FFCP PHASE1:Mm9::chr6:52176144..52176161,-: Difference between revisions
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{{FFCP|EntrezGene=15405|HGNC=|MCL_coexpression_id=2447|UniProt=P09631|association_with_transcript=0bp_to_ENSMUST00000114425_5end|description=CAGE_peak_2_at_Hoxa9_5end|id=chr6:52176144..52176161,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!7.22e-13!21;UBERON:0003102!8.79e-11!23;UBERON:0001008!8.89e-09!17;UBERON:0006554!1.66e-08!16;UBERON:0000026!2.02e-08!13;UBERON:0004708!2.02e-08!13;UBERON:0002101!2.02e-08!13;UBERON:0004357!2.02e-08!13;UBERON:0009872!2.02e-08!13;UBERON:0004347!2.02e-08!13;UBERON:0005732!2.02e-08!13;UBERON:0005733!2.02e-08!13;UBERON:0002113!3.24e-07!14;UBERON:0003918!3.24e-07!14;UBERON:0005095!3.24e-07!14;UBERON:0007687!3.24e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.87e-20,21;UBERON:0006554,1.43e-12,18;UBERON:0003102,4.08e-12,22;UBERON:0001008,1.05e-11,19;UBERON:0002113,2.30e-10,14;UBERON:0003918,2.30e-10,14;UBERON:0011143,2.30e-10,14;UBERON:0005095,2.30e-10,14;UBERON:0007687,2.30e-10,14;UBERON:0002240,3.56e-10,6;UBERON:0005174,3.56e-10,6;UBERON:0001137,3.56e-10,6;UBERON:0000026,5.98e-10,12;UBERON:0004708,5.98e-10,12;UBERON:0002101,5.98e-10,12;UBERON:0004357,5.98e-10,12;UBERON:0004347,5.98e-10,12;UBERON:0005732,5.98e-10,12;UBERON:0005733,5.98e-10,12;UBERON:0002102,1.79e-09,7;UBERON:0004710,1.79e-09,7;UBERON:0005419,1.79e-09,7;UBERON:0005417,1.79e-09,7;UBERON:0005729,1.79e-09,7;UBERON:0010707,5.32e-09,13;UBERON:0001948,7.28e-09,5;UBERON:0002315,7.28e-09,5;UBERON:0010708,4.08e-08,8;UBERON:0003103,5.69e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,8.14185799847259,7.31359409589019,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,11.4260393761521,9.49734726091938,0,0,0,0,0,0,0,0,0,0,0,0,6.18720029494702,6.12198227436143,13.4207600994216,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,4.94247935476367,4.1565760736459,3.88673531961374,0,0,2.54805239706646,0,0,0,0,0.68510327831436,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0,1.01219549843938,1.76922110389975,2.42650274921114,0.883366073841574,0.484875253135222,1.86391761218122,0,0,0,5.75112597628417,5.39912457894067,5.33694953706872,0,0,0,0,0,0,0,0.81471491080253,1.49288364732112,0,0,0,0,0,0,0,0,0,0,10.7783996466421,6.80781888604149,3.87092473160687,3.5071317188412,4.17070873838397,1.74126083261083,1.02891068203972,0.398068533636986,0.702213187313235,2.31613116403244,1.98914449576915,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.696710015581316,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.994782360205754,0.38992817423824,0,0.864552199498777,0.398282546508734,6.2590407314517,3.54170389090159,3.38123207019241,2.44381593414377,2.32742984601151,4.27828501330943,4.36332106157375,4.42830443938806,3.45397201251025,3.57851775373222,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,1.46598263418218,3.29940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,0,2.20528398054962,2.80306630000516,1.77610869365496,1.56813604813205,1.3130957840345,0.984845398470368,0,5.37733375830478,0.170870880797853,0.206386867963223,0,0.565105371014073,0.136694227721025,0,6.79913719975421,7.97723278244851,9.12119827109197,0,0.474503990371703,0,0,0,0,0,0,0,3.75883422546199,0,0,0,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,4.44336066274038,0.563047426353546,1.28206136987086,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,1.66059756134683,2.39414924040619,0.682934423016537,0.729320151204882,0.628839487883947,0.367687016900028,0.888986911206461,1.44224540067226,0.962757628775446,0,0.50695859978048,0.754505365544305,0.561849044819294,0.512201219238954,1.09127391015665,1.42888107384922,0.695305955669133,1.15745532278223,0,0.441596760403192,1.02860775715625,0.354951612318675,0.953744759789284,0.726732083161643,0.941093804153306,0.25384382367503,0.548783918618318,0.789209134313529,1.49384525230448,0.561142271657738,0.355905054372522,0.394017929502254,1.22769312950907,0.464810523557898,0.964533054905707,0,1.16965804222704,1.07435527024149,2.10417165275728,1.10295709559758,1.62307484934295|short_description=p2@Hoxa9}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15405 | |||
|HGNC= | |||
|MCL_coexpression_id=2447 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P09631 | |||
|association_with_transcript=0bp_to_ENSMUST00000114425_5end | |||
|cluster_id=chr6:52176144..52176161,- | |||
|description=CAGE_peak_2_at_Hoxa9_5end | |||
|id=chr6:52176144..52176161,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!7.22e-13!21;UBERON:0003102!8.79e-11!23;UBERON:0001008!8.89e-09!17;UBERON:0006554!1.66e-08!16;UBERON:0000026!2.02e-08!13;UBERON:0004708!2.02e-08!13;UBERON:0002101!2.02e-08!13;UBERON:0004357!2.02e-08!13;UBERON:0009872!2.02e-08!13;UBERON:0004347!2.02e-08!13;UBERON:0005732!2.02e-08!13;UBERON:0005733!2.02e-08!13;UBERON:0002113!3.24e-07!14;UBERON:0003918!3.24e-07!14;UBERON:0005095!3.24e-07!14;UBERON:0007687!3.24e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.87e-20,21;UBERON:0006554,1.43e-12,18;UBERON:0003102,4.08e-12,22;UBERON:0001008,1.05e-11,19;UBERON:0002113,2.30e-10,14;UBERON:0003918,2.30e-10,14;UBERON:0011143,2.30e-10,14;UBERON:0005095,2.30e-10,14;UBERON:0007687,2.30e-10,14;UBERON:0002240,3.56e-10,6;UBERON:0005174,3.56e-10,6;UBERON:0001137,3.56e-10,6;UBERON:0000026,5.98e-10,12;UBERON:0004708,5.98e-10,12;UBERON:0002101,5.98e-10,12;UBERON:0004357,5.98e-10,12;UBERON:0004347,5.98e-10,12;UBERON:0005732,5.98e-10,12;UBERON:0005733,5.98e-10,12;UBERON:0002102,1.79e-09,7;UBERON:0004710,1.79e-09,7;UBERON:0005419,1.79e-09,7;UBERON:0005417,1.79e-09,7;UBERON:0005729,1.79e-09,7;UBERON:0010707,5.32e-09,13;UBERON:0001948,7.28e-09,5;UBERON:0002315,7.28e-09,5;UBERON:0010708,4.08e-08,8;UBERON:0003103,5.69e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,8.14185799847259,7.31359409589019,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0,0,0,11.4260393761521,9.49734726091938,0,0,0,0,0,0,0,0,0,0,0,0,6.18720029494702,6.12198227436143,13.4207600994216,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,4.94247935476367,4.1565760736459,3.88673531961374,0,0,2.54805239706646,0,0,0,0,0.68510327831436,0.258937883647172,0.29688427812965,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0,1.01219549843938,1.76922110389975,2.42650274921114,0.883366073841574,0.484875253135222,1.86391761218122,0,0,0,5.75112597628417,5.39912457894067,5.33694953706872,0,0,0,0,0,0,0,0.81471491080253,1.49288364732112,0,0,0,0,0,0,0,0,0,0,10.7783996466421,6.80781888604149,3.87092473160687,3.5071317188412,4.17070873838397,1.74126083261083,1.02891068203972,0.398068533636986,0.702213187313235,2.31613116403244,1.98914449576915,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.696710015581316,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.994782360205754,0.38992817423824,0,0.864552199498777,0.398282546508734,6.2590407314517,3.54170389090159,3.38123207019241,2.44381593414377,2.32742984601151,4.27828501330943,4.36332106157375,4.42830443938806,3.45397201251025,3.57851775373222,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,1.46598263418218,3.29940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58138878870081,0,2.20528398054962,2.80306630000516,1.77610869365496,1.56813604813205,1.3130957840345,0.984845398470368,0,5.37733375830478,0.170870880797853,0.206386867963223,0,0.565105371014073,0.136694227721025,0,6.79913719975421,7.97723278244851,9.12119827109197,0,0.474503990371703,0,0,0,0,0,0,0,3.75883422546199,0,0,0,0.165458490457098,0,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,4.44336066274038,0.563047426353546,1.28206136987086,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,1.66059756134683,2.39414924040619,0.682934423016537,0.729320151204882,0.628839487883947,0.367687016900028,0.888986911206461,1.44224540067226,0.962757628775446,0,0.50695859978048,0.754505365544305,0.561849044819294,0.512201219238954,1.09127391015665,1.42888107384922,0.695305955669133,1.15745532278223,0,0.441596760403192,1.02860775715625,0.354951612318675,0.953744759789284,0.726732083161643,0.941093804153306,0.25384382367503,0.548783918618318,0.789209134313529,1.49384525230448,0.561142271657738,0.355905054372522,0.394017929502254,1.22769312950907,0.464810523557898,0.964533054905707,0,1.16965804222704,1.07435527024149,2.10417165275728,1.10295709559758,1.62307484934295 | |||
|short_description=p2@Hoxa9 | |||
}} |
Revision as of 22:36, 5 August 2015
Short description: | p2@Hoxa9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hoxa9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2447 |
Association with transcript: | 0bp_to_ENSMUST00000114425_5end |
EntrezGene: | 15405 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 8.87e-20 | 21 |
urinary system structure | 1.43e-12 | 18 |
surface structure | 4.08e-12 | 22 |
renal system | 1.05e-11 | 19 |
kidney | 2.30e-10 | 14 |
kidney mesenchyme | 2.30e-10 | 14 |
upper urinary tract | 2.30e-10 | 14 |
kidney rudiment | 2.30e-10 | 14 |
kidney field | 2.30e-10 | 14 |
spinal cord | 3.56e-10 | 6 |
dorsal region element | 3.56e-10 | 6 |
dorsum | 3.56e-10 | 6 |
appendage | 5.98e-10 | 12 |
paired limb/fin | 5.98e-10 | 12 |
limb | 5.98e-10 | 12 |
paired limb/fin bud | 5.98e-10 | 12 |
limb bud | 5.98e-10 | 12 |
limb/fin field | 5.98e-10 | 12 |
limb field | 5.98e-10 | 12 |
forelimb | 1.79e-09 | 7 |
pectoral appendage | 1.79e-09 | 7 |
pectoral appendage bud | 1.79e-09 | 7 |
forelimb bud | 1.79e-09 | 7 |
forelimb/pectoral fin field | 1.79e-09 | 7 |
appendage girdle complex | 5.32e-09 | 13 |
regional part of spinal cord | 7.28e-09 | 5 |
gray matter of spinal cord | 7.28e-09 | 5 |
pectoral complex | 4.08e-08 | 8 |
compound organ | 5.69e-07 | 43 |