FFCP PHASE1:Mm9::chrX:102275420..102275437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:102275420..102275437,+ | |||
|description=CAGE_peak_at_chrX:102275420..102275437,+ | |description=CAGE_peak_at_chrX:102275420..102275437,+ | ||
|id=chrX:102275420..102275437,+ | |id=chrX:102275420..102275437,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000215,6.85e-22,3;CL:0000557,9.09e-16,7;CL:0000217,2.94e-15,2;CL:0000328,2.94e-15,2;CL:0002573,2.94e-15,2;CL:0002376,2.94e-15,2;CL:0000218,2.94e-15,2;CL:0000692,2.94e-15,2;CL:0002377,2.94e-15,2;CL:0002375,2.94e-15,2;CL:0000219,2.95e-14,54;CL:0000049,1.61e-12,19;CL:0002320,4.42e-11,46;CL:0000134,4.42e-11,46;CL:0000988,7.20e-10,32;CL:0002032,7.20e-10,32;CL:0000037,7.20e-10,32;CL:0000837,7.20e-10,32;CL:0000213,2.54e-08,1;CL:0002078,2.54e-08,1;CL:0000115,2.54e-08,1;CL:0002262,2.54e-08,1;CL:1000398,2.54e-08,1;CL:0000763,4.87e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.42e-11,46;UBERON:0002394,2.54e-08,1;UBERON:0001281,2.54e-08,1;UBERON:0000353,2.54e-08,1;UBERON:0003497,2.54e-08,1;UBERON:0003909,2.54e-08,1;UBERON:0003928,2.54e-08,1;UBERON:0003835,2.54e-08,1;UBERON:0003513,2.54e-08,1;UBERON:0001280,2.54e-08,1;UBERON:0004647,2.54e-08,1;UBERON:0002294,2.54e-08,1;UBERON:0001173,2.54e-08,1;UBERON:0004912,2.54e-08,1;UBERON:0005171,2.54e-08,1;UBERON:0002371,4.87e-07,16 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.985521055061667,1.63845168425395,0.68487187290202,0.239316476986009,0,0,0,0,0,0,0,0,0,0.297872853602656,0,0,0,0,0,0.430942465371778,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.614426133024974,0,0,0,0,0.56276261003168,0.763991238884051,0,0.142371680799103,0,3.10477392666055,4.91215140694106,2.6087803983151,0,1.3599426674155,0,0,0,0,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,1.7972268675888,0.599902730993408,1.01656181658452,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,4.21327912387941,1.02939162845886,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0.308713837137853,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,1.50791283939272,0,0,0,0,0.117211686592203,0.491804836130026,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0,0,0,0.178368817602071,0,0,0.469343416127421,1.48282449604674,0,0.32977250588296,0,0.301564624640779,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,1.18984900995699,0.419854356970974,0.967399816630967,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.448569283047378,0.335769232728157,0,0,0.36630324853453,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0.697950815278722,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0.985521055061667,1.63845168425395,0.68487187290202,0.239316476986009,0,0,0,0,0,0,0,0,0,0.297872853602656,0,0,0,0,0,0.430942465371778,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.255374676170375,0.614426133024974,0,0,0,0,0.56276261003168,0.763991238884051,0,0.142371680799103,0,3.10477392666055,4.91215140694106,2.6087803983151,0,1.3599426674155,0,0,0,0,0.340860645156116,0.519572009205738,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0.346970653532272,0.304465478312141,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,1.7972268675888,0.599902730993408,1.01656181658452,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0.324482526135515,0.203678727700633,0,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0.696504333044333,0.205782136407943,0.199034266818493,4.21327912387941,1.02939162845886,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0,0,0.308713837137853,0,0.264450566663544,0.213288250535234,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,1.50791283939272,0,0,0,0,0.117211686592203,0.491804836130026,0.252470927204373,0,0,0,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0,0,0,0.178368817602071,0,0,0.469343416127421,1.48282449604674,0,0.32977250588296,0,0.301564624640779,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,1.18984900995699,0.419854356970974,0.967399816630967,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.448569283047378,0.335769232728157,0,0,0.36630324853453,0,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chrX:102275420..102275437,+ | |short_description=p@chrX:102275420..102275437,+ | ||
}} | }} |
Latest revision as of 21:56, 5 August 2015
Short description: | p@chrX:102275420..102275437, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:102275420..102275437, + |
Coexpression cluster: | MCL_coexpression_mm9:1126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
barrier cell | 6.85e-22 | 3 |
granulocyte monocyte progenitor cell | 9.09e-16 | 7 |
insulating cell | 2.94e-15 | 2 |
myelin accumulating cell | 2.94e-15 | 2 |
Schwann cell | 2.94e-15 | 2 |
non-myelinating Schwann cell | 2.94e-15 | 2 |
myelinating Schwann cell;;Schwann cell | 2.94e-15 | 2 |
terminal Schwann cell | 2.94e-15 | 2 |
immature Schwann cell | 2.94e-15 | 2 |
Schwann cell precursor | 2.94e-15 | 2 |
motile cell | 2.95e-14 | 54 |
common myeloid progenitor | 1.61e-12 | 19 |
connective tissue cell | 4.42e-11 | 46 |
mesenchymal cell | 4.42e-11 | 46 |
hematopoietic cell | 7.20e-10 | 32 |
hematopoietic oligopotent progenitor cell | 7.20e-10 | 32 |
hematopoietic stem cell | 7.20e-10 | 32 |
hematopoietic multipotent progenitor cell | 7.20e-10 | 32 |
lining cell | 2.54e-08 | 1 |
meso-epithelial cell | 2.54e-08 | 1 |
endothelial cell | 2.54e-08 | 1 |
endothelial cell of sinusoid | 2.54e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.54e-08 | 1 |
myeloid cell | 4.87e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.42e-11 | 46 |
bile duct | 2.54e-08 | 1 |
hepatic sinusoid | 2.54e-08 | 1 |
parenchyma | 2.54e-08 | 1 |
abdomen blood vessel | 2.54e-08 | 1 |
sinusoid | 2.54e-08 | 1 |
digestive system duct | 2.54e-08 | 1 |
abdominal segment blood vessel | 2.54e-08 | 1 |
trunk blood vessel | 2.54e-08 | 1 |
liver parenchyma | 2.54e-08 | 1 |
liver lobule | 2.54e-08 | 1 |
biliary system | 2.54e-08 | 1 |
biliary tree | 2.54e-08 | 1 |
biliary bud | 2.54e-08 | 1 |
hepatic duct | 2.54e-08 | 1 |
bone marrow | 4.87e-07 | 16 |