FFCP PHASE1:Mm9::chr18:21251793..21251827,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:21251793..21251827,+ to FFCP PHASE1:Mm9::chr18:21251793..21251827,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:21251793..21251827,+ | |||
|description=CAGE_peak_at_chr18:21251793..21251827,+ | |||
|id=chr18:21251793..21251827,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.44e-12!6;CL:0000677!1.44e-12!6;CL:0000212!1.44e-12!6;CL:0000584!1.44e-12!6;CL:0000075!1.16e-10!7;CL:0002563!4.06e-08!9;CL:0002251!4.06e-08!9;CL:0000473!1.30e-07!3;CL:0000627!1.30e-07!3;CL:0000682!1.30e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.67e-14,3;CL:0000239,2.77e-07,6;CL:0000677,2.77e-07,6;CL:0000584,2.77e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.61e-20!43;UBERON:0000344!1.04e-19!15;UBERON:0005409!1.04e-17!59;UBERON:0001242!6.93e-16!13;UBERON:0000060!6.93e-16!13;UBERON:0001262!6.93e-16!13;UBERON:0004786!6.93e-16!13;UBERON:0004923!3.18e-11!24;UBERON:0000331!3.81e-08!3;UBERON:0002116!3.81e-08!3;UBERON:0001204!3.81e-08!3;UBERON:0001168!3.81e-08!3;UBERON:0003350!4.06e-08!9;UBERON:0004808!4.06e-08!9;UBERON:0001277!4.06e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.08e-28,31;UBERON:0000344,2.17e-24,15;UBERON:0002108,4.44e-20,4;UBERON:0005409,1.24e-17,47;UBERON:0001242,2.35e-17,13;UBERON:0001262,2.35e-17,13;UBERON:0004786,2.35e-17,13;UBERON:0000331,1.23e-15,3;UBERON:0002116,1.23e-15,3;UBERON:0001204,1.23e-15,3;UBERON:0001168,1.23e-15,3;UBERON:0004923,8.43e-15,24;UBERON:0001962,3.79e-10,2;UBERON:0001961,3.79e-10,2;UBERON:0001744,3.79e-10,2;UBERON:0001007,5.28e-08,116;UBERON:0001555,5.28e-08,116;UBERON:0007026,5.28e-08,116;UBERON:0004119,7.99e-08,118;UBERON:0000925,7.99e-08,118;UBERON:0006595,7.99e-08,118;UBERON:0002465,4.80e-07,3 | |||
|phase1_expression=0,2.09385244583617,0.454999239389536,1.81478526784098,1.50268718983904,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.06468352960453,2.29692785646008,1.7230479846363,2.15471232685889,16.1519906537918,3.52842181663903,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,1.85115396664481,0,0,0,0,0.444756087689741,1.52180500890047,2.84717436926707,0.988193728344065,0.502670417600539,0.596869416123452,0.779856348476481,0,1.51296634912286,3.18626037206988,0,0,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.09385244583617,0.454999239389536,1.81478526784098,1.50268718983904,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,2.06468352960453,2.29692785646008,1.7230479846363,2.15471232685889,16.1519906537918,3.52842181663903,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,1.85115396664481,0,0,0,0,0.444756087689741,1.52180500890047,2.84717436926707,0.988193728344065,0.502670417600539,0.596869416123452,0.779856348476481,0,1.51296634912286,3.18626037206988,0,0,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:21251793..21251827,+ | |||
}} | }} |
Latest revision as of 14:11, 5 August 2015
Short description: | p@chr18:21251793..21251827, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:21251793..21251827, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.67e-14 | 3 |
brush border epithelial cell | 2.77e-07 | 6 |
gut absorptive cell | 2.77e-07 | 6 |
enterocyte | 2.77e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.08e-28 | 31 |
mucosa | 2.17e-24 | 15 |
small intestine | 4.44e-20 | 4 |
gastrointestinal system | 1.24e-17 | 47 |
intestinal mucosa | 2.35e-17 | 13 |
wall of intestine | 2.35e-17 | 13 |
gastrointestinal system mucosa | 2.35e-17 | 13 |
ileal mucosa | 1.23e-15 | 3 |
ileum | 1.23e-15 | 3 |
mucosa of small intestine | 1.23e-15 | 3 |
wall of small intestine | 1.23e-15 | 3 |
organ component layer | 8.43e-15 | 24 |
gut-associated lymphoid tissue | 3.79e-10 | 2 |
mucosa-associated lymphoid tissue | 3.79e-10 | 2 |
lymphoid tissue | 3.79e-10 | 2 |
digestive system | 5.28e-08 | 116 |
digestive tract | 5.28e-08 | 116 |
primitive gut | 5.28e-08 | 116 |
endoderm-derived structure | 7.99e-08 | 118 |
endoderm | 7.99e-08 | 118 |
presumptive endoderm | 7.99e-08 | 118 |
lymphoid system | 4.80e-07 | 3 |