FFCP PHASE1:Mm9::chr13:16119304..16119318,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1108|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:16119304..16119318,+|id=chr13:16119304..16119318,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.46e-10,3;CL:0002202,3.46e-10,3;CL:0000069,3.46e-10,3;CL:0002632,3.46e-10,3;CL:0002368,3.46e-10,3;CL:0000307,3.46e-10,3;CL:0000377,3.46e-10,3;CL:0000680,2.46e-08,6;CL:0000187,2.46e-08,6;CL:0000056,2.46e-08,6;CL:0000355,3.75e-08,9;CL:0000222,3.78e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003133!1.14e-08!24;UBERON:0005156!3.89e-08!26;UBERON:0000990!3.89e-08!26|ontology_enrichment_uberon_v019_2=UBERON:0003133,3.13e-11,24;UBERON:0005156,3.19e-10,26;UBERON:0000990,3.19e-10,26;UBERON:0003126,3.46e-10,3;UBERON:0001005,3.46e-10,3;UBERON:0007196,3.46e-10,3;UBERON:0001558,3.46e-10,3;UBERON:0005631,1.05e-09,3;UBERON:0000478,1.05e-09,3;UBERON:0000158,1.05e-09,3;UBERON:0004176,2.62e-08,17;UBERON:0009196,2.62e-08,17;UBERON:0009117,2.62e-08,17;UBERON:0001134,3.75e-08,9;UBERON:0002036,3.75e-08,9;UBERON:0002385,3.75e-08,9;UBERON:0000486,3.75e-08,9;UBERON:0007503,3.75e-08,9;UBERON:0001015,3.75e-08,9;UBERON:0002329,3.75e-08,9;UBERON:0003082,3.75e-08,9;UBERON:0003059,3.75e-08,9;UBERON:0007282,3.75e-08,9;UBERON:0004290,3.75e-08,9;UBERON:0009618,3.75e-08,9;UBERON:0000991,8.60e-08,18;UBERON:0005564,8.60e-08,18;UBERON:0000473,1.44e-07,14;UBERON:0000383,2.62e-07,10;UBERON:0005795,3.00e-07,4;UBERON:0000995,3.00e-07,4;UBERON:0003135,5.09e-07,15;UBERON:0001987,7.75e-07,2;UBERON:0003124,7.75e-07,2;UBERON:0004340,7.75e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,3.02152363141385,4.05507724878058,0.183546752161682,0,0,0,0,0,0,0,0,0,1.54355661621568,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0.454357159999104,0.453429360640713,0,0,0,0.539703191637817,1.29955283489534,0.448026887097336,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0.281686839553361,1.28326477414318,0,0,3.030874574157,1.52015919285059,3.0331466700887,0,0,0.148442139064825,0,0.304465478312141,0,0,0.823120949949934,0.251333182659351,1.97755974187499,0.433798070759735,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,1.37250180845588,0.879580464790051,0.173824320192276,0,0,0.811206315338788,1.73126918545538,0.373220911830279,0.252722758433675,0,0.260240885925407,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0,1.1270773567308,0,0,0,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0.549122826376163,10.0637744569148,0.372140947668503,0.936113019343682,1.76805214562978,0,0,0,0,0,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,1.21443210502468,0.584511715822624,0.790575555893047,1.28528526568723,4.40014264145633,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.17335854031855,2.75381692122966,0,0,0.484393280087717,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,1.94451188344048,1.42075805825504,6.42033276864957,4.5769323071844,1.43224823328345,0,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,1.68914227906064,0.183151624267265,0.428736758158132,0,0,0,1.71868654031819,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0.38581844092741,0,0,0.685738504770831,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p@chr13:16119304..16119318,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1108 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:16119304..16119318,+ | |||
|description=CAGE_peak_at_chr13:16119304..16119318,+ | |||
|id=chr13:16119304..16119318,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.46e-10,3;CL:0002202,3.46e-10,3;CL:0000069,3.46e-10,3;CL:0002632,3.46e-10,3;CL:0002368,3.46e-10,3;CL:0000307,3.46e-10,3;CL:0000377,3.46e-10,3;CL:0000680,2.46e-08,6;CL:0000187,2.46e-08,6;CL:0000056,2.46e-08,6;CL:0000355,3.75e-08,9;CL:0000222,3.78e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.14e-08!24;UBERON:0005156!3.89e-08!26;UBERON:0000990!3.89e-08!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,3.13e-11,24;UBERON:0005156,3.19e-10,26;UBERON:0000990,3.19e-10,26;UBERON:0003126,3.46e-10,3;UBERON:0001005,3.46e-10,3;UBERON:0007196,3.46e-10,3;UBERON:0001558,3.46e-10,3;UBERON:0005631,1.05e-09,3;UBERON:0000478,1.05e-09,3;UBERON:0000158,1.05e-09,3;UBERON:0004176,2.62e-08,17;UBERON:0009196,2.62e-08,17;UBERON:0009117,2.62e-08,17;UBERON:0001134,3.75e-08,9;UBERON:0002036,3.75e-08,9;UBERON:0002385,3.75e-08,9;UBERON:0000486,3.75e-08,9;UBERON:0007503,3.75e-08,9;UBERON:0001015,3.75e-08,9;UBERON:0002329,3.75e-08,9;UBERON:0003082,3.75e-08,9;UBERON:0003059,3.75e-08,9;UBERON:0007282,3.75e-08,9;UBERON:0004290,3.75e-08,9;UBERON:0009618,3.75e-08,9;UBERON:0000991,8.60e-08,18;UBERON:0005564,8.60e-08,18;UBERON:0000473,1.44e-07,14;UBERON:0000383,2.62e-07,10;UBERON:0005795,3.00e-07,4;UBERON:0000995,3.00e-07,4;UBERON:0003135,5.09e-07,15;UBERON:0001987,7.75e-07,2;UBERON:0003124,7.75e-07,2;UBERON:0004340,7.75e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,0,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,3.02152363141385,4.05507724878058,0.183546752161682,0,0,0,0,0,0,0,0,0,1.54355661621568,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0.454357159999104,0.453429360640713,0,0,0,0.539703191637817,1.29955283489534,0.448026887097336,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0.281686839553361,1.28326477414318,0,0,3.030874574157,1.52015919285059,3.0331466700887,0,0,0.148442139064825,0,0.304465478312141,0,0,0.823120949949934,0.251333182659351,1.97755974187499,0.433798070759735,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,1.37250180845588,0.879580464790051,0.173824320192276,0,0,0.811206315338788,1.73126918545538,0.373220911830279,0.252722758433675,0,0.260240885925407,0,0,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.703578179943289,0,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0.216138049874694,0,0,0,1.1270773567308,0,0,0,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0.549122826376163,10.0637744569148,0.372140947668503,0.936113019343682,1.76805214562978,0,0,0,0,0,0,0,0,0.238043640886014,0.390267295715598,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0,1.21443210502468,0.584511715822624,0.790575555893047,1.28528526568723,4.40014264145633,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.17335854031855,2.75381692122966,0,0,0.484393280087717,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,1.94451188344048,1.42075805825504,6.42033276864957,4.5769323071844,1.43224823328345,0,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0.167884616364078,0,1.68914227906064,0.183151624267265,0.428736758158132,0,0,0,1.71868654031819,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0.38581844092741,0,0,0.685738504770831,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr13:16119304..16119318,+ | |||
}} |
Latest revision as of 17:05, 5 August 2015
Short description: | p@chr13:16119304..16119318, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:16119304..16119318, + |
Coexpression cluster: | MCL_coexpression_mm9:1108 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.46e-10 | 3 |
epithelial cell of tracheobronchial tree | 3.46e-10 | 3 |
branched duct epithelial cell | 3.46e-10 | 3 |
epithelial cell of lower respiratory tract | 3.46e-10 | 3 |
respiratory epithelial cell | 3.46e-10 | 3 |
tracheal epithelial cell | 3.46e-10 | 3 |
tracheoblast | 3.46e-10 | 3 |
muscle precursor cell | 2.46e-08 | 6 |
muscle cell | 2.46e-08 | 6 |
myoblast | 2.46e-08 | 6 |
multi-potent skeletal muscle stem cell | 3.75e-08 | 9 |
mesodermal cell | 3.78e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
reproductive organ | 3.13e-11 | 24 |
reproductive structure | 3.19e-10 | 26 |
reproductive system | 3.19e-10 | 26 |
trachea | 3.46e-10 | 3 |
respiratory airway | 3.46e-10 | 3 |
tracheobronchial tree | 3.46e-10 | 3 |
lower respiratory tract | 3.46e-10 | 3 |
extraembryonic membrane | 1.05e-09 | 3 |
extraembryonic structure | 1.05e-09 | 3 |
membranous layer | 1.05e-09 | 3 |
external genitalia | 2.62e-08 | 17 |
indifferent external genitalia | 2.62e-08 | 17 |
indifferent gonad | 2.62e-08 | 17 |
skeletal muscle tissue | 3.75e-08 | 9 |
striated muscle tissue | 3.75e-08 | 9 |
muscle tissue | 3.75e-08 | 9 |
multilaminar epithelium | 3.75e-08 | 9 |
epithelial vesicle | 3.75e-08 | 9 |
musculature | 3.75e-08 | 9 |
somite | 3.75e-08 | 9 |
myotome | 3.75e-08 | 9 |
presomitic mesoderm | 3.75e-08 | 9 |
presumptive segmental plate | 3.75e-08 | 9 |
dermomyotome | 3.75e-08 | 9 |
trunk paraxial mesoderm | 3.75e-08 | 9 |
gonad | 8.60e-08 | 18 |
gonad primordium | 8.60e-08 | 18 |
testis | 1.44e-07 | 14 |
musculature of body | 2.62e-07 | 10 |
embryonic uterus | 3.00e-07 | 4 |
uterus | 3.00e-07 | 4 |
male reproductive organ | 5.09e-07 | 15 |
placenta | 7.75e-07 | 2 |
chorion | 7.75e-07 | 2 |
allantois | 7.75e-07 | 2 |