FFCP PHASE1:Mm9::chr13:109288835..109288859,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:109288835..109288859,+|id=chr13:109288835..109288859,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,1.73e-07,9;CL:0002251,1.73e-07,9;CL:0000075,7.51e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.44e-16!43;UBERON:0005409!4.87e-15!59;UBERON:0000344!3.20e-08!15;UBERON:0001242!3.49e-07!13;UBERON:0000060!3.49e-07!13;UBERON:0001262!3.49e-07!13;UBERON:0004786!3.49e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.11e-18,31;UBERON:0005409,4.94e-17,47;UBERON:0000344,3.33e-10,15;UBERON:0001242,7.34e-09,13;UBERON:0001262,7.34e-09,13;UBERON:0004786,7.34e-09,13;UBERON:0000485,5.06e-08,11;UBERON:0003350,1.73e-07,9;UBERON:0004808,1.73e-07,9;UBERON:0001277,1.73e-07,9|phase1_expression=1.60148847104794,8.72438519098403,10.0099832665698,22.3823516367054,23.041203577532,11.4157904900085,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,5.91971964335605,7.57050627521661,10.3361753540704,12.0613358924541,11.8509177977239,2.09025761402011,1.00812051903972,3.76941868114018,0,0,0,3.17736781726402,1.49611180822643,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0,1.12552522006336,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0.579728977403356,0,0,0,0,0,1.82577746171277,0,0,0,2.67602497575693,0,0,0,0.216491041011214,0.253359865475099,0,3.31133251185274,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0,0,0.125666591329675,0,0.578397427679647,0,0.647067399789637,0.662524555381181,1.93950101254089,5.59175283654366,0.585561594023094,0,5.62005521458901,0,0,0,0.299581278809645,0,0.125654352112864,2.78118912307642,1.79000820131231,0.62336413367868,0.324482526135515,0.81471491080253,5.97153458928446,22.2396027421634,11.1534183619831,0.130120442962704,0.229902104433473,0.360124259610698,0.90422890701429,0.612328492361951,1.2811372028485,0.562210347358373,8.2785078636485,0,0,0.527853372491847,0,1.66828349535359,2.78601733217733,3.49829631893504,0.199034266818493,0,0,0.284163499395593,0,0,0.36012412292203,0.710234206755631,1.77087808572663,0.925602677324269,0,1.3413670069981,0.817357396570186,1.48103864922132,2.29834449710733,0.648550476366846,0.877199924551994,0.439100230582101,0.134206418760372,0.210289948564127,0,6.60837565967596,5.55346189993443,0.639864751605702,0.928946687441754,4.89696353023955,12.9077455758939,9.33987784148455,7.03834816616469,8.54152310780121,3.95277491337626,7.03738584640755,9.94782360205754,8.77338392036041,8.08937467788799,8.21324589523838,11.3510525754989,0,0.228497025219458,0,0.203651327845314,0.775809948670503,0.701358198903186,3.73095569033118,3.69025369949005,4.86696056308262,2.71473760627961,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,5.17308932466493,0.37898282354097,0.162964976442026,0.169745085775188,0,0.670025029767263,0,0.195133647857799,0.788175720530955,0.44292937929755,0.159454768657487,1.80249646187312,1.72684981865896,2.16973587872267,0,0,16.7199852826472,44.7017529013667,1.44495530989013,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.890328018336276,3.09485222771795,1.31976098378028,1.32745138339963,0,0.302323556964751,0.377210159511796,0.590603785761546,2.15204603560749,3.6179961043551,4.72593848320757,5.34746067577082,1.8962205476149,2.10837217149998,1.03135543248187,0.680879211507576,0.18006109403131,0,0.428674070063185,0.354680467284547,0,0.493647061806363,0.304464949114599,0.469343416127421,0,14.3343458735725,2.63818004706368,0.645857706783622,1.80938774784468,2.38744688006273,2.46211349617592,11.3677526285642,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,4.77335309007557,0,0.609958401380546,1.62008011232702,2.50905955217362,7.42432716737004,12.2726555210187,14.4643547519338,14.9200886930897,2.98114438571124,40.3870553506502,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,1.0416350787516,2.30690557736564,0.724752362478018,0.288030006257865,0,0.405450430580328,1.1298205288131,0.25984164595559,0.716106782669926,0,0.480781798079875,0.590758108698309,0.403865799792591,0.228620419965,0.302478555410522,0.487289403698762,0.288635524920988,0.233753804363138,7.70883304291719,0,0,0,0.772758376128762,0.187682475451182,1.28206136987086,0.214368379079066,23.0723167856267,3.3885110557024,1.38097570952153,3.43737308063638,2.23409137046794,4.11049511862385,3.0215755895588,2.02506750069542,1.35096360967266,0.453142408984205,4.14208249401456,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0,2.44471400581777,1.23621034343337,2.24643446714271,1.76888048234658,1.77435509923168,1.50901073108861,1.03005658216871,1.72867911493147,1.49332219284595,0.952587382566147,1.15884325944855,0.964546102318525,1.64834360321323,1.76638704161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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:109288835..109288859,+ | |||
|description=CAGE_peak_at_chr13:109288835..109288859,+ | |||
|id=chr13:109288835..109288859,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.73e-07,9;CL:0002251,1.73e-07,9;CL:0000075,7.51e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.44e-16!43;UBERON:0005409!4.87e-15!59;UBERON:0000344!3.20e-08!15;UBERON:0001242!3.49e-07!13;UBERON:0000060!3.49e-07!13;UBERON:0001262!3.49e-07!13;UBERON:0004786!3.49e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.11e-18,31;UBERON:0005409,4.94e-17,47;UBERON:0000344,3.33e-10,15;UBERON:0001242,7.34e-09,13;UBERON:0001262,7.34e-09,13;UBERON:0004786,7.34e-09,13;UBERON:0000485,5.06e-08,11;UBERON:0003350,1.73e-07,9;UBERON:0004808,1.73e-07,9;UBERON:0001277,1.73e-07,9 | |||
|phase1_expression=1.60148847104794,8.72438519098403,10.0099832665698,22.3823516367054,23.041203577532,11.4157904900085,9.81173090501208,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,5.91971964335605,7.57050627521661,10.3361753540704,12.0613358924541,11.8509177977239,2.09025761402011,1.00812051903972,3.76941868114018,0,0,0,3.17736781726402,1.49611180822643,4.69589519403449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0,1.12552522006336,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,0,0,0.579728977403356,0,0,0,0,0,1.82577746171277,0,0,0,2.67602497575693,0,0,0,0.216491041011214,0.253359865475099,0,3.31133251185274,0,0,0.346970653532272,0.304465478312141,0.461230994512117,0,0,0.125666591329675,0,0.578397427679647,0,0.647067399789637,0.662524555381181,1.93950101254089,5.59175283654366,0.585561594023094,0,5.62005521458901,0,0,0,0.299581278809645,0,0.125654352112864,2.78118912307642,1.79000820131231,0.62336413367868,0.324482526135515,0.81471491080253,5.97153458928446,22.2396027421634,11.1534183619831,0.130120442962704,0.229902104433473,0.360124259610698,0.90422890701429,0.612328492361951,1.2811372028485,0.562210347358373,8.2785078636485,0,0,0.527853372491847,0,1.66828349535359,2.78601733217733,3.49829631893504,0.199034266818493,0,0,0.284163499395593,0,0,0.36012412292203,0.710234206755631,1.77087808572663,0.925602677324269,0,1.3413670069981,0.817357396570186,1.48103864922132,2.29834449710733,0.648550476366846,0.877199924551994,0.439100230582101,0.134206418760372,0.210289948564127,0,6.60837565967596,5.55346189993443,0.639864751605702,0.928946687441754,4.89696353023955,12.9077455758939,9.33987784148455,7.03834816616469,8.54152310780121,3.95277491337626,7.03738584640755,9.94782360205754,8.77338392036041,8.08937467788799,8.21324589523838,11.3510525754989,0,0.228497025219458,0,0.203651327845314,0.775809948670503,0.701358198903186,3.73095569033118,3.69025369949005,4.86696056308262,2.71473760627961,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,5.17308932466493,0.37898282354097,0.162964976442026,0.169745085775188,0,0.670025029767263,0,0.195133647857799,0.788175720530955,0.44292937929755,0.159454768657487,1.80249646187312,1.72684981865896,2.16973587872267,0,0,16.7199852826472,44.7017529013667,1.44495530989013,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.890328018336276,3.09485222771795,1.31976098378028,1.32745138339963,0,0.302323556964751,0.377210159511796,0.590603785761546,2.15204603560749,3.6179961043551,4.72593848320757,5.34746067577082,1.8962205476149,2.10837217149998,1.03135543248187,0.680879211507576,0.18006109403131,0,0.428674070063185,0.354680467284547,0,0.493647061806363,0.304464949114599,0.469343416127421,0,14.3343458735725,2.63818004706368,0.645857706783622,1.80938774784468,2.38744688006273,2.46211349617592,11.3677526285642,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,4.77335309007557,0,0.609958401380546,1.62008011232702,2.50905955217362,7.42432716737004,12.2726555210187,14.4643547519338,14.9200886930897,2.98114438571124,40.3870553506502,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0,1.0416350787516,2.30690557736564,0.724752362478018,0.288030006257865,0,0.405450430580328,1.1298205288131,0.25984164595559,0.716106782669926,0,0.480781798079875,0.590758108698309,0.403865799792591,0.228620419965,0.302478555410522,0.487289403698762,0.288635524920988,0.233753804363138,7.70883304291719,0,0,0,0.772758376128762,0.187682475451182,1.28206136987086,0.214368379079066,23.0723167856267,3.3885110557024,1.38097570952153,3.43737308063638,2.23409137046794,4.11049511862385,3.0215755895588,2.02506750069542,1.35096360967266,0.453142408984205,4.14208249401456,0,0.399024873401031,0.341467211508268,0.243106717068294,0,0,2.44471400581777,1.23621034343337,2.24643446714271,1.76888048234658,1.77435509923168,1.50901073108861,1.03005658216871,1.72867911493147,1.49332219284595,0.952587382566147,1.15884325944855,0.964546102318525,1.64834360321323,1.76638704161277,1.37147700954166,1.59728225543404,1.1921809497366,1.59881058295561,1.41164070622996,2.19997980518359,2.37806364734604,1.57841826862706,1.7654534799962,2.24456908663095,1.18635018124174,1.87158516513571,1.63692417267876,1.23949472948773,0.964533054905707,0.749431733813838,1.87145286756327,1.50409737833809,1.3390183244819,1.54413993383661,1.85494268496337 | |||
|short_description=p@chr13:109288835..109288859,+ | |||
}} |
Latest revision as of 14:11, 5 August 2015
Short description: | p@chr13:109288835..109288859, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:109288835..109288859, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.73e-07 | 9 |
epithelial cell of alimentary canal | 1.73e-07 | 9 |
columnar/cuboidal epithelial cell | 7.51e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.11e-18 | 31 |
gastrointestinal system | 4.94e-17 | 47 |
mucosa | 3.33e-10 | 15 |
intestinal mucosa | 7.34e-09 | 13 |
wall of intestine | 7.34e-09 | 13 |
gastrointestinal system mucosa | 7.34e-09 | 13 |
simple columnar epithelium | 5.06e-08 | 11 |
epithelium of mucosa | 1.73e-07 | 9 |
gastrointestinal system epithelium | 1.73e-07 | 9 |
intestinal epithelium | 1.73e-07 | 9 |