FFCP PHASE1:Mm9::chr1:72895796..72895810,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=336 | |MCL_coexpression_id=336 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72895796..72895810,- | |||
|description=CAGE_peak_at_chr1:72895796..72895810,- | |description=CAGE_peak_at_chr1:72895796..72895810,- | ||
|id=chr1:72895796..72895810,- | |id=chr1:72895796..72895810,- | ||
|ontology_enrichment_celltype=CL:0002453!1.08e-12!8;CL:0000128!4.43e-10!6;CL:0000126!4.43e-10!6;CL:0000127!4.43e-10!6;CL:0000333!1.01e-09!10;CL:0000095!1.01e-09!10;CL:0000243!1.01e-09!10;CL:0000123!1.01e-09!10;CL:0000125!1.01e-09!10;CL:0000030!1.01e-09!10;CL:0000339!1.01e-09!10 | |ontology_enrichment_celltype=CL:0002453!1.08e-12!8;CL:0000128!4.43e-10!6;CL:0000126!4.43e-10!6;CL:0000127!4.43e-10!6;CL:0000333!1.01e-09!10;CL:0000095!1.01e-09!10;CL:0000243!1.01e-09!10;CL:0000123!1.01e-09!10;CL:0000125!1.01e-09!10;CL:0000030!1.01e-09!10;CL:0000339!1.01e-09!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.19e-31,8;CL:0000128,2.66e-29,6;CL:0000126,2.66e-29,6;CL:0000127,2.66e-29,6;CL:0000333,1.00e-24,10;CL:0000095,1.00e-24,10;CL:0000243,1.00e-24,10;CL:0000123,1.00e-24,10;CL:0000125,1.00e-24,10;CL:0000030,1.00e-24,10;CL:0000339,1.00e-24,10;CL:0002605,2.51e-15,2;CL:0002604,2.51e-15,2;CL:0002603,4.75e-15,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.64e-08!22;UBERON:0007499!8.64e-08!22;UBERON:0006925!8.64e-08!22;UBERON:0009497!8.64e-08!22;UBERON:0000015!8.64e-08!22;UBERON:0002423!8.64e-08!22;UBERON:0006235!8.64e-08!22;UBERON:0008835!8.64e-08!22;UBERON:0003894!8.64e-08!22;UBERON:0004161!8.64e-08!22;UBERON:0008836!8.64e-08!22;UBERON:0009854!2.63e-07!23;UBERON:0009856!2.63e-07!23 | |ontology_enrichment_uberon=UBERON:0002107!8.64e-08!22;UBERON:0007499!8.64e-08!22;UBERON:0006925!8.64e-08!22;UBERON:0009497!8.64e-08!22;UBERON:0000015!8.64e-08!22;UBERON:0002423!8.64e-08!22;UBERON:0006235!8.64e-08!22;UBERON:0008835!8.64e-08!22;UBERON:0003894!8.64e-08!22;UBERON:0004161!8.64e-08!22;UBERON:0008836!8.64e-08!22;UBERON:0009854!2.63e-07!23;UBERON:0009856!2.63e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.09e-14,22;UBERON:0007499,2.09e-14,22;UBERON:0006925,2.09e-14,22;UBERON:0009497,2.09e-14,22;UBERON:0000015,2.09e-14,22;UBERON:0002423,2.09e-14,22;UBERON:0006235,2.09e-14,22;UBERON:0008835,2.09e-14,22;UBERON:0003894,2.09e-14,22;UBERON:0004161,2.09e-14,22;UBERON:0008836,2.09e-14,22;UBERON:0009854,9.25e-14,23;UBERON:0009856,9.25e-14,23;UBERON:0002365,1.27e-12,25;UBERON:0002330,1.27e-12,25;UBERON:0002037,5.65e-08,4;UBERON:0002680,5.65e-08,4;UBERON:0001895,5.65e-08,4;UBERON:0010092,5.65e-08,4;UBERON:0006215,5.65e-08,4;UBERON:0005256,8.79e-07,45 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25913075478431,5.45062890951116,8.12838876117546,15.3599620268684,0.839918529752175,2.87505128729943,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0.898800331555214,1.15265491596466,0.103689612308478,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.284743361598206,0,0,0,0,0.860423876981386,0,0.539703191637817,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0,0,0.305518091550949,0,0,0,0,0.459804208866946,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,1.45921704097532,3.29473695825698,1.43768206527355,2.23284568601102,3.12037673114561,1.01031551178845,0.538192240565737,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0.535106452806212,0.164549020602121,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.436725127492355,0.134864346384821,0.41326727862668,0.785267825952089,0,0,0,0,0,0,0.258319646955462,0,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25913075478431,5.45062890951116,8.12838876117546,15.3599620268684,0.839918529752175,2.87505128729943,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0.898800331555214,1.15265491596466,0.103689612308478,0,0,0,0.441737081903227,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.284743361598206,0,0,0,0,0.860423876981386,0,0.539703191637817,1.29955283489534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0.511430914660661,0,0,0.305518091550949,0,0,0,0,0.459804208866946,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,1.45921704097532,3.29473695825698,1.43768206527355,2.23284568601102,3.12037673114561,1.01031551178845,0.538192240565737,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0.535106452806212,0.164549020602121,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.436725127492355,0.134864346384821,0.41326727862668,0.785267825952089,0,0,0,0,0,0,0.258319646955462,0,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:72895796..72895810,- | |short_description=p@chr1:72895796..72895810,- | ||
}} | }} |
Latest revision as of 23:17, 5 August 2015
Short description: | p@chr1:72895796..72895810, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72895796..72895810, - |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.19e-31 | 8 |
oligodendrocyte | 2.66e-29 | 6 |
macroglial cell | 2.66e-29 | 6 |
astrocyte | 2.66e-29 | 6 |
migratory neural crest cell | 1.00e-24 | 10 |
neuron associated cell | 1.00e-24 | 10 |
glial cell (sensu Vertebrata) | 1.00e-24 | 10 |
neuron associated cell (sensu Vertebrata) | 1.00e-24 | 10 |
glial cell | 1.00e-24 | 10 |
glioblast | 1.00e-24 | 10 |
glioblast (sensu Vertebrata) | 1.00e-24 | 10 |
astrocyte of the cerebral cortex | 2.51e-15 | 2 |
astrocyte of the hippocampus | 2.51e-15 | 2 |
astrocyte of the cerebellum | 4.75e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.09e-14 | 22 |
epithelial sac | 2.09e-14 | 22 |
digestive gland | 2.09e-14 | 22 |
epithelium of foregut-midgut junction | 2.09e-14 | 22 |
anatomical boundary | 2.09e-14 | 22 |
hepatobiliary system | 2.09e-14 | 22 |
foregut-midgut junction | 2.09e-14 | 22 |
hepatic diverticulum | 2.09e-14 | 22 |
liver primordium | 2.09e-14 | 22 |
septum transversum | 2.09e-14 | 22 |
liver bud | 2.09e-14 | 22 |
digestive tract diverticulum | 9.25e-14 | 23 |
sac | 9.25e-14 | 23 |
exocrine gland | 1.27e-12 | 25 |
exocrine system | 1.27e-12 | 25 |
cerebellum | 5.65e-08 | 4 |
regional part of metencephalon | 5.65e-08 | 4 |
metencephalon | 5.65e-08 | 4 |
future metencephalon | 5.65e-08 | 4 |
rhombic lip | 5.65e-08 | 4 |
trunk mesenchyme | 8.79e-07 | 45 |