FFCP PHASE1:Mm9::chr6:48544203..48544221,+: Difference between revisions
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{{FFCP|EntrezGene=58887|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-96bp_to_ENSMUST00000150030_5end|description=CAGE_peak_2_at_Repin1_5end|id=chr6:48544203..48544221,+|ontology_enrichment_celltype=CL:0000117!1.07e-11!23;CL:0000337!1.07e-11!23;CL:0000540!2.49e-08!33;CL:0000047!2.49e-08!33;CL:0000031!2.49e-08!33;CL:0000404!2.49e-08!33;CL:0002319!5.94e-08!43;CL:0000221!6.55e-08!44;CL:0000133!6.55e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-21,23;CL:0000337,1.10e-21,23;CL:0000540,5.71e-15,33;CL:0000047,5.71e-15,33;CL:0000031,5.71e-15,33;CL:0000404,5.71e-15,33;CL:0002319,1.53e-12,43;CL:0000221,4.01e-12,44;CL:0000133,4.01e-12,44;CL:0000393,8.01e-12,39;CL:0000211,8.01e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.88e-24!73;UBERON:0005743!3.88e-24!73;UBERON:0001049!9.13e-24!52;UBERON:0005068!9.13e-24!52;UBERON:0006241!9.13e-24!52;UBERON:0007135!9.13e-24!52;UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0000033!4.73e-23!63;UBERON:0002346!5.18e-23!71;UBERON:0003075!5.18e-23!71;UBERON:0007284!5.18e-23!71;UBERON:0004121!7.90e-23!102;UBERON:0000924!7.90e-23!102;UBERON:0006601!7.90e-23!102;UBERON:0000955!2.39e-22!50;UBERON:0006238!2.39e-22!50;UBERON:0002616!9.88e-22!49;UBERON:0003056!4.93e-20!49;UBERON:0003080!4.81e-18!40;UBERON:0002780!2.34e-17!39;UBERON:0001890!2.34e-17!39;UBERON:0006240!2.34e-17!39;UBERON:0002020!9.47e-17!34;UBERON:0002791!1.12e-13!29;UBERON:0003528!1.12e-13!29;UBERON:0001893!1.12e-13!29;UBERON:0007811!2.65e-13!86;UBERON:0000153!1.27e-12!94;UBERON:0002619!6.22e-09!17;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21;UBERON:0000025!1.64e-08!114;UBERON:0004111!1.76e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-44,54;UBERON:0001017,1.51e-43,73;UBERON:0001016,4.68e-42,75;UBERON:0001049,8.72e-42,52;UBERON:0005068,8.72e-42,52;UBERON:0006241,8.72e-42,52;UBERON:0007135,8.72e-42,52;UBERON:0000955,1.14e-34,47;UBERON:0006238,1.14e-34,47;UBERON:0002346,9.06e-34,64;UBERON:0003075,9.06e-34,64;UBERON:0007284,9.06e-34,64;UBERON:0002616,2.55e-33,46;UBERON:0004121,3.50e-32,95;UBERON:0000924,3.50e-32,95;UBERON:0006601,3.50e-32,95;UBERON:0002020,1.63e-30,34;UBERON:0003080,2.86e-29,40;UBERON:0010371,3.10e-28,73;UBERON:0002780,9.12e-28,39;UBERON:0001890,9.12e-28,39;UBERON:0006240,9.12e-28,39;UBERON:0003056,4.57e-24,49;UBERON:0003528,1.74e-23,29;UBERON:0002791,1.74e-23,29;UBERON:0001893,1.74e-23,29;UBERON:0010314,3.98e-20,92;UBERON:0002619,4.65e-14,17;UBERON:0002021,1.56e-13,10;UBERON:0000411,1.56e-13,10;UBERON:0001950,1.56e-13,10;UBERON:0002420,2.30e-13,8;UBERON:0007245,2.30e-13,8;UBERON:0010009,2.30e-13,8;UBERON:0010011,2.30e-13,8;UBERON:0000454,2.30e-13,8;UBERON:0000025,3.39e-13,114;UBERON:0000956,1.46e-12,21;UBERON:0001869,1.46e-12,21;UBERON:0000203,1.46e-12,21;UBERON:0003076,2.10e-12,12;UBERON:0003057,2.10e-12,12;UBERON:0004111,1.19e-11,122;UBERON:0002240,1.94e-09,6;UBERON:0005174,1.94e-09,6;UBERON:0001137,1.94e-09,6;UBERON:0011216,2.49e-09,194;UBERON:0000369,1.83e-08,5;UBERON:0002435,1.83e-08,5;UBERON:0001948,1.83e-08,5;UBERON:0002315,1.83e-08,5;UBERON:0000204,1.83e-08,5;UBERON:0010082,1.83e-08,5;UBERON:0002950,4.85e-08,4;UBERON:0001891,4.85e-08,4;UBERON:0009616,4.85e-08,4;UBERON:0010286,4.85e-08,4|phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,2.12608225377674,0.595745707205312,0.522399578277871,0.639969691173627,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0.65407546914134,0.439372365468944,1.1665793944457,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,0.207379224616955,0.405017814995072,0.210324961351382,1.71390590642282,2.42955395046775,1.22490799214954,1.43768206527355,0.919218786610021,1.10115880999389,3.06449611404451,1.68967186581868,2.1101806036831,2.56165402086747,1.56274011167028,4.4669279840221,3.37657566019008,4.12555268997387,2.35702868378934,2.13557521198654,2.79599168737951,0.151452386666368,0.226714680320357,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0.742210695324124,0.173485326766136,0.913396434936424,0.461230994512117,0.452167921657868,0.352766121407114,0,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0,0,3.22058876712702,5.02672096352292,0,0.11981512450592,0,0.127070227073065,2.99581278809645,4.57500602818627,2.1361239859187,1.91206752211504,2.30143911597297,2.90903262383384,4.86723789203273,0.305518091550949,0.373220911830279,0.252722758433675,0.420883711772948,0.520481771850815,0.689706313300419,0.360124259610698,0.452114453507145,0.748401490664606,0.640568601424249,0.468508622798644,1.55222022443409,0.646703978798527,0.189106080167819,0.527853372491847,0,0.834141747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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:58887 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-96bp_to_ENSMUST00000150030_5end | |||
|cluster_id=chr6:48544203..48544221,+ | |||
|description=CAGE_peak_2_at_Repin1_5end | |||
|id=chr6:48544203..48544221,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.07e-11!23;CL:0000337!1.07e-11!23;CL:0000540!2.49e-08!33;CL:0000047!2.49e-08!33;CL:0000031!2.49e-08!33;CL:0000404!2.49e-08!33;CL:0002319!5.94e-08!43;CL:0000221!6.55e-08!44;CL:0000133!6.55e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-21,23;CL:0000337,1.10e-21,23;CL:0000540,5.71e-15,33;CL:0000047,5.71e-15,33;CL:0000031,5.71e-15,33;CL:0000404,5.71e-15,33;CL:0002319,1.53e-12,43;CL:0000221,4.01e-12,44;CL:0000133,4.01e-12,44;CL:0000393,8.01e-12,39;CL:0000211,8.01e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.88e-24!73;UBERON:0005743!3.88e-24!73;UBERON:0001049!9.13e-24!52;UBERON:0005068!9.13e-24!52;UBERON:0006241!9.13e-24!52;UBERON:0007135!9.13e-24!52;UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0000033!4.73e-23!63;UBERON:0002346!5.18e-23!71;UBERON:0003075!5.18e-23!71;UBERON:0007284!5.18e-23!71;UBERON:0004121!7.90e-23!102;UBERON:0000924!7.90e-23!102;UBERON:0006601!7.90e-23!102;UBERON:0000955!2.39e-22!50;UBERON:0006238!2.39e-22!50;UBERON:0002616!9.88e-22!49;UBERON:0003056!4.93e-20!49;UBERON:0003080!4.81e-18!40;UBERON:0002780!2.34e-17!39;UBERON:0001890!2.34e-17!39;UBERON:0006240!2.34e-17!39;UBERON:0002020!9.47e-17!34;UBERON:0002791!1.12e-13!29;UBERON:0003528!1.12e-13!29;UBERON:0001893!1.12e-13!29;UBERON:0007811!2.65e-13!86;UBERON:0000153!1.27e-12!94;UBERON:0002619!6.22e-09!17;UBERON:0000956!1.01e-08!21;UBERON:0001869!1.01e-08!21;UBERON:0000203!1.01e-08!21;UBERON:0000025!1.64e-08!114;UBERON:0004111!1.76e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.04e-44,54;UBERON:0001017,1.51e-43,73;UBERON:0001016,4.68e-42,75;UBERON:0001049,8.72e-42,52;UBERON:0005068,8.72e-42,52;UBERON:0006241,8.72e-42,52;UBERON:0007135,8.72e-42,52;UBERON:0000955,1.14e-34,47;UBERON:0006238,1.14e-34,47;UBERON:0002346,9.06e-34,64;UBERON:0003075,9.06e-34,64;UBERON:0007284,9.06e-34,64;UBERON:0002616,2.55e-33,46;UBERON:0004121,3.50e-32,95;UBERON:0000924,3.50e-32,95;UBERON:0006601,3.50e-32,95;UBERON:0002020,1.63e-30,34;UBERON:0003080,2.86e-29,40;UBERON:0010371,3.10e-28,73;UBERON:0002780,9.12e-28,39;UBERON:0001890,9.12e-28,39;UBERON:0006240,9.12e-28,39;UBERON:0003056,4.57e-24,49;UBERON:0003528,1.74e-23,29;UBERON:0002791,1.74e-23,29;UBERON:0001893,1.74e-23,29;UBERON:0010314,3.98e-20,92;UBERON:0002619,4.65e-14,17;UBERON:0002021,1.56e-13,10;UBERON:0000411,1.56e-13,10;UBERON:0001950,1.56e-13,10;UBERON:0002420,2.30e-13,8;UBERON:0007245,2.30e-13,8;UBERON:0010009,2.30e-13,8;UBERON:0010011,2.30e-13,8;UBERON:0000454,2.30e-13,8;UBERON:0000025,3.39e-13,114;UBERON:0000956,1.46e-12,21;UBERON:0001869,1.46e-12,21;UBERON:0000203,1.46e-12,21;UBERON:0003076,2.10e-12,12;UBERON:0003057,2.10e-12,12;UBERON:0004111,1.19e-11,122;UBERON:0002240,1.94e-09,6;UBERON:0005174,1.94e-09,6;UBERON:0001137,1.94e-09,6;UBERON:0011216,2.49e-09,194;UBERON:0000369,1.83e-08,5;UBERON:0002435,1.83e-08,5;UBERON:0001948,1.83e-08,5;UBERON:0002315,1.83e-08,5;UBERON:0000204,1.83e-08,5;UBERON:0010082,1.83e-08,5;UBERON:0002950,4.85e-08,4;UBERON:0001891,4.85e-08,4;UBERON:0009616,4.85e-08,4;UBERON:0010286,4.85e-08,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0,0,0,0.137114433605739,0,2.12608225377674,0.595745707205312,0.522399578277871,0.639969691173627,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0.65407546914134,0.439372365468944,1.1665793944457,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,0.207379224616955,0.405017814995072,0.210324961351382,1.71390590642282,2.42955395046775,1.22490799214954,1.43768206527355,0.919218786610021,1.10115880999389,3.06449611404451,1.68967186581868,2.1101806036831,2.56165402086747,1.56274011167028,4.4669279840221,3.37657566019008,4.12555268997387,2.35702868378934,2.13557521198654,2.79599168737951,0.151452386666368,0.226714680320357,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0.742210695324124,0.173485326766136,0.913396434936424,0.461230994512117,0.452167921657868,0.352766121407114,0,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0,0,3.22058876712702,5.02672096352292,0,0.11981512450592,0,0.127070227073065,2.99581278809645,4.57500602818627,2.1361239859187,1.91206752211504,2.30143911597297,2.90903262383384,4.86723789203273,0.305518091550949,0.373220911830279,0.252722758433675,0.420883711772948,0.520481771850815,0.689706313300419,0.360124259610698,0.452114453507145,0.748401490664606,0.640568601424249,0.468508622798644,1.55222022443409,0.646703978798527,0.189106080167819,0.527853372491847,0,0.834141747676794,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0.36012412292203,0.946978942340841,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.243206428637567,0.438599962275997,0.439100230582101,0.134206418760372,1.68231958851302,0.617427674275707,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0,0,0.570676878337677,0,0,1.00534083520108,0.198956472041151,0,0.898819408654221,0,0,0,0.114248512609729,0,0.407302655690628,0,0.0701358198903186,0.442655759869801,1.03327103585722,0.784993639206874,0.740382983530803,0.592905254174298,0,0,0,0,0,0,0.575392274901621,0.486405680325106,0.549122826376163,0,0.372140947668503,0,0.505157755894224,0.717589654087649,0,0.369506380333209,0.37898282354097,0,0,0,0.670025029767263,0,0.195133647857799,0,0,0,0,0,0.433947175744535,0,0,0.491764273019036,0,1.60550589987792,2.69586879162067,0,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,1.16902343164525,0.395287777946524,1.92792789853084,0.283880170416537,0.534196811001766,0.488660878060728,0.164970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,5.10659408630682,0.36012218806262,0.517434735131018,0.428674070063185,1.41872186913819,0.356737635204141,1.15184314421485,2.13125464380219,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0.164140899745061,0,1.29797711407357,0,0,0,0,0,0.228778173206523,0.169978429993855,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0.26175594198403,0,0,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0.39061315453185,0.209718688851422,3.38217769156408,2.88030006257865,0.316011120628178,0,0,0.51968329191118,0.716106782669926,0,0.240390899039938,0,0.100966449948148,0.304827226619999,0.302478555410522,0,0.288635524920988,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.428736758158132,0.501572104035363,1.6942555278512,1.38097570952153,1.14579102687879,1.3748254587495,1.37016503954128,1.5107877947794,1.35004500046361,5.40385443869065,2.26571204492102,2.5888015587591,0.415149390336707,0,0.170733605754134,0,0,0.367687016900028,0.666740183404846,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.320125762024346,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0.188218760830661,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.818462086339379,0.619747364743864,0.578719832943424,1.49886346762768,0.467863216890817,0.859484216193193,0.765153328275374,0,0.695603506861264 | |||
|short_description=p2@Repin1 | |||
}} |
Revision as of 20:02, 5 August 2015
Short description: | p2@Repin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Repin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -96bp_to_ENSMUST00000150030_5end |
EntrezGene: | 58887 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.10e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-21 | 23 |
neuron | 5.71e-15 | 33 |
neuronal stem cell | 5.71e-15 | 33 |
neuroblast | 5.71e-15 | 33 |
electrically signaling cell | 5.71e-15 | 33 |
neural cell | 1.53e-12 | 43 |
ectodermal cell | 4.01e-12 | 44 |
neurectodermal cell | 4.01e-12 | 44 |
electrically responsive cell | 8.01e-12 | 39 |
electrically active cell | 8.01e-12 | 39 |