FFCP PHASE1:Mm9::chr1:58810538..58810543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2313 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:58810538..58810543,+ | |||
|description=CAGE_peak_at_chr1:58810538..58810543,+ | |description=CAGE_peak_at_chr1:58810538..58810543,+ | ||
|id=chr1:58810538..58810543,+ | |id=chr1:58810538..58810543,+ | ||
|ontology_enrichment_celltype=CL:0000239!6.47e-31!6;CL:0000677!6.47e-31!6;CL:0000212!6.47e-31!6;CL:0000584!6.47e-31!6;CL:0000075!1.58e-26!7;CL:0000473!3.35e-23!3;CL:0000627!3.35e-23!3;CL:0000682!3.35e-23!3;CL:0002563!1.15e-20!9;CL:0002251!1.15e-20!9;CL:0000066!1.55e-18!25;CL:0002076!1.97e-12!15;CL:0000223!2.53e-09!20 | |ontology_enrichment_celltype=CL:0000239!6.47e-31!6;CL:0000677!6.47e-31!6;CL:0000212!6.47e-31!6;CL:0000584!6.47e-31!6;CL:0000075!1.58e-26!7;CL:0000473!3.35e-23!3;CL:0000627!3.35e-23!3;CL:0000682!3.35e-23!3;CL:0002563!1.15e-20!9;CL:0002251!1.15e-20!9;CL:0000066!1.55e-18!25;CL:0002076!1.97e-12!15;CL:0000223!2.53e-09!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.64e-38,3;CL:0000239,1.36e-33,6;CL:0000677,1.36e-33,6;CL:0000584,1.36e-33,6;CL:0000075,6.77e-29,7;CL:0000066,1.35e-24,25;CL:0002563,1.27e-22,9;CL:0002251,1.27e-22,9;CL:0000473,9.53e-17,7;CL:0002076,8.28e-14,15;CL:0000223,1.76e-10,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.27e-23!15;UBERON:0003350!1.15e-20!9;UBERON:0004808!1.15e-20!9;UBERON:0001277!1.15e-20!9;UBERON:0004923!6.45e-19!24;UBERON:0000485!6.26e-17!11;UBERON:0001962!2.24e-15!2;UBERON:0001961!2.24e-15!2;UBERON:0001744!2.24e-15!2;UBERON:0001242!2.45e-14!13;UBERON:0000060!2.45e-14!13;UBERON:0001262!2.45e-14!13;UBERON:0004786!2.45e-14!13;UBERON:0002465!1.42e-10!3;UBERON:0003199!1.74e-08!1;UBERON:0000305!2.89e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.27e-22,9;UBERON:0004808,1.27e-22,9;UBERON:0001277,1.27e-22,9;UBERON:0000485,1.27e-18,11;UBERON:0001242,7.56e-16,13;UBERON:0001262,7.56e-16,13;UBERON:0004786,7.56e-16,13;UBERON:0000344,8.28e-14,15;UBERON:0004923,8.28e-09,24;UBERON:0000160,6.57e-07,31 | |||
|phase1_expression=0,2.44282785347553,11.8299802241279,0.30246421130683,0,4.02910252588535,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.45881856213434,2.8711598205751,1.7230479846363,4.52489588640367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,11.8299802241279,0.30246421130683,0,4.02910252588535,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.45881856213434,2.8711598205751,1.7230479846363,4.52489588640367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:58810538..58810543,+ | |short_description=p@chr1:58810538..58810543,+ | ||
}} | }} |
Latest revision as of 19:18, 5 August 2015
Short description: | p@chr1:58810538..58810543, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:58810538..58810543, + |
Coexpression cluster: | MCL_coexpression_mm9:2313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.64e-38 | 3 |
brush border epithelial cell | 1.36e-33 | 6 |
gut absorptive cell | 1.36e-33 | 6 |
enterocyte | 1.36e-33 | 6 |
columnar/cuboidal epithelial cell | 6.77e-29 | 7 |
epithelial cell | 1.35e-24 | 25 |
intestinal epithelial cell | 1.27e-22 | 9 |
epithelial cell of alimentary canal | 1.27e-22 | 9 |
defensive cell | 9.53e-17 | 7 |
endo-epithelial cell | 8.28e-14 | 15 |
endodermal cell | 1.76e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.27e-22 | 9 |
gastrointestinal system epithelium | 1.27e-22 | 9 |
intestinal epithelium | 1.27e-22 | 9 |
simple columnar epithelium | 1.27e-18 | 11 |
intestinal mucosa | 7.56e-16 | 13 |
wall of intestine | 7.56e-16 | 13 |
gastrointestinal system mucosa | 7.56e-16 | 13 |
mucosa | 8.28e-14 | 15 |
organ component layer | 8.28e-09 | 24 |
intestine | 6.57e-07 | 31 |