352
structure with developmental contribution from neural crest2.28e-1292
neurectoderm1.26e-1164
neural plate1.26e-1164
presumptive neural plate1.26e-1164
central nervous system2.35e-1173
nervous system6.73e-1175
brain1.95e-1047
future brain1.95e-1047
regional part of brain6.90e-1046
gray matter1.84e-0934
ecto-epithelium4.09e-0973
occipital lobe5.65e-0910
visual cortex5.65e-0910
neocortex5.65e-0910
anterior neural tube8.36e-0940
regional part of forebrain2.81e-0839
forebrain2.81e-0839
future forebrain2.81e-0839
ectoderm-derived structure5.49e-0895
ectoderm5.49e-0895
presumptive ectoderm5.49e-0895
pre-chordal neural plate6.35e-0849
brain grey matter4.74e-0729
regional part of telencephalon4.74e-0729
telencephalon4.74e-0729
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