FFCP PHASE1:Mm9::chr1:72898749..72898763,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=336 | |MCL_coexpression_id=336 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72898749..72898763,+ | |||
|description=CAGE_peak_at_chr1:72898749..72898763,+ | |description=CAGE_peak_at_chr1:72898749..72898763,+ | ||
|id=chr1:72898749..72898763,+ | |id=chr1:72898749..72898763,+ | ||
|ontology_enrichment_celltype=CL:0002453!1.46e-11!8;CL:0000128!3.87e-09!6;CL:0000126!3.87e-09!6;CL:0000127!3.87e-09!6;CL:0000333!8.82e-09!10;CL:0000095!8.82e-09!10;CL:0000243!8.82e-09!10;CL:0000123!8.82e-09!10;CL:0000125!8.82e-09!10;CL:0000030!8.82e-09!10;CL:0000339!8.82e-09!10 | |ontology_enrichment_celltype=CL:0002453!1.46e-11!8;CL:0000128!3.87e-09!6;CL:0000126!3.87e-09!6;CL:0000127!3.87e-09!6;CL:0000333!8.82e-09!10;CL:0000095!8.82e-09!10;CL:0000243!8.82e-09!10;CL:0000123!8.82e-09!10;CL:0000125!8.82e-09!10;CL:0000030!8.82e-09!10;CL:0000339!8.82e-09!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.44e-37,8;CL:0000333,6.97e-30,10;CL:0000095,6.97e-30,10;CL:0000243,6.97e-30,10;CL:0000123,6.97e-30,10;CL:0000125,6.97e-30,10;CL:0000030,6.97e-30,10;CL:0000339,6.97e-30,10;CL:0000128,8.20e-29,6;CL:0000126,8.20e-29,6;CL:0000127,8.20e-29,6;CL:0002605,4.26e-11,2;CL:0002604,4.26e-11,2;CL:0000219,1.03e-10,54;CL:0002603,1.29e-10,2;CL:0000878,2.47e-10,2;CL:0000129,2.47e-10,2;CL:0000182,1.45e-08,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.88e-08!22;UBERON:0007499!5.88e-08!22;UBERON:0006925!5.88e-08!22;UBERON:0009497!5.88e-08!22;UBERON:0000015!5.88e-08!22;UBERON:0002423!5.88e-08!22;UBERON:0006235!5.88e-08!22;UBERON:0008835!5.88e-08!22;UBERON:0003894!5.88e-08!22;UBERON:0004161!5.88e-08!22;UBERON:0008836!5.88e-08!22;UBERON:0002365!1.19e-07!25;UBERON:0002330!1.19e-07!25;UBERON:0009854!1.92e-07!23;UBERON:0009856!1.92e-07!23 | |ontology_enrichment_uberon=UBERON:0002107!5.88e-08!22;UBERON:0007499!5.88e-08!22;UBERON:0006925!5.88e-08!22;UBERON:0009497!5.88e-08!22;UBERON:0000015!5.88e-08!22;UBERON:0002423!5.88e-08!22;UBERON:0006235!5.88e-08!22;UBERON:0008835!5.88e-08!22;UBERON:0003894!5.88e-08!22;UBERON:0004161!5.88e-08!22;UBERON:0008836!5.88e-08!22;UBERON:0002365!1.19e-07!25;UBERON:0002330!1.19e-07!25;UBERON:0009854!1.92e-07!23;UBERON:0009856!1.92e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.10e-16,22;UBERON:0007499,6.10e-16,22;UBERON:0006925,6.10e-16,22;UBERON:0009497,6.10e-16,22;UBERON:0000015,6.10e-16,22;UBERON:0002423,6.10e-16,22;UBERON:0006235,6.10e-16,22;UBERON:0008835,6.10e-16,22;UBERON:0003894,6.10e-16,22;UBERON:0004161,6.10e-16,22;UBERON:0008836,6.10e-16,22;UBERON:0009854,3.39e-15,23;UBERON:0009856,3.39e-15,23;UBERON:0002365,6.94e-14,25;UBERON:0002330,6.94e-14,25;UBERON:0005256,3.63e-07,45;UBERON:0003914,8.27e-07,47 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,4.79655344036982,7.68901639570651,19.0541301092798,1.39986421625363,5.75010257459886,0,0,0,0,0,0,0,0.528990979272033,0,0.677689064138264,1.77858959222228,0,0,0,1.79760066311043,1.92109152660777,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0.860423876981386,1.3599426674155,0,1.29955283489534,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.520481771850815,0.229902104433473,0,0.150704817835715,0,0,0.374806898238915,0.517406741478031,0.215567992932842,0,0,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0.25462585178142,0,9.72811360650212,2.19649130550465,10.0637744569148,5.20997326735905,1.5601883655728,1.01031551178845,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0.418176592028937,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,0,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,4.79655344036982,7.68901639570651,19.0541301092798,1.39986421625363,5.75010257459886,0,0,0,0,0,0,0,0.528990979272033,0,0.677689064138264,1.77858959222228,0,0,0,1.79760066311043,1.92109152660777,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0.860423876981386,1.3599426674155,0,1.29955283489534,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0.520481771850815,0.229902104433473,0,0.150704817835715,0,0,0.374806898238915,0.517406741478031,0.215567992932842,0,0,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0.25462585178142,0,9.72811360650212,2.19649130550465,10.0637744569148,5.20997326735905,1.5601883655728,1.01031551178845,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0.418176592028937,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12609485270709,0,0.214368379079066,0,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr1:72898749..72898763,+ | |short_description=p@chr1:72898749..72898763,+ | ||
}} | }} |
Latest revision as of 23:20, 5 August 2015
Short description: | p@chr1:72898749..72898763, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72898749..72898763, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.44e-37 | 8 |
migratory neural crest cell | 6.97e-30 | 10 |
neuron associated cell | 6.97e-30 | 10 |
glial cell (sensu Vertebrata) | 6.97e-30 | 10 |
neuron associated cell (sensu Vertebrata) | 6.97e-30 | 10 |
glial cell | 6.97e-30 | 10 |
glioblast | 6.97e-30 | 10 |
glioblast (sensu Vertebrata) | 6.97e-30 | 10 |
oligodendrocyte | 8.20e-29 | 6 |
macroglial cell | 8.20e-29 | 6 |
astrocyte | 8.20e-29 | 6 |
astrocyte of the cerebral cortex | 4.26e-11 | 2 |
astrocyte of the hippocampus | 4.26e-11 | 2 |
motile cell | 1.03e-10 | 54 |
astrocyte of the cerebellum | 1.29e-10 | 2 |
central nervous system macrophage | 2.47e-10 | 2 |
microglial cell | 2.47e-10 | 2 |
hepatocyte | 1.45e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 6.10e-16 | 22 |
epithelial sac | 6.10e-16 | 22 |
digestive gland | 6.10e-16 | 22 |
epithelium of foregut-midgut junction | 6.10e-16 | 22 |
anatomical boundary | 6.10e-16 | 22 |
hepatobiliary system | 6.10e-16 | 22 |
foregut-midgut junction | 6.10e-16 | 22 |
hepatic diverticulum | 6.10e-16 | 22 |
liver primordium | 6.10e-16 | 22 |
septum transversum | 6.10e-16 | 22 |
liver bud | 6.10e-16 | 22 |
digestive tract diverticulum | 3.39e-15 | 23 |
sac | 3.39e-15 | 23 |
exocrine gland | 6.94e-14 | 25 |
exocrine system | 6.94e-14 | 25 |
trunk mesenchyme | 3.63e-07 | 45 |
epithelial tube | 8.27e-07 | 47 |