FFCP PHASE1:Mm9::chr13:51664540..51664561,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:51664540..51664561,-|id=chr13:51664540..51664561,-|ontology_enrichment_celltype=CL:0000540!1.54e-21!33;CL:0000047!1.54e-21!33;CL:0000031!1.54e-21!33;CL:0000404!1.54e-21!33;CL:0000117!3.93e-21!23;CL:0000337!3.93e-21!23;CL:0000221!2.06e-19!44;CL:0000133!2.06e-19!44;CL:0002319!5.76e-19!43;CL:0000393!1.10e-17!39;CL:0000211!1.10e-17!39;CL:0000055!1.31e-15!50;CL:0002321!1.51e-08!70;CL:0000220!1.51e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-30,23;CL:0000337,1.54e-30,23;CL:0000540,9.21e-22,33;CL:0000047,9.21e-22,33;CL:0000031,9.21e-22,33;CL:0000404,9.21e-22,33;CL:0000393,1.38e-17,39;CL:0000211,1.38e-17,39;CL:0002319,1.86e-15,43;CL:0000221,5.50e-15,44;CL:0000133,5.50e-15,44;CL:0002321,1.53e-07,70;CL:0002609,1.64e-07,6;CL:0002613,3.38e-07,3;CL:0002612,5.40e-07,3;CL:0000120,5.66e-07,3;CL:0002610,9.39e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.15e-44!73;UBERON:0005743!5.15e-44!73;UBERON:0000073!3.14e-42!75;UBERON:0001016!3.14e-42!75;UBERON:0001049!3.26e-35!52;UBERON:0005068!3.26e-35!52;UBERON:0006241!3.26e-35!52;UBERON:0007135!3.26e-35!52;UBERON:0000955!2.95e-33!50;UBERON:0006238!2.95e-33!50;UBERON:0002616!2.10e-32!49;UBERON:0002020!3.96e-29!34;UBERON:0004121!8.70e-29!102;UBERON:0000924!8.70e-29!102;UBERON:0006601!8.70e-29!102;UBERON:0000033!2.25e-27!63;UBERON:0003080!3.99e-27!40;UBERON:0002780!3.31e-26!39;UBERON:0001890!3.31e-26!39;UBERON:0006240!3.31e-26!39;UBERON:0002791!1.41e-24!29;UBERON:0003528!1.41e-24!29;UBERON:0001893!1.41e-24!29;UBERON:0002346!3.27e-24!71;UBERON:0003075!3.27e-24!71;UBERON:0007284!3.27e-24!71;UBERON:0003056!1.26e-21!49;UBERON:0000956!1.52e-17!21;UBERON:0001869!1.52e-17!21;UBERON:0000203!1.52e-17!21;UBERON:0007811!1.82e-15!86;UBERON:0002619!3.88e-14!17;UBERON:0000153!4.20e-14!94;UBERON:0002021!5.53e-11!10;UBERON:0000411!5.53e-11!10;UBERON:0001950!5.53e-11!10;UBERON:0000025!2.43e-08!114;UBERON:0003076!2.93e-08!12;UBERON:0003057!2.93e-08!12;UBERON:0002420!4.05e-08!8;UBERON:0007245!4.05e-08!8;UBERON:0010009!4.05e-08!8;UBERON:0010011!4.05e-08!8;UBERON:0000454!4.05e-08!8;UBERON:0004111!7.31e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.54e-44,54;UBERON:0001017,1.27e-43,73;UBERON:0001016,3.26e-42,75;UBERON:0001049,7.20e-41,52;UBERON:0005068,7.20e-41,52;UBERON:0006241,7.20e-41,52;UBERON:0007135,7.20e-41,52;UBERON:0002020,4.96e-39,34;UBERON:0003080,1.12e-36,40;UBERON:0002780,5.09e-35,39;UBERON:0001890,5.09e-35,39;UBERON:0006240,5.09e-35,39;UBERON:0000955,1.39e-34,47;UBERON:0006238,1.39e-34,47;UBERON:0002346,1.37e-33,64;UBERON:0003075,1.37e-33,64;UBERON:0007284,1.37e-33,64;UBERON:0003528,3.61e-33,29;UBERON:0002791,3.61e-33,29;UBERON:0001893,3.61e-33,29;UBERON:0002616,3.79e-33,46;UBERON:0004121,2.20e-31,95;UBERON:0000924,2.20e-31,95;UBERON:0006601,2.20e-31,95;UBERON:0003056,1.40e-28,49;UBERON:0010371,2.17e-28,73;UBERON:0000956,3.81e-25,21;UBERON:0001869,3.81e-25,21;UBERON:0000203,3.81e-25,21;UBERON:0010314,9.33e-21,92;UBERON:0002619,9.27e-19,17;UBERON:0002021,5.67e-17,10;UBERON:0000411,5.67e-17,10;UBERON:0001950,5.67e-17,10;UBERON:0000025,4.63e-14,114;UBERON:0004111,1.37e-12,122;UBERON:0011216,1.48e-10,194;UBERON:0002420,5.70e-09,8;UBERON:0007245,5.70e-09,8;UBERON:0010009,5.70e-09,8;UBERON:0010011,5.70e-09,8;UBERON:0000454,5.70e-09,8;UBERON:0002240,1.48e-08,6;UBERON:0005174,1.48e-08,6;UBERON:0001137,1.48e-08,6;UBERON:0000369,2.96e-07,5;UBERON:0002435,2.96e-07,5;UBERON:0000204,2.96e-07,5;UBERON:0010082,2.96e-07,5;UBERON:0002257,5.40e-07,3;UBERON:0000483,5.52e-07,174;UBERON:0000119,8.23e-07,176;UBERON:0001948,8.48e-07,5;UBERON:0002315,8.48e-07,5;UBERON:0004684,9.39e-07,3;UBERON:0002275,9.39e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0,0,0,0,0,0,0,0.286533439938757,0,2.22548106945558,4.23192783417626,2.53532561402472,0,0,0,0,0,0.599200221036809,0.768436610643109,1.24427534770173,2.16009501330705,1.89292465216244,0.571301968807607,1.76694832761291,1.83736198822431,1.34183659425531,0.919218786610021,3.30347642998166,2.55374676170375,1.68967186581868,3.03338461779446,2.56165402086747,4.16730696445408,0.837548997004143,2.25105044012672,1.5279824777681,3.24091444021034,3.70166370077668,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,1.17112318804619,0.209446706813455,0,0,0,0,2.09706895166752,0.457500602818626,3.26701315493447,2.9550134432687,4.34716277461562,1.24672826735736,2.43361894601636,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,4.21908910755066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:51664540..51664561,- | |||
|description=CAGE_peak_at_chr13:51664540..51664561,- | |||
|id=chr13:51664540..51664561,- | |||
|ontology_enrichment_celltype=CL:0000540!1.54e-21!33;CL:0000047!1.54e-21!33;CL:0000031!1.54e-21!33;CL:0000404!1.54e-21!33;CL:0000117!3.93e-21!23;CL:0000337!3.93e-21!23;CL:0000221!2.06e-19!44;CL:0000133!2.06e-19!44;CL:0002319!5.76e-19!43;CL:0000393!1.10e-17!39;CL:0000211!1.10e-17!39;CL:0000055!1.31e-15!50;CL:0002321!1.51e-08!70;CL:0000220!1.51e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-30,23;CL:0000337,1.54e-30,23;CL:0000540,9.21e-22,33;CL:0000047,9.21e-22,33;CL:0000031,9.21e-22,33;CL:0000404,9.21e-22,33;CL:0000393,1.38e-17,39;CL:0000211,1.38e-17,39;CL:0002319,1.86e-15,43;CL:0000221,5.50e-15,44;CL:0000133,5.50e-15,44;CL:0002321,1.53e-07,70;CL:0002609,1.64e-07,6;CL:0002613,3.38e-07,3;CL:0002612,5.40e-07,3;CL:0000120,5.66e-07,3;CL:0002610,9.39e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.15e-44!73;UBERON:0005743!5.15e-44!73;UBERON:0000073!3.14e-42!75;UBERON:0001016!3.14e-42!75;UBERON:0001049!3.26e-35!52;UBERON:0005068!3.26e-35!52;UBERON:0006241!3.26e-35!52;UBERON:0007135!3.26e-35!52;UBERON:0000955!2.95e-33!50;UBERON:0006238!2.95e-33!50;UBERON:0002616!2.10e-32!49;UBERON:0002020!3.96e-29!34;UBERON:0004121!8.70e-29!102;UBERON:0000924!8.70e-29!102;UBERON:0006601!8.70e-29!102;UBERON:0000033!2.25e-27!63;UBERON:0003080!3.99e-27!40;UBERON:0002780!3.31e-26!39;UBERON:0001890!3.31e-26!39;UBERON:0006240!3.31e-26!39;UBERON:0002791!1.41e-24!29;UBERON:0003528!1.41e-24!29;UBERON:0001893!1.41e-24!29;UBERON:0002346!3.27e-24!71;UBERON:0003075!3.27e-24!71;UBERON:0007284!3.27e-24!71;UBERON:0003056!1.26e-21!49;UBERON:0000956!1.52e-17!21;UBERON:0001869!1.52e-17!21;UBERON:0000203!1.52e-17!21;UBERON:0007811!1.82e-15!86;UBERON:0002619!3.88e-14!17;UBERON:0000153!4.20e-14!94;UBERON:0002021!5.53e-11!10;UBERON:0000411!5.53e-11!10;UBERON:0001950!5.53e-11!10;UBERON:0000025!2.43e-08!114;UBERON:0003076!2.93e-08!12;UBERON:0003057!2.93e-08!12;UBERON:0002420!4.05e-08!8;UBERON:0007245!4.05e-08!8;UBERON:0010009!4.05e-08!8;UBERON:0010011!4.05e-08!8;UBERON:0000454!4.05e-08!8;UBERON:0004111!7.31e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.54e-44,54;UBERON:0001017,1.27e-43,73;UBERON:0001016,3.26e-42,75;UBERON:0001049,7.20e-41,52;UBERON:0005068,7.20e-41,52;UBERON:0006241,7.20e-41,52;UBERON:0007135,7.20e-41,52;UBERON:0002020,4.96e-39,34;UBERON:0003080,1.12e-36,40;UBERON:0002780,5.09e-35,39;UBERON:0001890,5.09e-35,39;UBERON:0006240,5.09e-35,39;UBERON:0000955,1.39e-34,47;UBERON:0006238,1.39e-34,47;UBERON:0002346,1.37e-33,64;UBERON:0003075,1.37e-33,64;UBERON:0007284,1.37e-33,64;UBERON:0003528,3.61e-33,29;UBERON:0002791,3.61e-33,29;UBERON:0001893,3.61e-33,29;UBERON:0002616,3.79e-33,46;UBERON:0004121,2.20e-31,95;UBERON:0000924,2.20e-31,95;UBERON:0006601,2.20e-31,95;UBERON:0003056,1.40e-28,49;UBERON:0010371,2.17e-28,73;UBERON:0000956,3.81e-25,21;UBERON:0001869,3.81e-25,21;UBERON:0000203,3.81e-25,21;UBERON:0010314,9.33e-21,92;UBERON:0002619,9.27e-19,17;UBERON:0002021,5.67e-17,10;UBERON:0000411,5.67e-17,10;UBERON:0001950,5.67e-17,10;UBERON:0000025,4.63e-14,114;UBERON:0004111,1.37e-12,122;UBERON:0011216,1.48e-10,194;UBERON:0002420,5.70e-09,8;UBERON:0007245,5.70e-09,8;UBERON:0010009,5.70e-09,8;UBERON:0010011,5.70e-09,8;UBERON:0000454,5.70e-09,8;UBERON:0002240,1.48e-08,6;UBERON:0005174,1.48e-08,6;UBERON:0001137,1.48e-08,6;UBERON:0000369,2.96e-07,5;UBERON:0002435,2.96e-07,5;UBERON:0000204,2.96e-07,5;UBERON:0010082,2.96e-07,5;UBERON:0002257,5.40e-07,3;UBERON:0000483,5.52e-07,174;UBERON:0000119,8.23e-07,176;UBERON:0001948,8.48e-07,5;UBERON:0002315,8.48e-07,5;UBERON:0004684,9.39e-07,3;UBERON:0002275,9.39e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.439372365468944,0,0,0,0,0,0,0,0.286533439938757,0,2.22548106945558,4.23192783417626,2.53532561402472,0,0,0,0,0,0.599200221036809,0.768436610643109,1.24427534770173,2.16009501330705,1.89292465216244,0.571301968807607,1.76694832761291,1.83736198822431,1.34183659425531,0.919218786610021,3.30347642998166,2.55374676170375,1.68967186581868,3.03338461779446,2.56165402086747,4.16730696445408,0.837548997004143,2.25105044012672,1.5279824777681,3.24091444021034,3.70166370077668,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,1.17112318804619,0.209446706813455,0,0,0,0,2.09706895166752,0.457500602818626,3.26701315493447,2.9550134432687,4.34716277461562,1.24672826735736,2.43361894601636,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,4.21908910755066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0,1.17131623288992,0,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,0,0.395287777946524,1.28528526568723,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44048875225048,2.32845630808958,1.07168517515796,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,5.0827665835536,6.90487854760765,5.72895513439397,4.64003592327956,2.74033007908257,3.7769694869485,4.72515750162264,1.35096360967266,0.453142408984205,2.5888015587591,0,0.399024873401031,1.02440163452481,0.486213434136588,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.760437899670719,0.377252682772152,0.187283014939765,0.448176066834085,0.114870937911227,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0.715308569841963,0,0.658765662907314,0.169229215783353,0,0.263069711437843,0.543216455383447,0,0.474540072496697,0.492522411877817,0,0.464810523557898,0.385813221962283,1.49886346762768,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr13:51664540..51664561,- | |||
}} |
Latest revision as of 02:21, 6 August 2015
Short description: | p@chr13:51664540..51664561, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:51664540..51664561, - |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.54e-30 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-30 | 23 |
neuron | 9.21e-22 | 33 |
neuronal stem cell | 9.21e-22 | 33 |
neuroblast | 9.21e-22 | 33 |
electrically signaling cell | 9.21e-22 | 33 |
electrically responsive cell | 1.38e-17 | 39 |
electrically active cell | 1.38e-17 | 39 |
neural cell | 1.86e-15 | 43 |
ectodermal cell | 5.50e-15 | 44 |
neurectodermal cell | 5.50e-15 | 44 |
embryonic cell | 1.53e-07 | 70 |
neuron of cerebral cortex | 1.64e-07 | 6 |
striatum neuron | 3.38e-07 | 3 |
neuron of the ventral spinal cord | 5.40e-07 | 3 |
granule cell | 5.66e-07 | 3 |
raphe nuclei neuron | 9.39e-07 | 3 |