FFCP PHASE1:Mm9::chr11:11954302..11954310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1020 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000082868_5end | |||
|cluster_id=chr11:11954302..11954310,- | |||
|description=CAGE_peak_1_at_ENSMUST00000082868_5end | |||
|id=chr11:11954302..11954310,- | |||
|ontology_enrichment_celltype=CL:0000055!1.81e-25!50;CL:0002319!2.46e-25!43;CL:0000221!1.90e-24!44;CL:0000133!1.90e-24!44;CL:0000540!2.49e-22!33;CL:0000047!2.49e-22!33;CL:0000031!2.49e-22!33;CL:0000404!2.49e-22!33;CL:0000393!2.09e-21!39;CL:0000211!2.09e-21!39;CL:0000548!1.48e-20!115;CL:0000004!1.48e-20!115;CL:0000255!1.48e-20!115;CL:0000034!4.80e-20!97;CL:0000723!7.53e-20!91;CL:0000048!7.53e-20!91;CL:0002371!1.66e-19!118;CL:0000144!3.09e-19!121;CL:0000012!3.09e-19!121;CL:0000117!1.64e-18!23;CL:0000337!1.64e-18!23;CL:0002321!1.69e-18!70;CL:0000220!1.69e-18!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.26e-22,23;CL:0000337,5.26e-22,23;CL:0002319,1.24e-21,43;CL:0000221,5.30e-21,44;CL:0000133,5.30e-21,44;CL:0000540,3.40e-18,33;CL:0000047,3.40e-18,33;CL:0000031,3.40e-18,33;CL:0000404,3.40e-18,33;CL:0000723,9.22e-18,91;CL:0000048,9.22e-18,91;CL:0000393,2.77e-16,39;CL:0000211,2.77e-16,39;CL:0000034,3.60e-16,97;CL:0002321,5.77e-15,70;CL:0002609,1.15e-08,6;CL:0002194,1.43e-08,4;CL:0000766,1.43e-08,4;CL:0000234,1.43e-08,4;CL:0000576,1.43e-08,4;CL:0000235,1.43e-08,4;CL:0000864,1.43e-08,4;CL:0002009,1.43e-08,4;CL:0000040,1.43e-08,4;CL:0000559,1.43e-08,4;CL:0002613,2.51e-07,3;CL:0000839,4.00e-07,13;CL:0000120,8.97e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.60e-24!73;UBERON:0005743!1.60e-24!73;UBERON:0002020!2.14e-23!34;UBERON:0000073!2.14e-23!75;UBERON:0001016!2.14e-23!75;UBERON:0002791!3.57e-19!29;UBERON:0003528!3.57e-19!29;UBERON:0001893!3.57e-19!29;UBERON:0000956!5.87e-16!21;UBERON:0001869!5.87e-16!21;UBERON:0000203!5.87e-16!21;UBERON:0001049!1.49e-15!52;UBERON:0005068!1.49e-15!52;UBERON:0006241!1.49e-15!52;UBERON:0007135!1.49e-15!52;UBERON:0002619!2.45e-14!17;UBERON:0004121!1.63e-13!102;UBERON:0000924!1.63e-13!102;UBERON:0006601!1.63e-13!102;UBERON:0002616!4.18e-13!49;UBERON:0000955!1.24e-12!50;UBERON:0006238!1.24e-12!50;UBERON:0002780!6.73e-12!39;UBERON:0001890!6.73e-12!39;UBERON:0006240!6.73e-12!39;UBERON:0003080!2.20e-11!40;UBERON:0002346!7.27e-10!71;UBERON:0003075!7.27e-10!71;UBERON:0007284!7.27e-10!71;UBERON:0002021!9.46e-10!10;UBERON:0000411!9.46e-10!10;UBERON:0001950!9.46e-10!10;UBERON:0000033!5.56e-08!63;UBERON:0003056!8.92e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.70e-29,34;UBERON:0003528,1.88e-23,29;UBERON:0002791,1.88e-23,29;UBERON:0001893,1.88e-23,29;UBERON:0001017,2.48e-21,73;UBERON:0001016,1.48e-20,75;UBERON:0001049,2.49e-18,52;UBERON:0005068,2.49e-18,52;UBERON:0006241,2.49e-18,52;UBERON:0007135,2.49e-18,52;UBERON:0000956,2.58e-18,21;UBERON:0001869,2.58e-18,21;UBERON:0000203,2.58e-18,21;UBERON:0000073,2.02e-17,54;UBERON:0002780,3.86e-16,39;UBERON:0001890,3.86e-16,39;UBERON:0006240,3.86e-16,39;UBERON:0003080,1.30e-15,40;UBERON:0004121,1.31e-14,95;UBERON:0000924,1.31e-14,95;UBERON:0006601,1.31e-14,95;UBERON:0002619,1.42e-14,17;UBERON:0002616,1.96e-14,46;UBERON:0000955,5.13e-14,47;UBERON:0006238,5.13e-14,47;UBERON:0002346,9.78e-14,64;UBERON:0003075,9.78e-14,64;UBERON:0007284,9.78e-14,64;UBERON:0003056,7.71e-12,49;UBERON:0002021,8.28e-12,10;UBERON:0000411,8.28e-12,10;UBERON:0001950,8.28e-12,10;UBERON:0010371,2.69e-11,73;UBERON:0010314,1.49e-08,92;UBERON:0000025,2.22e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.856003649656029,0,1.33243904726265,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,3.17515336729816,13.5314253268605,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.872100625521786,1.31811709640683,1.36100929351998,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,2.83243045203437,1.05798195854407,2.53532561402472,3.38844532069132,1.77858959222228,1.7997994345628,0.988866362566974,2.8419204597844,1.19840044207362,3.07374644257244,1.45165457231869,2.70011876663381,1.89292465216244,1.42825492201902,1.98781686856452,1.5923803897944,0.575072826109418,7.35375029288017,0,0.255374676170375,0.768032666281217,3.56092976871523,1.46380229763855,4.16730696445408,0.558365998002762,1.12552522006336,1.83357897332172,0.589257170947335,1.13897344639282,2.23679334990361,0,0,0,0.860423876981386,0,0,3.24888208723835,6.2723764193627,0,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,3.01582567878545,1.63171705145613,0.491764273019036,0,0,0.117211686592203,0,0,0.631016438832513,0,0.646270193198397,2.15071918157297,0.891194696329576,0.849229592366497,0.404810701674894,2.63030272120181,0.790575555893047,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0,1.6942555278512,1.84130094602871,2.29158205375759,1.03111909406213,0.685082519770642,2.2661816921691,0.675022500231806,1.80128481289688,1.81256963593682,2.07104124700728,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.856003649656029,0,1.33243904726265,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0,3.17515336729816,13.5314253268605,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.872100625521786,1.31811709640683,1.36100929351998,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,2.83243045203437,1.05798195854407,2.53532561402472,3.38844532069132,1.77858959222228,1.7997994345628,0.988866362566974,2.8419204597844,1.19840044207362,3.07374644257244,1.45165457231869,2.70011876663381,1.89292465216244,1.42825492201902,1.98781686856452,1.5923803897944,0.575072826109418,7.35375029288017,0,0.255374676170375,0.768032666281217,3.56092976871523,1.46380229763855,4.16730696445408,0.558365998002762,1.12552522006336,1.83357897332172,0.589257170947335,1.13897344639282,2.23679334990361,0,0,0,0.860423876981386,0,0,3.24888208723835,6.2723764193627,0,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,1.79763881730844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,3.01582567878545,1.63171705145613,0.491764273019036,0,0,0.117211686592203,0,0,0.631016438832513,0,0.646270193198397,2.15071918157297,0.891194696329576,0.849229592366497,0.404810701674894,2.63030272120181,0.790575555893047,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0,0.187682475451182,0,0.214368379079066,0,1.6942555278512,1.84130094602871,2.29158205375759,1.03111909406213,0.685082519770642,2.2661816921691,0.675022500231806,1.80128481289688,1.81256963593682,2.07104124700728,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000082868 | |||
}} | }} |
Latest revision as of 14:34, 5 August 2015
Short description: | p1@ENSMUST00000082868 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000082868_5end |
Coexpression cluster: | MCL_coexpression_mm9:1020 |
Association with transcript: | 0bp_to_ENSMUST00000082868_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.26e-22 | 23 |
neuroblast (sensu Vertebrata) | 5.26e-22 | 23 |
neural cell | 1.24e-21 | 43 |
ectodermal cell | 5.30e-21 | 44 |
neurectodermal cell | 5.30e-21 | 44 |
neuron | 3.40e-18 | 33 |
neuronal stem cell | 3.40e-18 | 33 |
neuroblast | 3.40e-18 | 33 |
electrically signaling cell | 3.40e-18 | 33 |
somatic stem cell | 9.22e-18 | 91 |
multi fate stem cell | 9.22e-18 | 91 |
electrically responsive cell | 2.77e-16 | 39 |
electrically active cell | 2.77e-16 | 39 |
stem cell | 3.60e-16 | 97 |
embryonic cell | 5.77e-15 | 70 |
neuron of cerebral cortex | 1.15e-08 | 6 |
monopoietic cell | 1.43e-08 | 4 |
myeloid leukocyte | 1.43e-08 | 4 |
phagocyte | 1.43e-08 | 4 |
monocyte | 1.43e-08 | 4 |
macrophage | 1.43e-08 | 4 |
tissue-resident macrophage | 1.43e-08 | 4 |
macrophage dendritic cell progenitor | 1.43e-08 | 4 |
monoblast | 1.43e-08 | 4 |
promonocyte | 1.43e-08 | 4 |
striatum neuron | 2.51e-07 | 3 |
myeloid lineage restricted progenitor cell | 4.00e-07 | 13 |
granule cell | 8.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 9.70e-29 | 34 |
brain grey matter | 1.88e-23 | 29 |
regional part of telencephalon | 1.88e-23 | 29 |
telencephalon | 1.88e-23 | 29 |
central nervous system | 2.48e-21 | 73 |
nervous system | 1.48e-20 | 75 |
neural tube | 2.49e-18 | 52 |
neural rod | 2.49e-18 | 52 |
future spinal cord | 2.49e-18 | 52 |
neural keel | 2.49e-18 | 52 |
cerebral cortex | 2.58e-18 | 21 |
cerebral hemisphere | 2.58e-18 | 21 |
pallium | 2.58e-18 | 21 |
regional part of nervous system | 2.02e-17 | 54 |
regional part of forebrain | 3.86e-16 | 39 |
forebrain | 3.86e-16 | 39 |
future forebrain | 3.86e-16 | 39 |
anterior neural tube | 1.30e-15 | 40 |
ectoderm-derived structure | 1.31e-14 | 95 |
ectoderm | 1.31e-14 | 95 |
presumptive ectoderm | 1.31e-14 | 95 |
regional part of cerebral cortex | 1.42e-14 | 17 |
regional part of brain | 1.96e-14 | 46 |
brain | 5.13e-14 | 47 |
future brain | 5.13e-14 | 47 |
neurectoderm | 9.78e-14 | 64 |
neural plate | 9.78e-14 | 64 |
presumptive neural plate | 9.78e-14 | 64 |
pre-chordal neural plate | 7.71e-12 | 49 |
occipital lobe | 8.28e-12 | 10 |
visual cortex | 8.28e-12 | 10 |
neocortex | 8.28e-12 | 10 |
ecto-epithelium | 2.69e-11 | 73 |
structure with developmental contribution from neural crest | 1.49e-08 | 92 |
tube | 2.22e-07 | 114 |