FFCP PHASE1:Mm9::chr5:112675556..112675574,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=253|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:112675556..112675574,-|id=chr5:112675556..112675574,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.68e-53!9;UBERON:0000019!1.68e-53!9;UBERON:0000047!1.68e-53!9;UBERON:0004088!1.68e-53!9;UBERON:0002104!1.68e-53!9;UBERON:0001456!1.68e-53!9;UBERON:0003072!1.68e-53!9;UBERON:0003071!1.68e-53!9;UBERON:0004128!1.68e-53!9;UBERON:0001444!1.24e-43!11;UBERON:0000020!6.26e-40!12;UBERON:0001032!6.26e-40!12;UBERON:0004456!6.26e-40!12;UBERON:0005085!8.53e-37!13;UBERON:0003056!4.90e-09!49;UBERON:0002346!2.75e-07!71;UBERON:0003075!2.75e-07!71;UBERON:0007284!2.75e-07!71;UBERON:0000033!8.80e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.97e-77,9;UBERON:0000019,4.97e-77,9;UBERON:0000047,4.97e-77,9;UBERON:0010312,4.97e-77,9;UBERON:0004088,4.97e-77,9;UBERON:0002104,4.97e-77,9;UBERON:0001456,4.97e-77,9;UBERON:0003072,4.97e-77,9;UBERON:0004128,4.97e-77,9;UBERON:0003071,4.97e-77,9;UBERON:0001444,4.29e-63,11;UBERON:0000020,7.26e-58,12;UBERON:0001032,7.26e-58,12;UBERON:0004456,7.26e-58,12;UBERON:0000033,1.94e-53,13;UBERON:0005085,1.94e-53,13;UBERON:0007811,2.05e-19,36;UBERON:0000153,2.91e-16,43;UBERON:0003056,2.84e-14,49;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,1.69156575851515,1.14951052216736,1.26043490863744,11.6042709733501,1.08858398642125,2.8185018462667,1.21812241927647,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p@chr5:112675556..112675574,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=253 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:112675556..112675574,- | |||
|description=CAGE_peak_at_chr5:112675556..112675574,- | |||
|id=chr5:112675556..112675574,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.68e-53!9;UBERON:0000019!1.68e-53!9;UBERON:0000047!1.68e-53!9;UBERON:0004088!1.68e-53!9;UBERON:0002104!1.68e-53!9;UBERON:0001456!1.68e-53!9;UBERON:0003072!1.68e-53!9;UBERON:0003071!1.68e-53!9;UBERON:0004128!1.68e-53!9;UBERON:0001444!1.24e-43!11;UBERON:0000020!6.26e-40!12;UBERON:0001032!6.26e-40!12;UBERON:0004456!6.26e-40!12;UBERON:0005085!8.53e-37!13;UBERON:0003056!4.90e-09!49;UBERON:0002346!2.75e-07!71;UBERON:0003075!2.75e-07!71;UBERON:0007284!2.75e-07!71;UBERON:0000033!8.80e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.97e-77,9;UBERON:0000019,4.97e-77,9;UBERON:0000047,4.97e-77,9;UBERON:0010312,4.97e-77,9;UBERON:0004088,4.97e-77,9;UBERON:0002104,4.97e-77,9;UBERON:0001456,4.97e-77,9;UBERON:0003072,4.97e-77,9;UBERON:0004128,4.97e-77,9;UBERON:0003071,4.97e-77,9;UBERON:0001444,4.29e-63,11;UBERON:0000020,7.26e-58,12;UBERON:0001032,7.26e-58,12;UBERON:0004456,7.26e-58,12;UBERON:0000033,1.94e-53,13;UBERON:0005085,1.94e-53,13;UBERON:0007811,2.05e-19,36;UBERON:0000153,2.91e-16,43;UBERON:0003056,2.84e-14,49;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,1.69156575851515,1.14951052216736,1.26043490863744,11.6042709733501,1.08858398642125,2.8185018462667,1.21812241927647,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:112675556..112675574,- | |||
}} |
Latest revision as of 00:59, 6 August 2015
Short description: | p@chr5:112675556..112675574, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:112675556..112675574, - |
Coexpression cluster: | MCL_coexpression_mm9:253 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.97e-77 | 9 |
camera-type eye | 4.97e-77 | 9 |
simple eye | 4.97e-77 | 9 |
immature eye | 4.97e-77 | 9 |
ocular region | 4.97e-77 | 9 |
visual system | 4.97e-77 | 9 |
face | 4.97e-77 | 9 |
optic cup | 4.97e-77 | 9 |
optic vesicle | 4.97e-77 | 9 |
eye primordium | 4.97e-77 | 9 |
subdivision of head | 4.29e-63 | 11 |
sense organ | 7.26e-58 | 12 |
sensory system | 7.26e-58 | 12 |
entire sense organ system | 7.26e-58 | 12 |
head | 1.94e-53 | 13 |
ectodermal placode | 1.94e-53 | 13 |
craniocervical region | 2.05e-19 | 36 |
anterior region of body | 2.91e-16 | 43 |
pre-chordal neural plate | 2.84e-14 | 49 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |