FFCP PHASE1:Mm9::chr6:41482948..41482969,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-141bp_to_uc009bpa.1_5end | |association_with_transcript=-141bp_to_uc009bpa.1_5end | ||
|cluster_id=chr6:41482948..41482969,+ | |||
|description=CAGE_peak_3_at_uc009bpa.1_5end | |description=CAGE_peak_3_at_uc009bpa.1_5end | ||
|id=chr6:41482948..41482969,+ | |id=chr6:41482948..41482969,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.32e-13!9;CL:0000789!3.32e-13!9;CL:0002420!3.32e-13!9;CL:0002419!3.32e-13!9;CL:0000790!3.32e-13!9;CL:0000838!1.40e-12!12;CL:0000084!4.96e-12!11;CL:0000827!4.96e-12!11;CL:0000624!6.41e-12!8;CL:0000542!2.38e-11!13;CL:0000051!2.38e-11!13;CL:0002031!3.15e-10!25;CL:0000893!2.82e-09!6;CL:0002489!2.82e-09!6;CL:0000898!2.82e-09!6;CL:0000809!2.82e-09!6;CL:0000810!2.82e-09!6;CL:0000895!2.82e-09!6;CL:0000808!2.82e-09!6;CL:0000894!2.82e-09!6;CL:0000806!2.82e-09!6;CL:0000807!2.82e-09!6;CL:0000805!2.82e-09!6;CL:0002425!2.82e-09!6;CL:0002436!2.82e-09!6;CL:0002427!2.82e-09!6;CL:0002428!2.82e-09!6;CL:0002429!2.82e-09!6;CL:0002433!2.82e-09!6;CL:0002431!2.82e-09!6;CL:0002432!2.82e-09!6;CL:0000738!6.61e-08!17;CL:0002087!6.61e-08!17;CL:0000988!8.67e-08!32;CL:0002032!8.67e-08!32;CL:0000037!8.67e-08!32;CL:0000566!8.67e-08!32;CL:0000837!8.67e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.81e-27,9;CL:0000789,2.81e-27,9;CL:0002420,2.81e-27,9;CL:0002419,2.81e-27,9;CL:0000790,2.81e-27,9;CL:0000624,1.99e-24,8;CL:0000084,5.28e-22,11;CL:0000827,5.28e-22,11;CL:0000838,5.03e-20,12;CL:0000893,1.39e-18,6;CL:0002489,1.39e-18,6;CL:0000898,1.39e-18,6;CL:0000809,1.39e-18,6;CL:0000810,1.39e-18,6;CL:0000895,1.39e-18,6;CL:0000808,1.39e-18,6;CL:0000894,1.39e-18,6;CL:0000806,1.39e-18,6;CL:0000807,1.39e-18,6;CL:0000805,1.39e-18,6;CL:0002425,1.39e-18,6;CL:0002436,1.39e-18,6;CL:0002427,1.39e-18,6;CL:0002428,1.39e-18,6;CL:0002429,1.39e-18,6;CL:0002433,1.39e-18,6;CL:0002431,1.39e-18,6;CL:0002432,1.39e-18,6;CL:0000542,2.38e-18,13;CL:0000051,2.38e-18,13;CL:0002031,4.16e-15,25;CL:0000738,1.27e-13,17;CL:0002087,1.27e-13,17;CL:0000988,3.03e-11,32;CL:0002032,3.03e-11,32;CL:0000037,3.03e-11,32;CL:0000837,3.03e-11,32;CL:0002320,4.54e-07,46;CL:0000134,4.54e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.27e-23!29;UBERON:0002370!2.49e-21!23;UBERON:0000974!2.49e-21!23;UBERON:0004807!2.49e-21!23;UBERON:0005058!2.49e-21!23;UBERON:0003351!2.49e-21!23;UBERON:0009113!2.49e-21!23;UBERON:0003295!2.49e-21!23;UBERON:0009722!2.49e-21!23;UBERON:0005562!2.49e-21!23;UBERON:0007690!2.49e-21!23;UBERON:0006562!3.88e-20!24;UBERON:0003408!3.88e-20!24;UBERON:0001557!3.88e-20!24;UBERON:0001042!3.88e-20!24;UBERON:0008814!3.88e-20!24;UBERON:0009145!3.88e-20!24;UBERON:0002193!7.69e-20!48;UBERON:0002390!1.32e-18!45;UBERON:0003061!1.32e-18!45;UBERON:0000065!3.41e-17!41;UBERON:0000072!4.23e-17!27;UBERON:0001004!1.44e-16!42;UBERON:0000063!6.25e-13!35;UBERON:0002405!3.39e-12!70;UBERON:0004119!2.18e-11!130;UBERON:0000925!2.18e-11!130;UBERON:0006595!2.18e-11!130;UBERON:0005057!2.25e-11!51;UBERON:0001007!5.02e-11!128;UBERON:0001555!5.02e-11!128;UBERON:0007026!5.02e-11!128;UBERON:0004921!1.21e-10!126;UBERON:0004185!1.21e-10!126;UBERON:0000077!2.23e-09!97;UBERON:0001041!5.01e-09!92;UBERON:0003081!7.64e-09!88;UBERON:0005911!2.96e-08!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.34e-47,23;UBERON:0000974,3.34e-47,23;UBERON:0004807,3.34e-47,23;UBERON:0005058,3.34e-47,23;UBERON:0003351,3.34e-47,23;UBERON:0009113,3.34e-47,23;UBERON:0003295,3.34e-47,23;UBERON:0009722,3.34e-47,23;UBERON:0005562,3.34e-47,23;UBERON:0007690,3.34e-47,23;UBERON:0006562,4.70e-45,24;UBERON:0003408,4.70e-45,24;UBERON:0001557,4.70e-45,24;UBERON:0001042,4.70e-45,24;UBERON:0008814,4.70e-45,24;UBERON:0009145,4.70e-45,24;UBERON:0004177,4.62e-44,29;UBERON:0005057,4.62e-44,29;UBERON:0000072,1.46e-39,27;UBERON:0000077,1.06e-35,35;UBERON:0002193,2.48e-35,48;UBERON:0002405,2.48e-35,48;UBERON:0002390,5.16e-35,45;UBERON:0003061,5.16e-35,45;UBERON:0007811,1.43e-28,36;UBERON:0000065,4.22e-27,41;UBERON:0001004,2.40e-26,42;UBERON:0000153,3.34e-23,43;UBERON:0003929,3.55e-17,55;UBERON:0003081,1.32e-15,87;UBERON:0002368,2.24e-15,60;UBERON:0001041,2.56e-14,80;UBERON:0005911,3.06e-14,69;UBERON:0002530,7.44e-14,65;UBERON:0000490,1.41e-13,66;UBERON:0000949,1.93e-13,72;UBERON:0000926,6.52e-11,120;UBERON:0004120,6.52e-11,120;UBERON:0006603,6.52e-11,120;UBERON:0004921,1.39e-08,114;UBERON:0001007,2.38e-08,116;UBERON:0001555,2.38e-08,116;UBERON:0007026,2.38e-08,116;UBERON:0004119,3.98e-08,118;UBERON:0000925,3.98e-08,118;UBERON:0006595,3.98e-08,118;UBERON:0002384,4.54e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,37.0583938277324,12.1078301050433,14.0438715793196,15.2383991720699,10.6096971463797,33.0417408767227,39.6014422958058,0.333109761815663,0.607425802169478,0,2.99689057090326,2.74228867211478,2.12194825899015,0.0850432901510698,0.0992909512008853,0,0.799962113967033,0,0,0,0,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,23.9369506863744,14.1159395639835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.58937883647172,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0.660837565967596,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,1.10851914099963,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.81931657357869,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,1.0935538217682,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,5.37218905067903,2.43270258348197,5.44368072973584,6.10627867995637,8.41425469637163,9.53670502950071,7.45211787023807,6.20296014133224,10.8034101444518,7.23964663222498,8.97353047717881,7.21188317474168,5.8689223400601,5.37633750035217,0,0,0,0,0.19318959403219,1.68914227906064,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,37.0583938277324,12.1078301050433,14.0438715793196,15.2383991720699,10.6096971463797,33.0417408767227,39.6014422958058,0.333109761815663,0.607425802169478,0,2.99689057090326,2.74228867211478,2.12194825899015,0.0850432901510698,0.0992909512008853,0,0.799962113967033,0,0,0,0,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,23.9369506863744,14.1159395639835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.58937883647172,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0.660837565967596,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,1.10851914099963,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0.318909537314974,0.81931657357869,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,1.0935538217682,1.14389086603261,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,5.37218905067903,2.43270258348197,5.44368072973584,6.10627867995637,8.41425469637163,9.53670502950071,7.45211787023807,6.20296014133224,10.8034101444518,7.23964663222498,8.97353047717881,7.21188317474168,5.8689223400601,5.37633750035217,0,0,0,0,0.19318959403219,1.68914227906064,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@uc009bpa.1 | |short_description=p3@uc009bpa.1 | ||
}} | }} |
Latest revision as of 17:38, 5 August 2015
Short description: | p3@uc009bpa.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_uc009bpa.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -141bp_to_uc009bpa.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data